Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold265G46060 Striga asiatica HOM05D008208 ORTHO05D010143 0.0e+00 1128.2 723 100.0
MSTRG.11020 Avicennia marina HOM05D008208 ORTHO05D010143 1.7e-44 185.3 744 36.4
SalBow2G3317 Salvia bowleyana HOM05D008208 ORTHO05D010143 5.7e-32 143.7 772 33.2
Oeu002526.1 Olea europaea HOM05D008208 ORTHO05D010143 5.1e-25 120.6 790 25.4
Migut.I00959 Erythranthe guttata HOM05D008208 ORTHO05D010143 1.3e-20 105.9 409 34.7
Duzib192G1063 Durio zibethinus HOM05D008208 ORTHO05D010143 2.5e-19 101.7 276 34.8
Oeu024259.1 Olea europaea HOM05D008208 ORTHO05D010143 3.2e-19 101.3 349 34.4
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 4.2e-19 100.9 312 33.3
Actinidia39131 Actinidia chinensis HOM05D008208 ORTHO05D010143 7.2e-19 100.1 763 32.6
Ciclev10025127m.g Citrus clementina HOM05D008208 ORTHO05D010143 2.6e-16 91.7 747 27.0
CSS0033280 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 1.3e-15 89.4 777 24.5
Lj9A514T51 Lonicera japonica HOM05D008208 ORTHO05D010143 2.2e-15 88.6 758 24.0
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 4.8e-15 87.4 295 32.9
QL05p019674 Quercus lobata HOM05D008208 ORTHO05D010143 8.2e-15 86.7 812 25.6
CSS0036998 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 2.4e-14 85.1 777 24.5
Gorai.011G070600 Gossypium raimondii HOM05D008208 ORTHO05D010143 2.4e-14 85.1 280 35.0
Gohir.D10G066500 Gossypium hirsutum HOM05D008208 ORTHO05D010143 7.0e-14 83.6 280 34.6
Actinidia09010 Actinidia chinensis HOM05D008208 ORTHO05D010143 9.1e-14 83.2 760 25.8
Lj5A52T19 Lonicera japonica HOM05D008208 ORTHO05D010143 9.1e-14 83.2 757 24.4
COL.COLO4_30526 Corchorus olitorius HOM05D008208 ORTHO05D010143 1.5e-13 82.4 242 31.4
TWI18G0382 Tripterygium wilfordii HOM05D008208 ORTHO05D010143 1.5e-13 82.4 153 39.9
RcHm_v2.0_Chr2g0140801 Rosa chinensis HOM05D008208 ORTHO05D010143 1.0e-12 79.7 142 40.1
Sabra01G0150900 Salix brachista HOM05D008208 ORTHO05D010143 5.0e-12 77.4 338 28.4
TAR639G0001 Trochodendron aralioides HOM05D008208 ORTHO05D010143 5.0e-12 77.4 776 25.5
Potri.001G190601 Populus trichocarpa HOM05D008208 ORTHO05D010143 8.5e-12 76.6 146 41.8
GSVIVG01016967001 Vitis vinifera HOM05D000585 ORTHO05D001841 8.5e-12 76.6 827 26.7
Manes.11G032600 Manihot esculenta HOM05D008208 ORTHO05D010143 2.5e-11 75.1 790 26.6
HanXRQChr09g0275691 Helianthus annuus HOM05D008208 ORTHO05D010143 5.5e-11 73.9 230 34.3
Peaxi162Scf00038g01129 Petunia axillaris HOM05D008208 ORTHO05D010143 3.6e-10 71.2 752 25.7
Sc10g0007610 Simmondsia chinensis HOM05D008208 ORTHO05D010143 6.1e-10 70.5 261 32.6
vmacro17009 Vaccinium macrocarpon HOM05D008208 ORTHO05D010143 1.8e-09 68.9 775 24.3
Prupe.3G057400 Prunus persica HOM05D008208 ORTHO05D010143 3.0e-09 68.2 161 36.0
EL10Ac9g21199 Beta vulgaris HOM05D008208 ORTHO05D010143 6.7e-09 67.0 155 35.5
CiPaw.02G145300 Carya illinoinensis HOM05D008208 ORTHO05D010143 6.7e-09 67.0 825 24.1
Solyc03g121080.3 Solanum lycopersicum HOM05D008208 ORTHO05D010143 6.7e-09 67.0 759 24.8
CANSAT56G0900 Cannabis sativa HOM05D008208 ORTHO05D010143 1.5e-08 65.9 152 38.2
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 1.5e-08 65.9 774 24.8
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 3.3e-08 64.7 164 34.8
Thecc.06G101100 Theobroma cacao HOM05D008208 ORTHO05D010143 5.7e-08 63.9 283 28.6
Lsat_1_v5_gn_5_134320 Lactuca sativa HOM05D008208 ORTHO05D010143 7.4e-08 63.5 131 34.4
PSO210G2837 Papaver somniferum HOM05D029104 ORTHO05D010143 7.4e-08 63.5 164 34.1
Aqoxy1G02129 Aquilegia oxysepala HOM05D057169 ORTHO05D010143 9.7e-08 63.2 105 41.9
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 9.7e-08 63.2 136 39.0
Cc04_g02470 Coffea canephora HOM05D008208 ORTHO05D010143 1.7e-07 62.4 888 22.4
MBI04_g07011_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 1.1e-06 59.7 156 34.0
Sopen03g039910 Solanum pennellii HOM05D008208 ORTHO05D010143 1.1e-06 59.7 767 22.3
MD09G1201700 Malus domestica HOM05D008208 ORTHO05D010143 1.4e-06 59.3 160 34.4
Nitab4.5_0006022g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 1.4e-06 59.3 792 22.1
HPP92_024449 Vanilla planifolia HOM05D008208 ORTHO05D010143 1.4e-06 59.3 46 54.3
CDE02G2770 Ceratophyllum demersum HOM05D046919 ORTHO05D043903 1.8e-06 58.9 137 34.3
PGSC0003DMG400002607 Solanum tuberosum HOM05D008208 ORTHO05D010143 1.8e-06 58.9 734 24.5
ClCG07G013360 Citrullus lanatus HOM05D026900 ORTHO05D010143 2.4e-06 58.5 742 21.4
Nitab4.5_0004969g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 5.3e-06 57.4 796 22.9


User provided reference genes

Program Settings