Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2629G54166 Striga asiatica HOM05D002638 ORTHO05D002821 1.6e-62 242.7 126 100.0
SGA_v2.0_scaffold97G29258 Striga asiatica HOM05D002638 ORTHO05D002821 1.6e-35 152.9 78 100.0
Migut.F00626 Erythranthe guttata HOM05D002638 ORTHO05D002821 2.9e-32 142.1 127 59.1
SalBow3G2464 Salvia bowleyana HOM05D002638 ORTHO05D002821 4.7e-27 124.8 115 57.4
MSTRG.8358 Avicennia marina HOM05D002638 ORTHO05D002821 2.4e-26 122.5 127 55.9
Oeu043158.1 Olea europaea HOM05D002638 ORTHO05D002821 1.2e-25 120.2 126 48.4
Peaxi162Scf00284g00223 Petunia axillaris HOM05D002638 ORTHO05D002821 3.2e-23 112.1 134 50.0
Solyc06g050590.3 Solanum lycopersicum HOM05D002638 ORTHO05D002821 1.7e-21 106.3 131 51.1
Nitab4.5_0001106g0140 Nicotiana tabacum HOM05D002638 ORTHO05D002821 3.0e-21 105.5 130 47.7
PGSC0003DMG400023955 Solanum tuberosum HOM05D002638 ORTHO05D002821 3.0e-21 105.5 131 50.4
Sopen06g016130 Solanum pennellii HOM05D002638 ORTHO05D002821 3.9e-21 105.1 131 51.1
CAN.G17.3 Capsicum annuum HOM05D002638 ORTHO05D002821 1.3e-19 100.1 131 47.3
Dinv21797 Davidia involucrata HOM05D002638 ORTHO05D002821 3.6e-19 98.6 130 44.6
Peaxi162Scf00304g00222 Petunia axillaris HOM05D002638 ORTHO05D002821 3.6e-19 98.6 130 44.6
CSS0017510 Camellia sinensis var. sinensis HOM05D002638 ORTHO05D002821 1.1e-18 97.1 130 43.8
Duzib114G0210 Durio zibethinus HOM05D002638 ORTHO05D002821 1.8e-18 96.3 132 44.7
TAR633G1453 Trochodendron aralioides HOM05D002638 ORTHO05D002821 1.5e-17 93.2 131 46.6
CANSAT56G4382 Cannabis sativa HOM05D002638 ORTHO05D002821 4.4e-17 91.7 134 50.7
Thecc.10G008900 Theobroma cacao HOM05D002638 ORTHO05D002821 5.8e-17 91.3 132 43.2
MD01G1159900 Malus domestica HOM05D002638 ORTHO05D002821 2.2e-16 89.4 131 44.3
Actinidia00976 Actinidia chinensis HOM05D002638 ORTHO05D002821 2.9e-16 89.0 131 42.0
Gorai.010G193700 Gossypium raimondii HOM05D002638 ORTHO05D002821 2.9e-16 89.0 131 40.5
Gohir.A13G014000 Gossypium hirsutum HOM05D002638 ORTHO05D002821 3.8e-16 88.6 129 41.9
Prupe.2G257900 Prunus persica HOM05D002638 ORTHO05D002821 4.9e-16 88.2 132 43.9
TWI09G0298 Tripterygium wilfordii HOM05D002638 ORTHO05D002821 4.9e-16 88.2 131 41.2
Gorai.013G016600 Gossypium raimondii HOM05D002638 ORTHO05D002821 6.4e-16 87.8 131 42.7
Actinidia29733 Actinidia chinensis HOM05D002638 ORTHO05D002821 8.4e-16 87.4 127 44.1
CiPaw.01G302500 Carya illinoinensis HOM05D002638 ORTHO05D002821 8.4e-16 87.4 132 44.7
Nitab4.5_0002854g0030 Nicotiana tabacum HOM05D002638 ORTHO05D002821 8.4e-16 87.4 119 44.5
CSS0039843 Camellia sinensis var. sinensis HOM05D002638 ORTHO05D002821 1.9e-15 86.3 128 45.3
MD07G1228300 Malus domestica HOM05D002638 ORTHO05D002821 2.4e-15 85.9 131 42.7
Cc02_g05910 Coffea canephora HOM05D002638 ORTHO05D002821 5.4e-15 84.7 130 43.1
Gohir.D13G015200 Gossypium hirsutum HOM05D002638 ORTHO05D002821 5.4e-15 84.7 129 41.9
Gohir.D06G166101 Gossypium hirsutum HOM05D002638 ORTHO05D002821 7.1e-15 84.3 131 38.9
Actinidia00654 Actinidia chinensis HOM05D002638 ORTHO05D002821 9.3e-15 84.0 130 40.0
Aqoxy2G00772 Aquilegia oxysepala HOM05D002638 ORTHO05D002821 9.3e-15 84.0 128 45.3
Gohir.A13G013900 Gossypium hirsutum HOM05D002638 ORTHO05D002821 9.3e-15 84.0 129 41.1
Gohir.A06G160150 Gossypium hirsutum HOM05D002638 ORTHO05D002821 1.2e-14 83.6 131 38.9
Atru.chr12.118 Acer truncatum HOM05D002638 ORTHO05D002821 1.6e-14 83.2 127 41.7
GSVIVG01032737001 Vitis vinifera HOM05D002638 ORTHO05D002821 2.7e-14 82.4 131 41.2
Haze_17293 Corylus avellana HOM05D002655 ORTHO05D002558 3.5e-14 82.0 122 41.8
RcHm_v2.0_Chr1g0371301 Rosa chinensis HOM05D002638 ORTHO05D002821 3.5e-14 82.0 132 39.4
Lalb_Chr08g0231391 Lupinus albus HOM05D002638 ORTHO05D002821 1.7e-13 79.7 130 38.5
Lsat_1_v5_gn_9_60641 Lactuca sativa HOM05D002638 ORTHO05D002821 3.9e-13 78.6 131 41.2
vmacro06939 Vaccinium macrocarpon HOM05D002638 ORTHO05D002821 3.9e-13 78.6 131 42.7
Cfa001258 Carpinus fangiana HOM05D002655 ORTHO05D002558 5.1e-13 78.2 119 42.9
TWI73G0136 Tripterygium wilfordii HOM05D002638 ORTHO05D002821 6.6e-13 77.8 131 39.7
Glyma.18G023300 Glycine max HOM05D002638 ORTHO05D002821 8.7e-13 77.4 130 39.2
Glyma.11G233700 Glycine max HOM05D002638 ORTHO05D002821 1.1e-12 77.0 130 36.9
PSO384G0763 Papaver somniferum HOM05D002638 ORTHO05D002821 1.1e-12 77.0 131 39.7
Rhsim03G0148000 Rhododendron simsii HOM05D002638 ORTHO05D002821 1.1e-12 77.0 128 39.8
Oeu051647.1 Olea europaea HOM05D002638 ORTHO05D002821 3.3e-12 75.5 95 47.4
Medtr3g071960 Medicago truncatula HOM05D002638 ORTHO05D002821 4.3e-12 75.1 126 38.1
Sc10g0002760 Simmondsia chinensis HOM05D002638 ORTHO05D002821 4.3e-12 75.1 126 36.5
FAN10G3508 Fragaria x ananassa HOM05D002638 ORTHO05D002821 5.6e-12 74.7 132 37.1
Duzib106G0950 Durio zibethinus HOM05D002638 ORTHO05D002821 9.6e-12 73.9 130 37.7
Psat5g126160 Pisum sativum HOM05D002638 ORTHO05D002821 9.6e-12 73.9 129 38.8
ClCG11G005970 Citrullus lanatus HOM05D002638 ORTHO05D002821 1.3e-11 73.6 126 42.1
Sed0010113 Sechium edule HOM05D002638 ORTHO05D002821 1.3e-11 73.6 133 43.6
TAR636G2135 Trochodendron aralioides HOM05D002638 ORTHO05D002821 1.6e-11 73.2 131 39.7
Dinv10574 Davidia involucrata HOM05D002638 ORTHO05D002821 2.1e-11 72.8 116 42.2
COL.COLO4_25808 Corchorus olitorius HOM05D002655 ORTHO05D002558 3.6e-11 72.0 127 38.6
PGR044G0146 Punica granatum HOM05D002638 ORTHO05D002821 3.6e-11 72.0 130 38.5
Ca_20871_v3 Cicer arietinum L. HOM05D002638 ORTHO05D002821 4.8e-11 71.6 120 33.3
QL08p063999 Quercus lobata HOM05D002638 ORTHO05D002821 4.8e-11 71.6 141 39.0
ECA232G1414 Erigeron canadensis HOM05D002638 ORTHO05D002821 6.2e-11 71.2 113 43.4
Nn3g16557 Nelumbo nucifera HOM05D002638 ORTHO05D002821 1.1e-10 70.5 127 37.0
MELO3C008321.2 Cucumis melo HOM05D002638 ORTHO05D002821 1.4e-10 70.1 126 39.7
PSO339G1968 Papaver somniferum HOM05D002638 ORTHO05D002821 1.4e-10 70.1 131 38.9
Sabra10G0140500 Salix brachista HOM05D002638 ORTHO05D002821 1.4e-10 70.1 79 45.6
Lj6g0006950 Lotus japonicus HOM05D002638 ORTHO05D002821 1.8e-10 69.7 131 38.2
Phvul.001G247000 Phaseolus vulgaris HOM05D002638 ORTHO05D002821 1.8e-10 69.7 131 35.9
arahy.Tifrunner.gnm1.ann1.JA22RM Arachis hypogaea HOM05D002638 ORTHO05D002821 3.1e-10 68.9 116 37.1
Hma1.2p1_0292F.1_g115620 Hydrangea macrophylla HOM05D002638 ORTHO05D002821 3.1e-10 68.9 132 38.6
CiPaw.02G196600 Carya illinoinensis HOM05D002638 ORTHO05D002821 4.0e-10 68.6 130 37.7
Potri.008G074100 Populus trichocarpa HOM05D002638 ORTHO05D002821 6.9e-10 67.8 75 50.7
arahy.Tifrunner.gnm1.ann1.AGI60H Arachis hypogaea HOM05D002638 ORTHO05D002821 1.2e-09 67.0 125 34.4
Ca_15167_v3 Cicer arietinum L. HOM05D002638 ORTHO05D002821 1.5e-09 66.6 129 36.4
Sabra08G0055200 Salix brachista HOM05D000490 ORTHO05D001398 2.0e-09 66.2 75 49.3
Potri.010G183200 Populus trichocarpa HOM05D002638 ORTHO05D002821 2.6e-09 65.9 75 46.7
Rhsim09G0181500 Rhododendron simsii HOM05D002638 ORTHO05D002821 2.6e-09 65.9 114 39.5
Gohir.D13G015100 Gossypium hirsutum HOM05D002638 ORTHO05D002821 4.5e-09 65.1 79 45.6
CsaV3_6G002040 Cucumis sativus L. HOM05D002638 ORTHO05D002821 7.6e-09 64.3 126 38.1
Cpa.g.sc19.114 Carica papaya HOM05D002638 ORTHO05D002821 2.2e-08 62.8 77 46.8
vmacro09993 Vaccinium macrocarpon HOM05D002638 ORTHO05D002821 2.2e-08 62.8 122 33.6
FAN06G3888 Fragaria x ananassa HOM05D002655 ORTHO05D002558 2.9e-08 62.4 120 35.0
FAN03G1220 Fragaria x ananassa HOM05D002655 ORTHO05D002558 3.8e-08 62.0 120 35.0
Manes.10G007300 Manihot esculenta HOM05D002638 ORTHO05D002821 3.8e-08 62.0 86 41.9
EL10Ac2g04911 Beta vulgaris HOM05D002638 ORTHO05D002821 4.9e-08 61.6 118 37.3
DCAR_000426 Daucus carota HOM05D002638 ORTHO05D002821 1.1e-07 60.5 65 52.3
AUR62012319 Chenopodium quinoa HOM05D002638 ORTHO05D002821 1.9e-07 59.7 118 38.1
Eucgr.J00164 Eucalyptus grandis HOM05D002638 ORTHO05D002821 2.4e-07 59.3 129 36.4
HanXRQChr14g0458781 Helianthus annuus HOM05D002638 ORTHO05D002821 3.2e-07 58.9 113 34.5
Medtr5g083520 Medicago truncatula HOM05D002638 ORTHO05D002821 7.1e-07 57.8 130 35.4
Hund15871 Selenicereus undatus HOM05D002638 ORTHO05D002821 7.1e-07 57.8 138 33.3
TPR.G30430 Trifolium pratense HOM05D002638 ORTHO05D002821 7.1e-07 57.8 131 32.8
THA.LOC104810130 Tarenaya hassleriana HOM05D002638 ORTHO05D002821 1.6e-06 56.6 132 34.8
Nitab4.5_0000074g0270 Nicotiana tabacum HOM05D002638 ORTHO05D002821 2.1e-06 56.2 105 35.2
Actinidia33895 Actinidia chinensis HOM05D002638 ORTHO05D002821 2.7e-06 55.8 43 62.8
Lalb_Chr22g0359761 Lupinus albus HOM05D002638 ORTHO05D002821 3.5e-06 55.5 103 40.8
Psat2g029880 Pisum sativum HOM05D002638 ORTHO05D002821 3.5e-06 55.5 130 33.8
Hund13525 Selenicereus undatus HOM05D002638 ORTHO05D002821 3.5e-06 55.5 126 34.9
Manes.07G135900 Manihot esculenta HOM05D002638 ORTHO05D002821 6.0e-06 54.7 71 49.3
Lalb_Chr10g0105351 Lupinus albus HOM05D002638 ORTHO05D002821 7.9e-06 54.3 103 40.8


User provided reference genes

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