Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 3.6e-109 398.3 206 100.0
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 2.1e-77 292.7 212 71.7
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 9.0e-76 287.3 217 69.6
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 4.5e-75 285.0 212 69.8
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 5.3e-68 261.5 224 61.6
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 9.1e-68 260.8 224 61.6
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 2.0e-67 259.6 218 61.5
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 1.0e-66 257.3 226 60.6
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 1.7e-66 256.5 224 61.6
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 1.7e-66 256.5 219 63.0
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 5.0e-66 255.0 224 61.2
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 1.1e-65 253.8 218 61.0
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 3.2e-65 252.3 215 62.3
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 3.2e-65 252.3 217 60.8
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 3.2e-65 252.3 218 60.1
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 4.2e-65 251.9 224 60.7
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 9.4e-65 250.8 210 62.9
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 1.6e-64 250.0 212 61.8
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 1.6e-64 250.0 227 59.0
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 2.7e-64 249.2 217 59.4
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 4.6e-64 248.4 219 58.4
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 4.6e-64 248.4 229 59.8
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 1.4e-63 246.9 212 61.3
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 1.4e-63 246.9 228 58.3
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 2.3e-63 246.1 224 58.5
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 3.0e-63 245.7 224 57.6
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 3.0e-63 245.7 219 59.8
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 3.9e-63 245.4 216 58.8
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 1.5e-62 243.4 218 59.2
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 2.0e-62 243.0 224 57.1
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.0e-62 243.0 212 60.8
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 3.3e-62 242.3 224 57.6
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 3.3e-62 242.3 207 62.8
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 4.4e-62 241.9 226 56.6
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 4.4e-62 241.9 224 57.6
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 5.7e-62 241.5 221 56.1
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 5.7e-62 241.5 224 56.7
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 7.4e-62 241.1 226 56.6
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 9.7e-62 240.7 220 57.7
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 9.7e-62 240.7 218 58.3
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 9.7e-62 240.7 224 58.0
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 1.3e-61 240.4 226 57.5
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 2.8e-61 239.2 224 57.6
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 3.7e-61 238.8 218 57.8
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 6.3e-61 238.0 210 59.5
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 8.2e-61 237.7 223 56.1
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 8.2e-61 237.7 216 57.9
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 1.1e-60 237.3 223 56.1
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 1.1e-60 237.3 220 57.7
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 1.4e-60 236.9 220 57.3
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 1.8e-60 236.5 224 54.9
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 1.8e-60 236.5 222 56.3
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 3.1e-60 235.7 224 55.8
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 3.1e-60 235.7 225 56.4
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 5.3e-60 235.0 224 54.5
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 6.9e-60 234.6 218 57.8
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 9.1e-60 234.2 223 55.6
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 1.2e-59 233.8 213 58.7
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 2.6e-59 232.6 221 55.7
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 4.5e-59 231.9 206 59.2
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 4.5e-59 231.9 220 55.9
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 5.9e-59 231.5 217 57.6
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 5.9e-59 231.5 206 60.7
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 5.9e-59 231.5 213 57.3
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 1.0e-58 230.7 220 56.8
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 1.7e-58 229.9 220 56.4
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 3.8e-58 228.8 216 57.4
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 5.0e-58 228.4 220 54.5
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 1.1e-57 227.3 224 54.9
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 1.1e-57 227.3 215 57.7
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 1.4e-57 226.9 223 54.7
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 1.9e-57 226.5 223 54.3
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 2.5e-57 226.1 218 55.5
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 2.5e-57 226.1 218 56.4
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 7.2e-57 224.6 216 56.9
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 1.2e-56 223.8 221 54.3
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 2.1e-56 223.0 282 49.3
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 2.7e-56 222.6 209 57.4
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 4.7e-56 221.9 212 57.5
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 6.1e-56 221.5 229 54.1
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 8.8e-55 217.6 245 50.6
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 4.4e-54 215.3 227 55.9
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 9.7e-54 214.2 207 56.5
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 6.3e-53 211.5 207 54.6
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 7.0e-52 208.0 209 55.0
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 7.7e-51 204.5 212 52.8
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 1.3e-50 203.8 211 51.7
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 1.7e-50 203.4 211 51.7
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.9e-49 199.9 217 52.1
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 5.5e-49 198.4 206 53.9
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 1.6e-48 196.8 224 51.8
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 2.3e-47 193.0 193 53.9
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 6.7e-47 191.4 214 52.8
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 1.5e-46 190.3 211 51.2
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 5.7e-46 188.3 222 48.6
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 8.2e-45 184.5 227 47.1
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 2.4e-44 183.0 221 48.0
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 3.1e-44 182.6 233 46.8
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 4.1e-44 182.2 220 47.7
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 7.0e-44 181.4 228 45.2
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 3.8e-42 175.6 164 61.6
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 1.5e-41 173.7 206 48.5
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.9e-41 173.3 223 43.9
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 1.2e-38 164.1 206 47.1
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.2e-38 164.1 158 53.8
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.5e-38 163.7 211 42.7
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 9.8e-38 161.0 184 50.5
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 8.3e-37 157.9 158 53.8
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 1.5e-33 147.1 159 52.2
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 2.1e-32 143.3 95 77.9
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 8.9e-31 137.9 267 33.3
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 5.9e-27 125.2 89 66.3
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 8.6e-26 121.3 88 64.8
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 9.5e-25 117.9 176 41.5
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 4.7e-24 115.5 87 63.2
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 4.7e-24 115.5 126 49.2
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 2.6e-22 109.8 206 34.5
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.2e-21 106.7 107 48.6
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.2e-19 100.9 74 70.3
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 1.7e-18 97.1 267 28.8
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 2.5e-17 93.2 91 53.8
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 7.3e-17 91.7 91 51.6
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 2.1e-16 90.1 91 51.6
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 3.1e-15 86.3 149 37.6
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.1e-15 86.3 149 37.6
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 4.0e-15 85.9 91 50.5
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 4.4e-14 82.4 196 31.1
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 9.8e-14 81.3 63 66.7
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 5.4e-12 75.5 85 49.4
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.0e-10 69.7 56 57.1
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 8.6e-10 68.2 65 58.5
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 2.5e-09 66.6 77 42.9
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 1.6e-08 63.9 54 57.4
SGA_v2.0_scaffold100G29569 Striga asiatica HOM05D005809 ORTHO05D007259 3.6e-08 62.8 81 51.9


User provided reference genes

Program Settings