Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold217G42455 Striga asiatica HOM05D011630 ORTHO05D014269 1.2e-71 273.1 139 100.0
SGA_v2.0_scaffold263G45986 Striga asiatica HOM05D011630 ORTHO05D014269 1.2e-71 273.1 139 100.0
SGA_v2.0_scaffold2G00884 Striga asiatica HOM05D011630 ORTHO05D014269 2.5e-69 265.4 139 97.1
SGA_v2.0_scaffold53G19282 Striga asiatica HOM05D011630 ORTHO05D014269 2.5e-69 265.4 139 97.1
SGA_v2.0_scaffold354G49733 Striga asiatica HOM05D011630 ORTHO05D014269 5.5e-69 264.2 139 96.4
SGA_v2.0_scaffold203G41556 Striga asiatica HOM05D011630 ORTHO05D014269 7.5e-66 253.8 139 92.8
SGA_v2.0_scaffold22G09678 Striga asiatica HOM05D011630 ORTHO05D014269 1.1e-64 250.0 126 99.2
SGA_v2.0_scaffold30G12367 Striga asiatica HOM05D011630 ORTHO05D014269 4.1e-64 248.1 139 91.4
SGA_v2.0_scaffold621G53225 Striga asiatica HOM05D011630 ORTHO05D014269 1.6e-60 236.1 125 95.2
SGA_v2.0_scaffold366G50026 Striga asiatica HOM05D011630 ORTHO05D014269 2.0e-50 202.6 110 90.0
SGA_v2.0_scaffold30G12563 Striga asiatica HOM05D011630 ORTHO05D002863 6.6e-22 107.8 69 82.6
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 1.0e-14 84.0 98 48.0
SGA_v2.0_scaffold211G42175 Striga asiatica HOM05D011630 ORTHO05D014269 7.3e-13 77.8 63 54.0
SGA_v2.0_scaffold199G41207 Striga asiatica HOM05D011630 ORTHO05D014269 9.6e-13 77.4 66 54.5
SGA_v2.0_scaffold3G01575 Striga asiatica HOM05D011630 ORTHO05D014269 3.4e-10 68.9 103 39.8
SGA_v2.0_scaffold150G36678 Striga asiatica HOM05D011630 ORTHO05D014269 9.9e-10 67.4 66 48.5
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 2.9e-09 65.9 119 33.6
CAN.G1459.18 Capsicum annuum HOM05D009408 ORTHO05D000309 2.4e-08 62.8 60 51.7
SGA_v2.0_scaffold12G06209 Striga asiatica HOM05D000403 ORTHO05D000350 3.2e-08 62.4 52 57.7
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 4.2e-08 62.0 45 53.3
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 7.1e-08 61.2 60 45.0
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-07 60.5 60 45.0
SGA_v2.0_scaffold8G04646 Striga asiatica HOM05D000134 ORTHO05D000168 1.2e-07 60.5 48 60.4
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-07 60.1 60 45.0
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-07 60.1 60 45.0
PGSC0003DMG400008721 Solanum tuberosum HOM05D009408 ORTHO05D000309 1.6e-07 60.1 136 36.0
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 3.5e-07 58.9 59 45.8
Solyc10g055427.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 3.5e-07 58.9 139 34.5
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 4.6e-07 58.5 60 45.0
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 4.6e-07 58.5 54 46.3
Solyc09g072730.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 4.6e-07 58.5 139 34.5
Solyc10g080784.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 6.0e-07 58.2 104 37.5
CAN.G1014.58 Capsicum annuum HOM05D009408 ORTHO05D000309 7.9e-07 57.8 59 49.2
Lj2P1128T27 Lonicera japonica HOM05D008126 ORTHO05D000309 7.9e-07 57.8 60 43.3
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 7.9e-07 57.8 81 38.3
SGA_v2.0_scaffold100G29657 Striga asiatica HOM05D001383 ORTHO05D000309 7.9e-07 57.8 54 46.3
AL8G10620 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.0e-06 57.4 158 32.9
SGA_v2.0_scaffold670G53420 Striga asiatica HOM05D001383 ORTHO05D000309 1.0e-06 57.4 54 46.3
CAN.G1801.2 Capsicum annuum HOM05D009408 ORTHO05D000309 1.3e-06 57.0 48 54.2
COL.COLO4_10433 Corchorus olitorius HOM05D023691 ORTHO05D000309 1.3e-06 57.0 47 46.8
PGSC0003DMG400029733 Solanum tuberosum HOM05D009408 ORTHO05D000309 1.3e-06 57.0 136 35.3
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-06 56.6 81 37.0
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-06 56.6 83 39.8
Solyc12g062733.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 1.7e-06 56.6 136 34.6
PGSC0003DMG400014126 Solanum tuberosum HOM05D009408 ORTHO05D000309 1.7e-06 56.6 105 38.1
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 1.7e-06 56.6 44 56.8
Solyc03g096303.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 2.3e-06 56.2 111 30.6
SGA_v2.0_scaffold364G49972 Striga asiatica HOM05D001383 ORTHO05D000309 2.3e-06 56.2 41 51.2
SGA_v2.0_scaffold45G16985 Striga asiatica HOM05D001383 ORTHO05D000309 2.3e-06 56.2 41 51.2
AUR62024396 Chenopodium quinoa HOM05D005931 ORTHO05D005553 3.0e-06 55.8 90 33.3
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 3.0e-06 55.8 141 31.2
Lj2P759T3 Lonicera japonica HOM05D008126 ORTHO05D000309 3.0e-06 55.8 60 43.3
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 55.8 45 48.9
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 55.8 45 51.1
PGSC0003DMG400041825 Solanum tuberosum HOM05D009408 ORTHO05D000309 3.0e-06 55.8 136 35.3
CAN.G1343.17 Capsicum annuum HOM05D009408 ORTHO05D000309 3.9e-06 55.5 87 37.9
Lj2P720T1 Lonicera japonica HOM05D008126 ORTHO05D000309 3.9e-06 55.5 61 45.9
VMungo0540G1207 Vigna mungo HOM05D008573 ORTHO05D009911 3.9e-06 55.5 98 36.7
AL1G58110 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 5.1e-06 55.1 159 32.7
AL3G46750 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 5.1e-06 55.1 162 31.5
Carub.0008s0717 Capsella rubella HOM05D010286 ORTHO05D000309 5.1e-06 55.1 132 34.1
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 5.1e-06 55.1 91 35.2
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 5.1e-06 55.1 41 53.7
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 5.1e-06 55.1 41 53.7
SGA_v2.0_scaffold267G46184 Striga asiatica HOM05D035478 ORTHO05D000309 5.1e-06 55.1 90 33.3
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 6.6e-06 54.7 98 37.8
CAN.G548.7 Capsicum annuum HOM05D009408 ORTHO05D000309 6.6e-06 54.7 79 38.0
AUR62015041 Chenopodium quinoa HOM05D005931 ORTHO05D005553 6.6e-06 54.7 105 28.6
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 6.6e-06 54.7 41 51.2
Lj1A225T5 Lonicera japonica HOM05D008126 ORTHO05D000309 6.6e-06 54.7 75 38.7
SGA_v2.0_scaffold80G25824 Striga asiatica HOM05D001383 ORTHO05D000309 6.6e-06 54.7 93 35.5
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 6.6e-06 54.7 48 47.9
AL5G19890 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 8.7e-06 54.3 158 31.6
AL5G20070 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 8.7e-06 54.3 158 31.6
CAN.G11.43 Capsicum annuum HOM05D009408 ORTHO05D000309 8.7e-06 54.3 47 53.2
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 8.7e-06 54.3 43 55.8
Lj3P715T47 Lonicera japonica HOM05D008126 ORTHO05D000309 8.7e-06 54.3 131 32.1
SGA_v2.0_scaffold55G19817 Striga asiatica HOM05D001383 ORTHO05D000309 8.7e-06 54.3 45 46.7


User provided reference genes

Program Settings