Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold263G46023 Striga asiatica HOM05D000029 ORTHO05D000854 1.4e-75 286.2 139 100.0
Actinidia37938 Actinidia chinensis HOM05D000029 ORTHO05D000854 6.6e-14 81.3 85 45.9
Dinv39533 Davidia involucrata HOM05D000029 ORTHO05D000854 1.5e-13 80.1 83 47.0
HanXRQChr12g0366831 Helianthus annuus HOM05D000029 ORTHO05D000854 3.3e-13 79.0 85 44.7
MELO3C003743.2 Cucumis melo HOM05D000029 ORTHO05D000854 7.3e-13 77.8 84 42.9
Dinv31865 Davidia involucrata HOM05D000029 ORTHO05D000854 9.6e-13 77.4 83 45.8
COL.COLO4_26126 Corchorus olitorius HOM05D000029 ORTHO05D000854 1.4e-11 73.6 113 37.2
PGR031G0445 Punica granatum HOM05D000029 ORTHO05D000854 1.4e-11 73.6 85 43.5
CsaV3_3G045960 Cucumis sativus L. HOM05D000029 ORTHO05D000854 2.4e-11 72.8 83 41.0
Cfa013972 Carpinus fangiana HOM05D000029 ORTHO05D000854 3.1e-11 72.4 84 44.0
CiPaw.07G147700 Carya illinoinensis HOM05D000029 ORTHO05D008832 3.1e-11 72.4 84 42.9
THA.LOC104811419 Tarenaya hassleriana HOM05D000029 ORTHO05D000854 3.1e-11 72.4 71 49.3
Lj4C21T5 Lonicera japonica HOM05D000029 ORTHO05D000854 4.0e-11 72.0 83 41.0
THA.LOC104813786 Tarenaya hassleriana HOM05D000029 ORTHO05D000854 5.3e-11 71.6 85 42.4
CSS0049239 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D000854 6.9e-11 71.2 82 43.9
Hma1.2p1_0733F.1_g210220 Hydrangea macrophylla HOM05D000029 ORTHO05D000854 6.9e-11 71.2 74 45.9
arahy.Tifrunner.gnm1.ann1.97EMNK Arachis hypogaea HOM05D000029 ORTHO05D000854 9.0e-11 70.9 84 44.0
ClCG05G018180 Citrullus lanatus HOM05D000029 ORTHO05D000854 1.5e-10 70.1 84 39.3
Gohir.A05G185500 Gossypium hirsutum HOM05D000029 ORTHO05D000854 1.5e-10 70.1 84 40.5
arahy.Tifrunner.gnm1.ann1.8BA7G9 Arachis hypogaea HOM05D000029 ORTHO05D000854 2.0e-10 69.7 84 42.9
CSS0031229 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D000854 2.6e-10 69.3 83 41.0
Gohir.D05G188300 Gossypium hirsutum HOM05D000029 ORTHO05D000854 2.6e-10 69.3 84 39.3
Gorai.009G193600 Gossypium raimondii HOM05D000029 ORTHO05D000854 2.6e-10 69.3 84 39.3
Duzib041G0705 Durio zibethinus HOM05D000029 ORTHO05D000854 9.9e-10 67.4 84 40.5
DCAR_014030 Daucus carota HOM05D000029 ORTHO05D008832 2.2e-09 66.2 83 41.0
SGA_v2.0_scaffold92G28209 Striga asiatica HOM05D000029 ORTHO05D000854 2.2e-09 66.2 44 68.2
AL2G35810 Arabidopsis lyrata HOM05D000029 ORTHO05D000854 2.9e-09 65.9 83 42.2
Manes.05G145600 Manihot esculenta HOM05D000029 ORTHO05D000854 2.9e-09 65.9 90 38.9
Carub.0002s2267 Capsella rubella HOM05D000029 ORTHO05D000854 3.8e-09 65.5 77 44.2
Actinidia00278 Actinidia chinensis HOM05D000029 ORTHO05D000854 8.4e-09 64.3 82 37.8
Thhalv10018069m.g Eutrema salsugineum HOM05D000029 ORTHO05D000854 8.4e-09 64.3 83 41.0
AT1G75820 Arabidopsis thaliana HOM05D000029 ORTHO05D000854 1.1e-08 63.9 71 45.1
TWI56G1368 Tripterygium wilfordii HOM05D000029 ORTHO05D000854 1.1e-08 63.9 84 39.3
CARHR069240 Cardamine hirsuta HOM05D000029 ORTHO05D000854 1.4e-08 63.5 71 42.3
Aa31LG4G6020 Aethionema arabicum HOM05D000029 ORTHO05D000854 1.9e-08 63.2 71 45.1
A07p41350 Brassica napus HOM05D000029 ORTHO05D000854 1.9e-08 63.2 137 34.3
BraA07t31668Z Brassica rapa HOM05D000029 ORTHO05D000854 1.9e-08 63.2 137 34.3
Sp5g30940 Schrenkiella parvula HOM05D000029 ORTHO05D000854 2.4e-08 62.8 71 43.7
BcaC08g47324 Brassica carinata HOM05D000029 ORTHO05D000854 3.2e-08 62.4 132 34.8
C06p49770 Brassica napus HOM05D000029 ORTHO05D000854 3.2e-08 62.4 132 34.8
BolC6t40016H Brassica oleracea HOM05D000029 ORTHO05D000854 3.2e-08 62.4 132 34.8
Gorai.009G269700 Gossypium raimondii HOM05D000029 ORTHO05D000854 7.1e-08 61.2 84 35.7
vmacro04366 Vaccinium macrocarpon HOM05D000029 ORTHO05D000854 1.6e-07 60.1 84 35.7
Lsat_1_v5_gn_8_30160 Lactuca sativa HOM05D000029 ORTHO05D000854 2.7e-07 59.3 51 54.9
Lsat_1_v5_gn_8_30001 Lactuca sativa HOM05D000029 ORTHO05D000854 4.6e-07 58.5 51 52.9
Solyc04g081590.4 Solanum lycopersicum HOM05D000029 ORTHO05D000854 4.6e-07 58.5 55 54.5
Sopen04g035200 Solanum pennellii HOM05D000029 ORTHO05D000854 4.6e-07 58.5 55 54.5
CSS0021294 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D000854 6.0e-07 58.2 82 36.6
Peaxi162Scf00553g00620 Petunia axillaris HOM05D000029 ORTHO05D000854 2.3e-06 56.2 86 37.2
Oeu061974.1 Olea europaea HOM05D000029 ORTHO05D000854 3.9e-06 55.5 50 52.0
ECA238G3421 Erigeron canadensis HOM05D000029 ORTHO05D000854 5.1e-06 55.1 54 48.1
PGSC0003DMG400009941 Solanum tuberosum HOM05D000029 ORTHO05D000854 8.7e-06 54.3 55 49.1


User provided reference genes

Program Settings