Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 9.9e-195 683.3 359 100.0
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 9.4e-129 464.2 393 67.4
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 8.5e-114 414.5 387 58.9
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 2.0e-94 350.1 380 51.3
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 1.2e-91 340.9 387 49.4
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 6.0e-91 338.6 383 49.9
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 3.0e-90 336.3 405 48.1
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 6.6e-90 335.1 392 50.3
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 8.6e-90 334.7 383 49.9
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 1.1e-89 334.3 356 52.2
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 2.5e-89 333.2 374 50.3
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 4.3e-89 332.4 390 51.5
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 4.3e-89 332.4 424 47.9
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 1.2e-88 330.9 381 48.6
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 1.6e-88 330.5 374 49.2
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 2.9e-85 319.7 380 46.6
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 3.7e-85 319.3 297 57.6
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 3.7e-85 319.3 387 46.5
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 3.7e-85 319.3 295 57.3
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 2.4e-84 316.6 294 56.1
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 3.5e-83 312.8 319 51.4
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 3.5e-83 312.8 308 54.5
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 3.5e-83 312.8 305 55.1
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 6.0e-83 312.0 374 47.1
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 2.3e-82 310.1 376 48.9
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 3.0e-82 309.7 295 55.3
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.5e-81 307.4 315 52.7
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 3.3e-81 306.2 376 47.3
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 9.5e-81 304.7 296 54.4
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 4.7e-80 302.4 296 54.1
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 1.5e-78 297.4 356 46.9
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 5.8e-78 295.4 296 52.7
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 7.5e-78 295.0 294 52.4
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 4.9e-77 292.4 300 52.0
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 4.9e-77 292.4 302 53.0
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 6.4e-77 292.0 392 43.4
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 6.4e-77 292.0 300 51.3
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 8.3e-77 291.6 397 42.8
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 8.3e-77 291.6 370 44.9
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 8.3e-77 291.6 342 48.2
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 1.1e-76 291.2 341 46.9
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 4.1e-76 289.3 296 51.7
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 1.2e-75 287.7 375 44.0
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 2.1e-75 287.0 294 51.4
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 1.0e-74 284.6 399 43.1
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 3.9e-74 282.7 294 48.6
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 4.3e-73 279.3 374 44.7
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 4.3e-73 279.3 271 54.6
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 7.3e-73 278.5 302 51.3
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 1.6e-72 277.3 290 51.0
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 2.8e-72 276.6 438 39.3
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 4.7e-72 275.8 293 50.9
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 8.1e-72 275.0 374 42.2
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 8.1e-72 275.0 374 42.2
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 2.0e-70 270.4 341 49.3
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 2.6e-70 270.0 389 39.6
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 1.3e-69 267.7 295 48.5
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 4.9e-69 265.8 383 42.0
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 2.4e-68 263.5 392 40.1
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 7.1e-68 261.9 384 41.1
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 1.2e-67 261.2 360 43.3
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 1.2e-67 261.2 301 46.8
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 2.7e-67 260.0 282 49.3
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 1.0e-66 258.1 463 38.4
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 1.3e-66 257.7 372 41.1
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 2.3e-66 256.9 313 45.4
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 3.9e-66 256.1 317 44.8
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 3.9e-66 256.1 381 40.7
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 5.1e-66 255.8 290 46.2
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 8.7e-66 255.0 403 39.0
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 1.9e-65 253.8 295 48.5
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 9.6e-65 251.5 385 39.5
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 9.6e-65 251.5 292 46.9
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 2.8e-64 250.0 375 40.5
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 6.2e-64 248.8 293 46.1
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 6.9e-63 245.4 291 46.4
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 9.0e-63 245.0 386 37.8
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 3.4e-62 243.0 385 38.2
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 5.8e-62 242.3 361 39.3
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 7.1e-60 235.3 295 46.4
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 4.6e-59 232.6 334 41.3
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 4.6e-59 232.6 371 38.5
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 3.9e-58 229.6 377 37.4
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 2.5e-57 226.9 295 45.1
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 2.5e-57 226.9 380 38.2
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 4.8e-56 222.6 243 49.4
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 1.1e-55 221.5 363 41.0
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 2.0e-54 217.2 395 37.0
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 3.4e-54 216.5 183 57.4
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 4.2e-52 209.5 173 59.5
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 4.6e-51 206.1 164 59.1
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 1.3e-50 204.5 226 47.8
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 6.7e-50 202.2 228 46.5
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 1.6e-48 197.6 250 44.0
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 5.8e-46 189.1 141 63.1
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.7e-45 187.6 234 46.6
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.7e-45 187.6 234 46.6
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 7.4e-33 145.6 211 42.2
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 3.3e-25 120.2 178 43.3
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 3.8e-21 106.7 181 41.4
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 3.2e-20 103.6 91 51.6
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 3.2e-20 103.6 91 51.6
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 7.2e-20 102.4 261 28.7
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 3.6e-19 100.1 87 62.1
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 2.0e-17 94.4 84 58.3
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 7.0e-15 85.9 102 50.0
Mapoly0056s0109 Marchantia polymorpha HOM05D007038 ORTHO05D008893 1.4e-10 71.6 216 22.7
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 4.1e-07 60.1 59 50.8
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 7.7e-06 55.8 83 41.0


User provided reference genes

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