Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold265G46122 Striga asiatica HOM05D005260 ORTHO05D006390 2.9e-285 984.6 497 100.0
MSTRG.6120 Avicennia marina HOM05D005260 ORTHO05D006390 2.7e-158 562.8 355 79.7
Migut.J01331 Erythranthe guttata HOM05D005260 ORTHO05D006390 3.1e-154 549.3 359 78.0
SalBow1G8640 Salvia bowleyana HOM05D005260 ORTHO05D006390 9.3e-143 511.1 350 74.3
Oeu051690.1 Olea europaea HOM05D005260 ORTHO05D006390 1.2e-142 510.8 351 75.2
Oeu050475.1 Olea europaea HOM05D005260 ORTHO05D006390 8.7e-141 504.6 353 75.4
SGA_v2.0_scaffold45G17044 Striga asiatica HOM05D005260 ORTHO05D006390 5.3e-138 495.4 354 73.7
Nitab4.5_0008157g0020 Nicotiana tabacum HOM05D005260 ORTHO05D006390 9.3e-127 458.0 391 63.2
Cc06_g15200 Coffea canephora HOM05D005260 ORTHO05D006390 1.0e-125 454.5 379 65.7
Peaxi162Scf00347g00088 Petunia axillaris HOM05D005260 ORTHO05D006390 1.0e-125 454.5 390 62.6
Rhsim01G0045600 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.3e-123 447.6 402 62.4
CSS0012073 Camellia sinensis var. sinensis HOM05D005260 ORTHO05D006390 1.6e-123 447.2 386 64.2
Rhsim01G0036000 Rhododendron simsii HOM05D005260 ORTHO05D006390 2.8e-123 446.4 402 62.2
Solyc07g005340.2 Solanum lycopersicum HOM05D005260 ORTHO05D006390 2.8e-123 446.4 396 61.9
Sopen07g001450 Solanum pennellii HOM05D005260 ORTHO05D006390 3.7e-123 446.0 396 61.9
RhsimUnG0040000 Rhododendron simsii HOM05D005260 ORTHO05D006390 4.8e-123 445.7 362 66.0
PGSC0003DMG400003180 Solanum tuberosum HOM05D005260 ORTHO05D006390 6.3e-123 445.3 396 62.1
Rhsim01G0035700 Rhododendron simsii HOM05D005260 ORTHO05D006390 8.2e-123 444.9 384 63.3
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla HOM05D005260 ORTHO05D006390 5.3e-122 442.2 382 64.1
CAN.G1116.9 Capsicum annuum HOM05D005260 ORTHO05D006390 1.2e-121 441.0 396 61.6
Nitab4.5_0001201g0060 Nicotiana tabacum HOM05D005260 ORTHO05D006390 5.0e-120 435.6 378 62.4
Eucgr.C02595 Eucalyptus grandis HOM05D005260 ORTHO05D006390 2.1e-118 430.3 383 61.9
TAR625G1225 Trochodendron aralioides HOM05D005260 ORTHO05D006390 5.1e-117 425.6 383 63.2
Haze_19232 Corylus avellana HOM05D005260 ORTHO05D006390 4.3e-116 422.5 372 63.7
CiPaw.15G174600 Carya illinoinensis HOM05D005260 ORTHO05D006390 9.7e-116 421.4 375 63.5
Lalb_Chr13g0300941 Lupinus albus HOM05D005260 ORTHO05D006390 1.3e-115 421.0 374 63.4
Lsat_1_v5_gn_6_38260 Lactuca sativa HOM05D005260 ORTHO05D006390 1.6e-115 420.6 372 63.2
Cfa020845 Carpinus fangiana HOM05D005260 ORTHO05D006390 2.2e-115 420.2 372 63.4
Glyma.02G202400 Glycine max HOM05D005260 ORTHO05D006390 2.2e-115 420.2 373 61.9
QL02p092738 Quercus lobata HOM05D005260 ORTHO05D006390 3.7e-115 419.5 378 61.6
Phvul.003G157300 Phaseolus vulgaris HOM05D005260 ORTHO05D006390 4.8e-115 419.1 371 62.0
TAR383G0874 Trochodendron aralioides HOM05D005260 ORTHO05D006390 8.2e-115 418.3 386 60.9
Ca_21113_v3 Cicer arietinum L. HOM05D005260 ORTHO05D006390 2.4e-114 416.8 373 63.0
Potri.018G109800 Populus trichocarpa HOM05D005260 ORTHO05D006390 4.1e-114 416.0 378 60.8
PGR102G1636 Punica granatum HOM05D005260 ORTHO05D006390 4.1e-114 416.0 354 63.3
FAN19G1826 Fragaria x ananassa HOM05D005260 ORTHO05D006390 6.9e-114 415.2 376 63.6
FAN23G1120 Fragaria x ananassa HOM05D005260 ORTHO05D006390 6.9e-114 415.2 377 63.4
Glyma.17G075400 Glycine max HOM05D005260 ORTHO05D006390 2.6e-113 413.3 373 61.1
Psat4g008640 Pisum sativum HOM05D005260 ORTHO05D006390 3.4e-113 412.9 373 61.1
Potri.006G186900 Populus trichocarpa HOM05D005260 ORTHO05D006390 3.4e-113 412.9 377 60.2
FAN26G1108 Fragaria x ananassa HOM05D005260 ORTHO05D006390 2.2e-112 410.2 373 62.2
Sabra06G0142800 Salix brachista HOM05D005260 ORTHO05D006390 6.5e-112 408.7 355 61.1
Prupe.7G260500 Prunus persica HOM05D005260 ORTHO05D006390 1.1e-111 407.9 382 59.9
FAN28G1391 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.4e-111 407.5 373 63.0
Lj4g0015138 Lotus japonicus HOM05D005260 ORTHO05D006390 1.4e-111 407.5 358 61.2
RcHm_v2.0_Chr2g0085941 Rosa chinensis HOM05D005260 ORTHO05D006390 5.5e-111 405.6 385 61.8
Manes.14G111500 Manihot esculenta HOM05D005260 ORTHO05D006390 7.2e-111 405.2 379 59.9
Sc18g0000130 Simmondsia chinensis HOM05D005260 ORTHO05D006390 2.1e-110 403.7 390 60.3
MD15G1155100 Malus domestica HOM05D005260 ORTHO05D006390 2.7e-110 403.3 382 59.4
Sabra06G0141800 Salix brachista HOM05D005260 ORTHO05D006390 4.6e-110 402.5 353 61.2
FvH4_1g01150 Fragaria vesca HOM05D005260 ORTHO05D006390 6.1e-110 402.1 378 61.6
TPR.G9269 Trifolium pratense HOM05D005260 ORTHO05D006390 1.0e-109 401.4 373 59.8
Duzib168G1964 Durio zibethinus HOM05D005260 ORTHO05D006390 3.0e-109 399.8 350 63.4
Ciclev10008691m.g Citrus clementina HOM05D005260 ORTHO05D006390 6.7e-109 398.7 373 59.8
CsaV3_1G028770 Cucumis sativus L. HOM05D005260 ORTHO05D006390 1.1e-108 397.9 389 56.8
Thecc.09G033300 Theobroma cacao HOM05D005260 ORTHO05D006390 1.1e-108 397.9 354 62.7
HanXRQChr13g0397631 Helianthus annuus HOM05D005260 ORTHO05D006390 1.5e-108 397.5 377 59.7
MELO3C010238.2 Cucumis melo HOM05D005260 ORTHO05D006390 2.6e-108 396.7 389 57.1
Duzib150G0891 Durio zibethinus HOM05D005260 ORTHO05D006390 2.6e-108 396.7 362 62.2
Gohir.A13G184700 Gossypium hirsutum HOM05D005260 ORTHO05D006390 1.3e-107 394.4 348 62.9
VMungo1215G1942 Vigna mungo HOM05D005260 ORTHO05D006390 1.7e-107 394.0 368 59.5
Gohir.D13G191100 Gossypium hirsutum HOM05D005260 ORTHO05D006390 2.2e-107 393.7 348 62.4
Gorai.013G217000 Gossypium raimondii HOM05D005260 ORTHO05D006390 2.2e-107 393.7 348 62.4
Sabra18G0092700 Salix brachista HOM05D005260 ORTHO05D006390 2.2e-107 393.7 381 58.3
Actinidia04287 Actinidia chinensis HOM05D005260 ORTHO05D006390 4.8e-107 392.5 371 59.3
Sed0012515 Sechium edule HOM05D005260 ORTHO05D006390 2.4e-106 390.2 389 58.4
Medtr4g131190 Medicago truncatula HOM05D005260 ORTHO05D006390 9.1e-106 388.3 363 59.2
TWI34G1822 Tripterygium wilfordii HOM05D005260 ORTHO05D006390 9.1e-106 388.3 384 56.8
ClCG06G015480 Citrullus lanatus HOM05D005260 ORTHO05D006390 2.0e-105 387.1 389 56.3
PSO170G6608 Papaver somniferum HOM05D005260 ORTHO05D006390 2.6e-105 386.7 397 56.2
PSO017G5909 Papaver somniferum HOM05D005260 ORTHO05D006390 2.9e-104 383.3 397 55.7
Atru.chr6.1391 Acer truncatum HOM05D005260 ORTHO05D006390 5.5e-103 379.0 365 59.7
Atru.chr7.58 Acer truncatum HOM05D005260 ORTHO05D006390 5.5e-103 379.0 365 59.7
Cpa.g.sc46.130 Carica papaya HOM05D005260 ORTHO05D006390 9.4e-103 378.3 364 60.2
GSVIVG01023592001 Vitis vinifera HOM05D005260 ORTHO05D006390 1.6e-102 377.5 351 62.4
Gorai.006G273400 Gossypium raimondii HOM05D005260 ORTHO05D006390 2.7e-102 376.7 324 63.3
AT5G58020 Arabidopsis thaliana HOM05D005260 ORTHO05D006390 3.6e-102 376.3 353 61.2
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 7.9e-102 375.2 338 62.1
AL8G34120 Arabidopsis lyrata HOM05D005260 ORTHO05D006390 2.6e-100 370.2 354 60.5
Thhalv10013961m.g Eutrema salsugineum HOM05D005260 ORTHO05D006390 3.3e-100 369.8 355 60.0
BcaB05g22395 Brassica carinata HOM05D005260 ORTHO05D006390 4.4e-100 369.4 351 60.4
ATR0739G050 Amborella trichopoda HOM05D005260 ORTHO05D006390 1.3e-99 367.9 392 55.4
Lj7P455T24 Lonicera japonica HOM05D005260 ORTHO05D006390 1.3e-99 367.9 310 63.9
A10p16150 Brassica napus HOM05D005260 ORTHO05D006390 2.8e-99 366.7 353 59.8
BraA10t43614Z Brassica rapa HOM05D005260 ORTHO05D006390 2.8e-99 366.7 353 59.8
BcaC04g19916 Brassica carinata HOM05D005260 ORTHO05D006390 3.7e-99 366.3 353 59.8
CARHR271830 Cardamine hirsuta HOM05D005260 ORTHO05D006390 3.7e-99 366.3 354 59.3
C09p49880 Brassica napus HOM05D005260 ORTHO05D006390 4.8e-99 365.9 353 59.8
BolC2t07483H Brassica oleracea HOM05D005260 ORTHO05D006390 4.8e-99 365.9 351 60.1
A02p08050 Brassica napus HOM05D005260 ORTHO05D006390 6.3e-99 365.5 354 59.6
Sp6g19700 Schrenkiella parvula HOM05D005260 ORTHO05D006390 8.2e-99 365.2 353 58.6
BolC9t57839H Brassica oleracea HOM05D005260 ORTHO05D006390 1.8e-98 364.0 353 59.5
Ah.11g045050 Amaranthus hybridus HOM05D005260 ORTHO05D006390 4.1e-98 362.8 369 56.9
BraA02t05877Z Brassica rapa HOM05D005260 ORTHO05D006390 4.1e-98 362.8 351 60.4
Carub.0008s1857 Capsella rubella HOM05D005260 ORTHO05D006390 7.0e-98 362.1 350 58.9
Aa31LG3G13860 Aethionema arabicum HOM05D005260 ORTHO05D006390 2.6e-97 360.1 360 58.3
MBI14_g37102_MAGBIO Magnolia biondii HOM05D005260 ORTHO05D006390 5.9e-97 359.0 387 54.8
C02p13690 Brassica napus HOM05D005260 ORTHO05D006390 6.5e-96 355.5 351 59.5
THA.LOC104817828 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 1.1e-95 354.8 349 57.9
SHI04751 Sapria himalayana HOM05D005260 ORTHO05D006390 4.2e-95 352.8 371 54.4
COL.COLO4_18779 Corchorus olitorius HOM05D005260 ORTHO05D006390 4.7e-94 349.4 348 57.8
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 8.0e-94 348.6 400 52.2
EL10Ac8g18850 Beta vulgaris HOM05D005260 ORTHO05D006390 2.6e-92 343.6 386 51.8
Os06g0183900 Oryza sativa ssp. japonica HOM05D005260 ORTHO05D006390 3.7e-91 339.7 364 53.6
Aqoxy3G00834 Aquilegia oxysepala HOM05D005260 ORTHO05D006390 6.3e-91 339.0 352 57.1
DCAR_020883 Daucus carota HOM05D005260 ORTHO05D006390 8.8e-85 318.5 276 63.4
Dinv42879 Davidia involucrata HOM05D005260 ORTHO05D006390 8.3e-83 312.0 336 55.7
Dinv43221 Davidia involucrata HOM05D005260 ORTHO05D006390 8.3e-83 312.0 336 55.7
Pp3c14_10930 Physcomitrium patens HOM05D005260 ORTHO05D006390 8.3e-83 312.0 355 50.4
SMO307G0072 Selaginella moellendorffii HOM05D005260 ORTHO05D006390 4.5e-81 306.2 298 56.0
AUR62031434 Chenopodium quinoa HOM05D005260 ORTHO05D006390 6.5e-80 302.4 315 53.0
SEGI_13576 Sequoiadendron giganteum HOM05D005260 ORTHO05D006390 2.5e-79 300.4 380 48.2
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis HOM05D005260 ORTHO05D006390 9.5e-79 298.5 292 55.1
Gohir.D09G249000 Gossypium hirsutum HOM05D005260 ORTHO05D006390 3.1e-74 283.5 259 61.0
Mapoly0043s0023 Marchantia polymorpha HOM05D005260 ORTHO05D006390 3.1e-74 283.5 350 48.6
CiPaw.16G114800 Carya illinoinensis HOM05D005260 ORTHO05D006390 9.2e-74 282.0 326 51.8
unitig_0.g2819 Utricularia gibba HOM05D005260 ORTHO05D006390 1.4e-69 268.1 193 72.0
AUR62021106 Chenopodium quinoa HOM05D005260 ORTHO05D006390 5.2e-69 266.2 241 56.8
Actinidia38337 Actinidia chinensis HOM05D005260 ORTHO05D006390 3.3e-63 246.9 169 71.0
CBR_g44540 Chara braunii HOM05D005260 ORTHO05D006390 4.7e-62 243.0 354 41.2
Gohir.D07G030400 Gossypium hirsutum HOM05D005260 ORTHO05D006390 2.0e-60 237.7 263 53.6
Gorai.001G031600 Gossypium raimondii HOM05D005260 ORTHO05D006390 4.4e-60 236.5 263 53.2
HPP92_018747 Vanilla planifolia HOM05D005260 ORTHO05D006390 5.8e-44 183.0 181 58.0
Lalb_Chr12g0198621 Lupinus albus HOM05D005260 ORTHO05D006390 1.0e-40 172.2 189 55.6
CDE02G0414 Ceratophyllum demersum HOM05D005260 ORTHO05D006390 6.6e-40 169.5 359 38.2
Cre03.g150650 Chlamydomonas reinhardtii HOM05D005260 ORTHO05D006390 1.5e-39 168.3 354 35.6
HPP92_018748 Vanilla planifolia HOM05D005260 ORTHO05D006390 1.7e-32 144.8 136 55.1
AagrBONN_evm.TU.Sc2ySwM_344.4069 Anthoceros agrestis HOM05D005260 ORTHO05D006390 6.6e-32 142.9 162 53.1
PRCOL_00003864 Prasinoderma coloniale HOM05D005260 ORTHO05D006390 6.2e-30 136.3 290 35.2
HanXRQChr09g0262911 Helianthus annuus HOM05D005260 ORTHO05D006390 6.9e-29 132.9 83 75.9
Atru.chr13.1961 Acer truncatum HOM05D005260 ORTHO05D006390 2.3e-24 117.9 150 53.3
MELO3C004727.2 Cucumis melo HOM05D005260 ORTHO05D006390 3.9e-24 117.1 84 67.9
TAR625G0635 Trochodendron aralioides HOM05D005260 ORTHO05D006390 1.1e-21 109.0 140 54.3
ATR0579G027 Amborella trichopoda HOM05D005260 ORTHO05D006390 2.9e-19 100.9 118 50.8
Zm00001eb158280 Zea mays HOM05D005260 ORTHO05D006390 1.3e-16 92.0 102 48.0
unitig_747.g21900 Utricularia gibba HOM05D005260 ORTHO05D006390 3.9e-16 90.5 84 63.1
unitig_0.g2818 Utricularia gibba HOM05D002170 ORTHO05D005003 4.0e-13 80.5 80 56.2
ClCG06G012260 Citrullus lanatus HOM05D005260 ORTHO05D006390 2.2e-11 74.7 57 64.9
MCO05G557 Micromonas commoda HOM05D005260 ORTHO05D006390 1.9e-10 71.6 244 25.4
BolC3t13905H Brassica oleracea HOM05D005260 ORTHO05D006390 9.3e-10 69.3 48 75.0
CiPaw.12G098000 Carya illinoinensis HOM05D003547 ORTHO05D004236 2.3e-08 64.7 50 58.0
Cfa026666 Carpinus fangiana HOM05D005260 ORTHO05D006390 1.3e-06 58.9 276 27.2


User provided reference genes

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