Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold265G46056 Striga asiatica HOM05D001329 ORTHO05D004946 0.0e+00 1374.4 692 100.0
SGA_v2.0_scaffold45G16999 Striga asiatica HOM05D001329 ORTHO05D004946 7.1e-234 814.3 667 69.1
Migut.I00963 Erythranthe guttata HOM05D001329 ORTHO05D004946 1.2e-209 733.8 638 63.2
SalBow2G1072 Salvia bowleyana HOM05D001329 ORTHO05D004946 1.0e-192 677.6 638 61.0
unitig_88.g27600 Utricularia gibba HOM05D001329 ORTHO05D004946 4.4e-183 645.6 624 57.5
Nitab4.5_0004969g0080 Nicotiana tabacum HOM05D001329 ORTHO05D004946 3.6e-169 599.4 650 53.4
Peaxi162Scf00038g01146 Petunia axillaris HOM05D001329 ORTHO05D004946 6.8e-168 595.1 519 62.4
Nitab4.5_0005085g0040 Nicotiana tabacum HOM05D001329 ORTHO05D004946 1.1e-165 587.8 650 53.1
GSVIVG01016954001 Vitis vinifera HOM05D001329 ORTHO05D004946 3.2e-165 586.3 506 62.6
Eucgr.J02692 Eucalyptus grandis HOM05D001329 ORTHO05D004946 9.2e-165 584.7 564 58.2
Eucgr.J02926 Eucalyptus grandis HOM05D001329 ORTHO05D004946 1.2e-164 584.3 564 58.2
Manes.11G031600 Manihot esculenta HOM05D001329 ORTHO05D004946 2.7e-164 583.2 512 61.5
Sopen03g039950 Solanum pennellii HOM05D001329 ORTHO05D004946 3.5e-164 582.8 589 56.2
Thecc.06G102200 Theobroma cacao HOM05D001329 ORTHO05D004946 3.5e-164 582.8 604 55.0
Solyc03g121120.4 Solanum lycopersicum HOM05D001329 ORTHO05D004946 1.0e-163 581.3 589 56.0
PGSC0003DMG400002521 Solanum tuberosum HOM05D001329 ORTHO05D004946 1.0e-163 581.3 648 52.2
Cc04_g02430 Coffea canephora HOM05D001329 ORTHO05D004946 6.6e-163 578.6 616 54.7
Potri.001G191200 Populus trichocarpa HOM05D001329 ORTHO05D004946 8.6e-163 578.2 605 55.5
Ciclev10025165m.g Citrus clementina HOM05D001329 ORTHO05D004946 1.2e-161 574.3 561 57.8
TAR626G1508 Trochodendron aralioides HOM05D001329 ORTHO05D004946 1.2e-161 574.3 528 59.8
TAR626G1659 Trochodendron aralioides HOM05D001329 ORTHO05D004946 1.2e-161 574.3 528 59.8
CAN.G1143.24 Capsicum annuum HOM05D001329 ORTHO05D004946 2.1e-161 573.5 519 59.7
Lsat_1_v5_gn_4_98041 Lactuca sativa HOM05D001329 ORTHO05D004946 2.1e-161 573.5 566 57.6
HanXRQChr05g0139791 Helianthus annuus HOM05D001329 ORTHO05D004946 8.1e-161 571.6 556 57.6
PGR102G1644 Punica granatum HOM05D001329 ORTHO05D004946 3.1e-160 569.7 596 55.4
Duzib235G0146 Durio zibethinus HOM05D001329 ORTHO05D004946 2.6e-159 566.6 510 59.6
THA.LOC104803142 Tarenaya hassleriana HOM05D001329 ORTHO05D004946 3.4e-159 566.2 619 53.8
TWI18G0587 Tripterygium wilfordii HOM05D001329 ORTHO05D004946 1.7e-158 563.9 518 59.8
Aa31LG3G5830 Aethionema arabicum HOM05D001329 ORTHO05D004946 1.1e-157 561.2 573 54.5
COL.COLO4_30535 Corchorus olitorius HOM05D001329 ORTHO05D004946 1.1e-157 561.2 516 59.1
Gorai.011G070300 Gossypium raimondii HOM05D001329 ORTHO05D004946 1.4e-157 560.8 620 52.3
Nn8g39015 Nelumbo nucifera HOM05D001329 ORTHO05D004946 2.4e-157 560.1 540 57.0
Sc12g0010100 Simmondsia chinensis HOM05D001329 ORTHO05D004946 2.4e-157 560.1 648 51.4
QL05p019057 Quercus lobata HOM05D001329 ORTHO05D004946 1.6e-156 557.4 507 59.4
Carub.0008s1040 Capsella rubella HOM05D001329 ORTHO05D004946 1.7e-155 553.9 503 59.0
Aqoxy7G03959 Aquilegia oxysepala HOM05D001329 ORTHO05D004946 3.9e-155 552.7 524 58.4
CANSAT56G2668 Cannabis sativa HOM05D001329 ORTHO05D004946 1.5e-154 550.8 661 52.2
MD17G1180500 Malus domestica HOM05D001329 ORTHO05D004946 5.6e-154 548.9 504 59.7
AL8G24420 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 1.2e-153 547.7 499 58.9
ClCG07G013420 Citrullus lanatus HOM05D001329 ORTHO05D004946 1.6e-153 547.4 659 51.0
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 1.6e-153 547.4 503 58.6
EL10Ac9g21183 Beta vulgaris HOM05D001329 ORTHO05D004946 2.8e-153 546.6 571 55.0
Rhsim08G0228700 Rhododendron simsii HOM05D001329 ORTHO05D004946 2.8e-153 546.6 754 46.8
ClCG07G013460 Citrullus lanatus HOM05D001329 ORTHO05D004946 4.7e-153 545.8 659 50.8
Sed0006591 Sechium edule HOM05D001329 ORTHO05D004946 4.7e-153 545.8 594 53.7
AT5G50340 Arabidopsis thaliana HOM05D001329 ORTHO05D004946 1.1e-152 544.7 498 58.6
vmacro18841 Vaccinium macrocarpon HOM05D001329 ORTHO05D004946 1.8e-152 543.9 552 55.8
arahy.Tifrunner.gnm1.ann1.KL0FMA Arachis hypogaea HOM05D001329 ORTHO05D002618 4.0e-152 542.7 500 59.0
Sp6g12440 Schrenkiella parvula HOM05D001329 ORTHO05D004946 4.0e-152 542.7 499 57.1
arahy.Tifrunner.gnm1.ann1.B6KHKZ Arachis hypogaea HOM05D001329 ORTHO05D002618 6.8e-152 542.0 502 59.0
MBI02_g35318_MAGBIO Magnolia biondii HOM05D001329 ORTHO05D004946 4.4e-151 539.3 575 53.9
FvH4_6g32620 Fragaria vesca HOM05D001329 ORTHO05D004946 7.6e-151 538.5 594 53.5
Lalb_Chr04g0263001 Lupinus albus HOM05D001329 ORTHO05D004946 9.9e-151 538.1 503 56.9
Psat4g196800 Pisum sativum HOM05D001329 ORTHO05D004946 1.7e-150 537.3 530 56.4
BraA03t11990Z Brassica rapa HOM05D001329 ORTHO05D004946 2.2e-150 537.0 525 55.4
Medtr8g014670 Medicago truncatula HOM05D001329 ORTHO05D004946 2.2e-150 537.0 505 57.6
Thhalv10013055m.g Eutrema salsugineum HOM05D001329 ORTHO05D004946 4.9e-150 535.8 501 57.3
RcHm_v2.0_Chr2g0141101 Rosa chinensis HOM05D001329 ORTHO05D004946 6.4e-150 535.4 641 51.3
A03p27790 Brassica napus HOM05D001329 ORTHO05D004946 8.4e-150 535.0 552 54.0
Dinv30424 Davidia involucrata HOM05D001329 ORTHO05D004946 1.4e-149 534.3 517 59.2
Glyma.08G199700 Glycine max HOM05D001329 ORTHO05D004946 1.4e-149 534.3 512 57.6
Ah.01g017270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 3.2e-149 533.1 660 50.9
BcaC01g04813 Brassica carinata HOM05D001329 ORTHO05D004946 9.2e-149 531.6 575 52.0
VMungo0331G1514 Vigna mungo HOM05D001329 ORTHO05D004946 2.7e-148 530.0 502 57.8
BolC3t15673H Brassica oleracea HOM05D001329 ORTHO05D004946 6.0e-148 528.9 578 51.9
Phvul.010G143800 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 7.8e-148 528.5 513 56.9
CsaV3_3G023430 Cucumis sativus L. HOM05D001329 ORTHO05D004946 1.0e-147 528.1 506 58.1
C03p33520 Brassica napus HOM05D001329 ORTHO05D004946 1.3e-147 527.7 578 51.7
Gohir.A10G064700 Gossypium hirsutum HOM05D001329 ORTHO05D004946 5.1e-147 525.8 620 50.5
CiPaw.01G230000 Carya illinoinensis HOM05D001329 ORTHO05D004946 6.6e-147 525.4 502 58.2
PSO782G0993 Papaver somniferum HOM05D001329 ORTHO05D004946 8.6e-147 525.0 501 56.7
MELO3C013011.2 Cucumis melo HOM05D001329 ORTHO05D004946 1.2e-145 521.2 577 52.3
Lalb_Chr24g0396201 Lupinus albus HOM05D001329 ORTHO05D004946 3.6e-145 519.6 507 56.6
TPR.G15143 Trifolium pratense HOM05D001329 ORTHO05D004946 4.7e-145 519.2 537 54.4
Os06g0151600 Oryza sativa ssp. japonica HOM05D001329 ORTHO05D004946 8.1e-145 518.5 507 55.8
ATR0705G162 Amborella trichopoda HOM05D001329 ORTHO05D004946 6.9e-144 515.4 502 56.0
Hund07630 Selenicereus undatus HOM05D001329 ORTHO05D004946 4.4e-143 512.7 600 51.0
Ca_23279_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 5.8e-143 512.3 502 57.0
PSO478G0947 Papaver somniferum HOM05D001329 ORTHO05D004946 7.6e-143 511.9 501 56.1
AUR62031953 Chenopodium quinoa HOM05D001329 ORTHO05D004946 9.3e-141 505.0 565 52.4
BcaB01g02899 Brassica carinata HOM05D001329 ORTHO05D004946 2.7e-140 503.4 497 54.9
Prupe.3G056500 Prunus persica HOM05D001329 ORTHO05D004946 4.6e-140 502.7 637 49.1
arahy.Tifrunner.gnm1.ann1.V5Z0HR Arachis hypogaea HOM05D001329 ORTHO05D004946 8.7e-139 498.4 516 51.9
Sabra01G0150400 Salix brachista HOM05D001329 ORTHO05D004946 8.7e-139 498.4 672 47.8
TPR.G6578 Trifolium pratense HOM05D001329 ORTHO05D004946 1.8e-136 490.7 504 54.2
Phvul.005G165000 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 3.1e-136 490.0 502 53.6
Lj3g0004043 Lotus japonicus HOM05D001329 ORTHO05D004946 1.2e-135 488.0 502 53.0
VMungo1080G1498 Vigna mungo HOM05D001329 ORTHO05D004946 2.6e-135 486.9 504 52.8
FAN05G0851 Fragaria x ananassa HOM05D001329 ORTHO05D004946 7.6e-135 485.3 597 49.4
Glyma.15G021000 Glycine max HOM05D001329 ORTHO05D004946 8.4e-134 481.9 529 52.2
Medtr2g100640 Medicago truncatula HOM05D001329 ORTHO05D004946 1.6e-132 477.6 638 46.4
GSVIVG01016953001 Vitis vinifera HOM05D001329 ORTHO05D004946 2.3e-131 473.8 540 51.9
DCAR_007591 Daucus carota HOM05D001329 ORTHO05D004946 1.9e-130 470.7 598 47.8
Ca_01173_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 2.4e-128 463.8 499 51.9
Lj3g0020598 Lotus japonicus HOM05D001329 ORTHO05D004946 3.1e-128 463.4 405 62.7
Gohir.D10G066200 Gossypium hirsutum HOM05D001329 ORTHO05D004946 1.4e-120 438.0 404 59.4
Mapoly0008s0091 Marchantia polymorpha HOM05D001329 ORTHO05D004946 5.3e-120 436.0 534 46.8
Zm00001eb270700 Zea mays HOM05D001329 ORTHO05D004946 1.2e-119 434.9 388 59.0
Lj9C514G19 Lonicera japonica HOM05D001329 ORTHO05D004946 1.9e-117 427.6 447 57.3
AUR62022239 Chenopodium quinoa HOM05D001329 ORTHO05D004946 5.5e-117 426.0 488 49.4
FAN14G3013 Fragaria x ananassa HOM05D001329 ORTHO05D004946 7.4e-114 415.6 506 49.0
Pp3c1_36770 Physcomitrium patens HOM05D001329 ORTHO05D004946 9.6e-114 415.2 519 47.0
SEGI_18109 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 1.3e-110 404.8 387 56.8
Psat5g295200 Pisum sativum HOM05D001329 ORTHO05D004946 1.4e-109 401.4 454 52.4
VMungo1080G0220 Vigna mungo HOM05D001329 ORTHO05D004946 9.7e-106 388.7 372 55.4
Actinidia32112 Actinidia chinensis HOM05D001329 ORTHO05D004946 3.1e-104 383.6 324 63.6
SMO146G0024 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 5.5e-101 372.9 494 43.5
AagrBONN_evm.TU.Sc2ySwM_340.358 Anthoceros agrestis HOM05D001329 ORTHO05D004946 1.7e-97 361.3 353 54.4
CBR_g52747 Chara braunii HOM05D001329 ORTHO05D004946 3.1e-96 357.1 615 39.5
AUR62022260 Chenopodium quinoa HOM05D001329 ORTHO05D004946 6.9e-96 355.9 298 62.8
Atru.chr1.3485 Acer truncatum HOM05D001329 ORTHO05D004946 2.0e-95 354.4 318 61.6
CDE02G2442 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 5.9e-87 326.2 273 62.6
CSS0007570 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 1.5e-85 321.6 403 49.4
MCO02G474 Micromonas commoda HOM05D001329 ORTHO05D004946 4.7e-84 316.6 481 41.0
arahy.Tifrunner.gnm1.ann1.VU8J7C Arachis hypogaea HOM05D001329 ORTHO05D004946 1.5e-82 311.6 507 37.9
PRCOL_00001245 Prasinoderma coloniale HOM05D001329 ORTHO05D004946 1.3e-78 298.5 538 37.4
Cpa.g.sc25.37 Carica papaya HOM05D001329 ORTHO05D004946 2.7e-76 290.8 199 76.9
CARHR258160 Cardamine hirsuta HOM05D001329 ORTHO05D004946 4.0e-75 287.0 241 61.4
CSS0047870 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 3.7e-73 280.4 384 46.1
CSS0049032 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 6.5e-70 269.6 292 53.8
Ah.16g103270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 3.6e-68 263.8 283 52.7
Psat5g239480 Pisum sativum HOM05D001329 ORTHO05D004946 8.8e-67 259.2 337 50.1
Haze_15870 Corylus avellana HOM05D001329 ORTHO05D004946 2.0e-66 258.1 297 51.9
Haze_15874 Corylus avellana HOM05D001329 ORTHO05D004946 2.0e-66 258.1 297 51.9
SHI11143 Sapria himalayana HOM05D000023 ORTHO05D000014 2.5e-61 241.1 300 46.3
HPP92_003950 Vanilla planifolia HOM05D001329 ORTHO05D004946 1.8e-56 224.9 266 49.2
RcHm_v2.0_Chr2g0141091 Rosa chinensis HOM05D001329 ORTHO05D004946 2.0e-55 221.5 240 55.8
Actinidia21724 Actinidia chinensis HOM05D001329 ORTHO05D004946 6.6e-54 216.5 353 41.4
Cre07.g317908 Chlamydomonas reinhardtii HOM05D001329 ORTHO05D004946 1.1e-48 199.1 638 26.8
CANSAT56G4024 Cannabis sativa HOM05D001329 ORTHO05D004946 1.7e-46 191.8 198 54.5
Lsat_1_v5_gn_1_63401 Lactuca sativa HOM05D001329 ORTHO05D004946 2.8e-44 184.5 145 70.3
AL58U10020 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 4.0e-43 180.6 200 51.0
CDE02G0018 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 5.2e-43 180.3 200 50.5
Haze_15873 Corylus avellana HOM05D001329 ORTHO05D004946 4.4e-42 177.2 162 61.7
CANSAT56G3773 Cannabis sativa HOM05D001329 ORTHO05D004946 6.4e-41 173.3 183 54.6
Oeu063750.1 Olea europaea HOM05D001329 ORTHO05D004946 6.4e-41 173.3 112 78.6
Lsat_1_v5_gn_9_94461 Lactuca sativa HOM05D001329 ORTHO05D004946 5.4e-40 170.2 129 69.0
SMO173G0086 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.6e-36 158.7 251 39.8
SMO173G0075 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 3.6e-36 157.5 254 39.0
SMO173G0029 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.4e-35 155.6 251 39.4
Haze_15869 Corylus avellana HOM05D001329 ORTHO05D004946 4.6e-31 140.6 155 55.5
SEGI_08653 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 7.3e-29 133.3 170 44.1
Psat5g295400 Pisum sativum HOM05D001329 ORTHO05D004946 2.0e-26 125.2 128 50.0
Hma1.2p1_0430F.1_g151230 Hydrangea macrophylla HOM05D001329 ORTHO05D004946 6.0e-23 113.6 250 34.4
SMO146G0193 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 2.3e-22 111.7 266 32.3
Glyma.13G353300 Glycine max HOM05D001329 ORTHO05D004946 1.1e-21 109.4 107 52.3
PSO675G5297 Papaver somniferum HOM05D001329 ORTHO05D004946 2.4e-19 101.7 132 42.4
SMO173G0090 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 3.1e-19 101.3 224 32.6
Gohir.A05G129875 Gossypium hirsutum HOM05D001329 ORTHO05D004946 4.5e-18 97.4 78 65.4
Cpa.g.sc25.35 Carica papaya HOM05D001329 ORTHO05D004946 3.8e-17 94.4 102 45.1
arahy.Tifrunner.gnm1.ann1.3W2ZUL Arachis hypogaea HOM05D001329 ORTHO05D010271 5.1e-14 84.0 74 55.4
SHI11147 Sapria himalayana HOM05D000105 ORTHO05D000023 2.5e-13 81.6 72 55.6
Eucgr.G00548 Eucalyptus grandis HOM05D001329 ORTHO05D004946 1.4e-11 75.9 45 82.2
SHI11148 Sapria himalayana HOM05D000105 ORTHO05D000023 9.0e-11 73.2 75 50.7
SMO173G0061 Selaginella moellendorffii HOM05D001549 ORTHO05D003098 2.0e-10 72.0 52 71.2
Cfa015409 Carpinus fangiana HOM05D007753 ORTHO05D009385 1.9e-08 65.5 58 55.2
SalBow8G0867 Salvia bowleyana HOM05D001329 ORTHO05D004946 3.2e-08 64.7 78 50.0
C04p54240 Brassica napus HOM05D001329 ORTHO05D004946 5.5e-08 63.9 84 39.3
SMO173G0016 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 5.5e-08 63.9 108 37.0
BcaB01g06145 Brassica carinata HOM05D001329 ORTHO05D004946 7.1e-08 63.5 47 51.1
BcaC02g08434 Brassica carinata HOM05D001329 ORTHO05D004946 7.1e-08 63.5 47 51.1
Glyma.08G248800 Glycine max HOM05D001329 ORTHO05D004946 1.2e-07 62.8 59 57.6
arahy.Tifrunner.gnm1.ann1.R9IHKK Arachis hypogaea HOM05D001329 ORTHO05D010271 2.7e-07 61.6 52 55.8
arahy.Tifrunner.gnm1.ann1.H8VH8W Arachis hypogaea HOM05D008137 ORTHO05D010271 1.8e-06 58.9 51 51.0


User provided reference genes

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