Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 2.8e-216 755.0 377 100.0
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 2.1e-163 579.3 363 80.2
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 1.4e-159 566.6 365 79.2
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 5.6e-132 474.9 367 67.0
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 9.5e-132 474.2 367 66.5
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 2.1e-131 473.0 367 66.5
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 4.4e-129 465.3 385 64.7
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 5.4e-127 458.4 379 63.3
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 5.1e-125 451.8 385 63.1
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 6.6e-125 451.4 364 64.0
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 6.6e-125 451.4 364 64.0
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 4.3e-124 448.7 372 66.1
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 6.4e-120 434.9 372 61.0
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 6.4e-120 434.9 372 61.0
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 7.1e-119 431.4 384 60.2
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 6.0e-118 428.3 372 60.2
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 1.0e-117 427.6 364 59.9
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 1.5e-116 423.7 371 60.4
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 1.5e-116 423.7 377 59.4
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.6e-115 419.1 370 60.0
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.2e-115 418.3 370 59.5
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 8.1e-115 417.9 372 57.5
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-114 416.8 367 60.5
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 5.3e-114 415.2 384 59.1
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 1.5e-113 413.7 372 58.6
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 3.4e-113 412.5 375 57.9
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 3.8e-112 409.1 379 57.0
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 2.4e-111 406.4 369 58.3
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 5.4e-111 405.2 364 58.5
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 1.2e-110 404.1 369 57.2
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 2.1e-110 403.3 376 57.2
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 3.5e-110 402.5 369 56.6
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 3.5e-110 402.5 367 57.8
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 1.0e-109 401.0 372 57.3
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 1.0e-109 401.0 371 57.4
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.3e-109 400.6 371 56.1
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 2.3e-109 399.8 370 55.1
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 3.0e-109 399.4 380 56.1
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 3.9e-109 399.1 372 55.9
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 8.7e-109 397.9 402 54.5
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 8.7e-109 397.9 373 56.0
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 1.9e-108 396.7 371 57.1
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 2.5e-108 396.4 373 57.4
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 5.6e-108 395.2 376 54.8
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 1.3e-107 394.0 373 55.8
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 1.6e-107 393.7 363 57.3
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.1e-107 393.3 356 58.7
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 4.8e-107 392.1 366 57.7
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 1.8e-106 390.2 366 57.4
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 3.1e-106 389.4 377 58.1
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 6.9e-106 388.3 371 56.3
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 3.4e-105 386.0 375 55.7
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 4.5e-105 385.6 381 57.2
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 1.3e-104 384.0 365 55.9
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 2.2e-104 383.3 376 53.5
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 4.9e-104 382.1 372 54.0
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 8.4e-104 381.3 376 51.3
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 1.1e-103 380.9 373 53.9
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.1e-103 380.9 369 55.6
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.1e-103 380.9 369 55.8
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 1.4e-103 380.6 373 55.5
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 1.4e-103 380.6 379 55.9
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 1.4e-103 380.6 379 55.9
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 1.4e-103 380.6 371 52.0
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.9e-103 380.2 381 54.1
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 5.5e-103 378.6 373 53.9
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 7.1e-103 378.3 368 54.3
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 7.1e-103 378.3 369 55.6
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 9.3e-103 377.9 373 53.9
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 9.3e-103 377.9 364 53.6
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.2e-102 377.5 370 56.5
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.2e-102 377.5 369 55.3
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 1.2e-102 377.5 372 53.5
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 1.6e-102 377.1 371 53.9
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 2.1e-102 376.7 364 54.1
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 2.3e-101 373.2 368 54.3
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 2.5e-100 369.8 373 53.1
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 3.3e-100 369.4 349 55.0
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 4.3e-100 369.0 379 53.3
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 3.4e-97 359.4 371 52.3
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.9e-96 356.3 366 54.9
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 1.4e-95 354.0 369 52.3
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 1.9e-95 353.6 395 48.9
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 4.2e-95 352.4 349 54.4
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 4.6e-94 349.0 351 53.3
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 7.9e-94 348.2 348 52.9
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 3.9e-93 345.9 351 53.3
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 3.9e-93 345.9 379 49.9
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 5.1e-93 345.5 351 53.3
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 2.5e-92 343.2 365 50.4
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 6.9e-90 335.1 372 49.7
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 2.0e-89 333.6 354 51.4
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 2.7e-86 323.2 352 48.9
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 9.7e-84 314.7 264 59.8
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 5.3e-82 308.9 252 61.5
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 7.7e-81 305.1 375 47.7
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 3.7e-75 286.2 363 46.6
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 3.5e-65 253.1 320 44.4
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 3.5e-65 253.1 370 41.1
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 6.5e-64 248.8 179 67.6
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 4.2e-63 246.1 242 54.5
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 2.9e-56 223.4 218 52.3
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 6.1e-54 215.7 243 49.0
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 3.4e-52 209.9 152 68.4
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 3.7e-51 206.5 327 39.4
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 1.8e-50 204.1 389 34.2
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.8e-50 204.1 216 50.9
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.7e-49 198.7 208 51.9
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.2e-48 197.2 208 51.9
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 2.6e-44 183.7 152 55.9
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.8e-44 181.8 207 47.8
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-42 178.3 124 71.0
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 3.1e-42 176.8 212 50.9
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 6.6e-40 169.1 404 30.0
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 1.7e-35 154.5 255 39.6
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.4e-28 129.8 216 40.3
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 4.1e-26 123.2 183 38.8
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.8e-25 119.0 65 87.7
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.5e-23 112.1 65 81.5
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-18 98.6 65 75.4
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 1.8e-13 81.3 109 44.0
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 2.0e-12 77.8 52 65.4
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 9.9e-12 75.5 53 66.0
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 9.9e-12 75.5 53 66.0
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 9.9e-12 75.5 53 66.0
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 3.8e-11 73.6 52 65.4
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 4.9e-11 73.2 68 52.9
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 3.2e-10 70.5 162 30.2
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 3.3e-07 60.5 49 59.2
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 3.3e-07 60.5 49 59.2
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 3.3e-07 60.5 49 59.2
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 3.3e-07 60.5 49 59.2


User provided reference genes

Program Settings