Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold265G46102 Striga asiatica HOM05D014413 ORTHO05D035171 3.3e-108 395.2 218 100.0
SGA_v2.0_scaffold45G17026 Striga asiatica HOM05D014413 ORTHO05D035171 2.3e-21 106.7 88 55.7
Migut.J01355 Erythranthe guttata HOM05D014413 ORTHO05D035171 3.2e-15 86.3 75 52.0
SGA_v2.0_scaffold12G06008 Striga asiatica HOM05D014413 ORTHO05D400594 8.5e-08 61.6 76 39.5
SGA_v2.0_scaffold12G06011 Striga asiatica HOM05D014413 ORTHO05D001012 1.1e-07 61.2 71 40.8
QL10p038692 Quercus lobata HOM05D001231 ORTHO05D001012 4.2e-07 59.3 79 41.8
FAN16G3645 Fragaria x ananassa HOM05D001231 ORTHO05D001012 7.2e-07 58.5 79 41.8
COL.COLO4_16210 Corchorus olitorius HOM05D001231 ORTHO05D001012 9.4e-07 58.2 77 44.2
FAN11G1290 Fragaria x ananassa HOM05D001231 ORTHO05D001012 9.4e-07 58.2 79 41.8
arahy.Tifrunner.gnm1.ann1.UPL4LC Arachis hypogaea HOM05D001231 ORTHO05D001012 1.6e-06 57.4 78 38.5
CiPaw.04G178300 Carya illinoinensis HOM05D001231 ORTHO05D001012 1.6e-06 57.4 79 43.0
Manes.07G074400 Manihot esculenta HOM05D001231 ORTHO05D001012 1.6e-06 57.4 79 41.8
Os02g0172000 Oryza sativa ssp. japonica HOM05D001231 ORTHO05D001012 1.6e-06 57.4 69 42.0
FAN21G1429 Fragaria x ananassa HOM05D020793 ORTHO05D025367 2.1e-06 57.0 182 28.0
Phvul.002G278700 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 2.1e-06 57.0 79 41.8
Potri.T011200 Populus trichocarpa HOM05D001231 ORTHO05D001012 2.1e-06 57.0 79 41.8
Potri.T011201 Populus trichocarpa HOM05D001231 ORTHO05D001012 2.1e-06 57.0 79 41.8
CSS0011856 Camellia sinensis var. sinensis HOM05D001231 ORTHO05D001012 2.7e-06 56.6 81 46.9
FvH4_3g14620 Fragaria vesca HOM05D001231 ORTHO05D001012 2.7e-06 56.6 79 43.0
Glyma.06G160400 Glycine max HOM05D001231 ORTHO05D001012 2.7e-06 56.6 78 38.5
TWI75G0548 Tripterygium wilfordii HOM05D001231 ORTHO05D001012 2.7e-06 56.6 78 42.3
Manes.05G122400 Manihot esculenta HOM05D001231 ORTHO05D001012 3.6e-06 56.2 79 41.8
CSS0006682 Camellia sinensis var. sinensis HOM05D001231 ORTHO05D001012 4.7e-06 55.8 78 46.2
FvH4_3g14600 Fragaria vesca HOM05D001231 ORTHO05D001012 4.7e-06 55.8 79 40.5
Medtr3g097420 Medicago truncatula HOM05D001231 ORTHO05D001012 4.7e-06 55.8 78 39.7
Duzib268G0537 Durio zibethinus HOM05D001231 ORTHO05D001012 8.0e-06 55.1 79 43.0
Nn7g38191 Nelumbo nucifera HOM05D001231 ORTHO05D001012 8.0e-06 55.1 80 42.5
Phvul.009G158101 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 8.0e-06 55.1 78 38.5


User provided reference genes

Program Settings