Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold263G46022 Striga asiatica HOM05D009140 ORTHO05D010636 8.3e-84 313.5 146 100.0
SGA_v2.0_scaffold254G45257 Striga asiatica HOM05D005881 ORTHO05D007298 9.1e-14 80.9 78 50.0
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 7.2e-11 71.2 81 43.2
SGA_v2.0_scaffold53G19333 Striga asiatica HOM05D009140 ORTHO05D010636 7.2e-11 71.2 73 42.5
SGA_v2.0_scaffold57G20155 Striga asiatica HOM05D009140 ORTHO05D010636 2.7e-10 69.3 78 41.0
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 3.6e-10 68.9 74 41.9
SGA_v2.0_scaffold134G34731 Striga asiatica HOM05D009140 ORTHO05D000004 1.0e-09 67.4 73 41.1
SGA_v2.0_scaffold12G06017 Striga asiatica HOM05D009140 ORTHO05D010636 4.0e-09 65.5 78 37.2
SGA_v2.0_scaffold163G37969 Striga asiatica HOM05D000003 ORTHO05D000004 5.2e-09 65.1 69 44.9
SGA_v2.0_scaffold11G05675 Striga asiatica HOM05D023122 ORTHO05D010636 6.7e-09 64.7 86 38.4
SGA_v2.0_scaffold43G16397 Striga asiatica HOM05D009140 ORTHO05D010215 6.7e-09 64.7 79 43.0
SGA_v2.0_scaffold6G03466 Striga asiatica HOM05D000003 ORTHO05D000004 6.7e-09 64.7 78 37.2
SGA_v2.0_scaffold214G42292 Striga asiatica HOM05D011272 ORTHO05D010636 3.3e-08 62.4 76 44.7
SGA_v2.0_scaffold36G14413 Striga asiatica HOM05D000003 ORTHO05D011213 3.3e-08 62.4 82 39.0
SGA_v2.0_scaffold208G41982 Striga asiatica HOM05D009140 ORTHO05D010636 4.4e-08 62.0 64 43.8
SGA_v2.0_scaffold22G09699 Striga asiatica HOM05D000003 ORTHO05D000004 5.7e-08 61.6 74 40.5
SGA_v2.0_scaffold61G21225 Striga asiatica HOM05D000003 ORTHO05D000006 9.7e-08 60.8 50 52.0
SGA_v2.0_scaffold76G25079 Striga asiatica HOM05D009140 ORTHO05D000004 1.7e-07 60.1 62 45.2
CANSAT35G1450 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-07 59.3 69 37.7
SGA_v2.0_scaffold67G22642 Striga asiatica HOM05D000407 ORTHO05D000004 6.3e-07 58.2 76 35.5
SGA_v2.0_scaffold26G11238 Striga asiatica HOM05D008147 ORTHO05D010215 8.2e-07 57.8 78 34.6
SGA_v2.0_scaffold15G07258 Striga asiatica HOM05D009140 ORTHO05D010636 1.1e-06 57.4 54 46.3
SGA_v2.0_scaffold53G19415 Striga asiatica HOM05D009140 ORTHO05D010215 1.1e-06 57.4 65 40.0
BcaB05g25247 Brassica carinata HOM05D000003 ORTHO05D000411 1.4e-06 57.0 66 40.9
SGA_v2.0_scaffold159G37708 Striga asiatica HOM05D000364 ORTHO05D000235 1.4e-06 57.0 67 41.8
SGA_v2.0_scaffold16G07766 Striga asiatica HOM05D009140 ORTHO05D010636 1.4e-06 57.0 67 41.8
CANSAT25G0762 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-06 56.2 78 39.7
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 2.4e-06 56.2 78 35.9
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 2.4e-06 56.2 91 37.4
SGA_v2.0_scaffold231G43406 Striga asiatica HOM05D000024 ORTHO05D000006 3.1e-06 55.8 67 44.8
SGA_v2.0_scaffold37G14870 Striga asiatica HOM05D011272 ORTHO05D010636 3.1e-06 55.8 66 39.4
BcaB01g02064 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-06 55.5 77 37.7
PSO170G5348 Papaver somniferum HOM05D000003 ORTHO05D000004 4.1e-06 55.5 70 37.1
SGA_v2.0_scaffold64G21958 Striga asiatica HOM05D020088 ORTHO05D010636 4.1e-06 55.5 68 36.8
CANSAT01G0458 Cannabis sativa HOM05D000003 ORTHO05D000167 9.1e-06 54.3 74 35.1
CANSAT80G0899 Cannabis sativa HOM05D000003 ORTHO05D000004 9.1e-06 54.3 59 49.2


User provided reference genes

Program Settings