Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold261G45921 Striga asiatica HOM05D014377 ORTHO05D000006 2.7e-214 748.4 382 100.0
SGA_v2.0_scaffold82G26187 Striga asiatica HOM05D000003 ORTHO05D000006 1.3e-40 171.4 93 89.2
SGA_v2.0_scaffold177G39404 Striga asiatica HOM05D014377 ORTHO05D000006 5.1e-40 169.5 94 88.3
SGA_v2.0_scaffold141G35567 Striga asiatica HOM05D014377 ORTHO05D000006 2.8e-38 163.7 89 91.0
SGA_v2.0_scaffold3605G54368 Striga asiatica HOM05D014377 ORTHO05D000006 1.8e-37 161.0 89 88.8
SGA_v2.0_scaffold132G34510 Striga asiatica HOM05D014377 ORTHO05D000006 1.4e-34 151.4 83 88.0
SGA_v2.0_scaffold55G19857 Striga asiatica HOM05D014377 ORTHO05D000006 2.4e-34 150.6 89 83.1
SGA_v2.0_scaffold38G15068 Striga asiatica HOM05D000003 ORTHO05D000006 1.3e-30 138.3 89 76.4
SGA_v2.0_scaffold328G48786 Striga asiatica HOM05D014377 ORTHO05D000006 8.1e-30 135.6 73 91.8
SGA_v2.0_scaffold72G24142 Striga asiatica HOM05D014377 ORTHO05D000006 1.0e-24 118.6 72 79.2
SGA_v2.0_scaffold328G48789 Striga asiatica HOM05D000024 ORTHO05D000006 7.2e-18 95.9 61 82.0
PSO386G0019 Papaver somniferum HOM05D000003 ORTHO05D000006 3.2e-10 70.5 86 46.5
SHI53523 Sapria himalayana HOM05D000003 ORTHO05D000004 9.4e-10 68.9 68 48.5
SHI54645 Sapria himalayana HOM05D000003 ORTHO05D000004 9.4e-10 68.9 68 48.5
PGSC0003DMG400012502 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.1e-09 67.8 84 41.7
PGSC0003DMG400023605 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.1e-09 67.8 84 41.7
FvH4_4g13062 Fragaria vesca HOM05D000003 ORTHO05D011454 4.6e-09 66.6 99 35.4
Psat4g054960 Pisum sativum HOM05D000003 ORTHO05D000006 4.6e-09 66.6 75 38.7
SHI41315 Sapria himalayana HOM05D000024 ORTHO05D000006 7.9e-09 65.9 83 42.2
SHI33976 Sapria himalayana HOM05D000024 ORTHO05D000006 1.4e-08 65.1 83 38.6
MBI03_g34697_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 2.3e-08 64.3 71 43.7
MBI01_g02761_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 3.0e-08 63.9 77 42.9
MBI01_g27614_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.0e-08 63.9 71 40.8
MBI07_g42485_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 3.0e-08 63.9 71 40.8
Sabra06G0000400 Salix brachista HOM05D000003 ORTHO05D000004 3.0e-08 63.9 83 36.1
MBI05_g04117_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.1e-08 63.2 69 43.5
SHI46154 Sapria himalayana HOM05D000024 ORTHO05D000006 5.1e-08 63.2 83 38.6
SHI55178 Sapria himalayana HOM05D000024 ORTHO05D000006 5.1e-08 63.2 83 39.8
Aa31sc85G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.7e-08 62.8 110 31.8
MBI09_g04378_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.7e-08 62.8 82 42.7
SHI45782 Sapria himalayana HOM05D000024 ORTHO05D000006 6.7e-08 62.8 55 50.9
Atru.chr6.307 Acer truncatum HOM05D000003 ORTHO05D000004 8.8e-08 62.4 87 31.0
MBI10_g04437_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 8.8e-08 62.4 83 39.8
PSO017G6159 Papaver somniferum HOM05D000003 ORTHO05D000006 8.8e-08 62.4 114 32.5
SHI34887 Sapria himalayana HOM05D000024 ORTHO05D000006 8.8e-08 62.4 57 49.1
SHI37465 Sapria himalayana HOM05D000003 ORTHO05D000006 8.8e-08 62.4 80 40.0
MBI18_g19074_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.5e-07 61.6 102 39.2
SHI49586 Sapria himalayana HOM05D000024 ORTHO05D000006 1.5e-07 61.6 55 49.1
MBI16_g04481_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 2.0e-07 61.2 70 41.4
MBI17_g31746_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.0e-07 61.2 71 33.8
Psat0s1308g0040 Pisum sativum HOM05D002636 ORTHO05D004459 2.5e-07 60.8 71 39.4
SHI04747 Sapria himalayana HOM05D000024 ORTHO05D000006 2.5e-07 60.8 51 52.9
SHI30824 Sapria himalayana HOM05D000003 ORTHO05D000004 2.5e-07 60.8 83 36.1
SHI54405 Sapria himalayana HOM05D000024 ORTHO05D000006 2.5e-07 60.8 55 49.1
MBI11_g15903_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 3.3e-07 60.5 75 40.0
PSO017G6420 Papaver somniferum HOM05D000003 ORTHO05D000004 3.3e-07 60.5 117 30.8
Rhsim01G0109500 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.3e-07 60.5 126 31.0
SHI34191 Sapria himalayana HOM05D000024 ORTHO05D000006 3.3e-07 60.5 55 49.1
SHI54474 Sapria himalayana HOM05D000024 ORTHO05D000006 3.3e-07 60.5 48 54.2
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 3.3e-07 60.5 82 30.5
Atru.chr6.1051 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-07 60.1 70 34.3
Oeu036834.1 Olea europaea HOM05D000024 ORTHO05D010916 4.3e-07 60.1 82 37.8
SHI28637 Sapria himalayana HOM05D000003 ORTHO05D000004 4.3e-07 60.1 57 47.4
SHI43710 Sapria himalayana HOM05D000024 ORTHO05D000006 4.3e-07 60.1 86 36.0
SHI07131 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-07 59.7 79 36.7
PSO339G5045 Papaver somniferum HOM05D000003 ORTHO05D000006 7.4e-07 59.3 119 31.1
QL12p002401 Quercus lobata HOM05D000003 ORTHO05D000006 7.4e-07 59.3 87 39.1
SHI30822 Sapria himalayana HOM05D000003 ORTHO05D000004 7.4e-07 59.3 83 41.0
MBI16_g12294_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 9.7e-07 58.9 71 42.3
SHI29344 Sapria himalayana HOM05D000024 ORTHO05D000006 9.7e-07 58.9 55 47.3
SHI37184 Sapria himalayana HOM05D000024 ORTHO05D000006 9.7e-07 58.9 55 45.5
SHI45408 Sapria himalayana HOM05D000024 ORTHO05D000006 9.7e-07 58.9 55 45.5
SHI49069 Sapria himalayana HOM05D000024 ORTHO05D000006 9.7e-07 58.9 55 47.3
PGSC0003DMG400009747 Solanum tuberosum HOM05D000003 ORTHO05D000006 9.7e-07 58.9 80 35.0
PGSC0003DMG400035720 Solanum tuberosum HOM05D026012 ORTHO05D000006 9.7e-07 58.9 81 38.3
Atru.chr1.2519 Acer truncatum HOM05D000003 ORTHO05D002259 1.3e-06 58.5 91 30.8
Actinidia24025 Actinidia chinensis HOM05D000003 ORTHO05D000004 1.3e-06 58.5 71 35.2
Aa31LG7G10780 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-06 58.5 85 32.9
SHI30807 Sapria himalayana HOM05D000003 ORTHO05D000004 1.3e-06 58.5 55 47.3
SHI43412 Sapria himalayana HOM05D000024 ORTHO05D000006 1.3e-06 58.5 61 45.9
SHI47828 Sapria himalayana HOM05D000024 ORTHO05D000006 1.3e-06 58.5 43 58.1
SHI48005 Sapria himalayana HOM05D000024 ORTHO05D000006 1.3e-06 58.5 45 55.6
SHI54802 Sapria himalayana HOM05D000024 ORTHO05D000006 1.3e-06 58.5 83 37.3
SHI54862 Sapria himalayana HOM05D000024 ORTHO05D000006 1.3e-06 58.5 76 36.8
SHI55193 Sapria himalayana HOM05D000024 ORTHO05D000006 1.3e-06 58.5 55 45.5
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 1.3e-06 58.5 83 31.3
MBI02_g32911_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.7e-06 58.2 79 34.2
MBI05_g03468_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.7e-06 58.2 79 40.5
MBI18_g23808_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.7e-06 58.2 69 43.5
SHI08790 Sapria himalayana HOM05D000024 ORTHO05D000006 1.7e-06 58.2 57 45.6
SHI20839 Sapria himalayana HOM05D000003 ORTHO05D000004 1.7e-06 58.2 55 47.3
SHI21498 Sapria himalayana HOM05D000024 ORTHO05D000006 1.7e-06 58.2 55 45.5
SHI35428 Sapria himalayana HOM05D000024 ORTHO05D000006 1.7e-06 58.2 60 45.0
SHI48246 Sapria himalayana HOM05D000024 ORTHO05D000006 1.7e-06 58.2 55 45.5
SHI54624 Sapria himalayana HOM05D000024 ORTHO05D000006 1.7e-06 58.2 55 47.3
SHI55191 Sapria himalayana HOM05D000024 ORTHO05D000006 1.7e-06 58.2 55 45.5
Atru.chr3.3701 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 57.8 76 35.5
Aa31LG10G7630 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-06 57.8 88 33.0
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-06 57.8 79 38.0
MBI16_g08498_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.2e-06 57.8 86 37.2
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 2.2e-06 57.8 73 38.4
SHI30884 Sapria himalayana HOM05D000024 ORTHO05D000006 2.2e-06 57.8 49 53.1
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 2.2e-06 57.8 91 29.7
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 2.2e-06 57.8 91 29.7
SHI55139 Sapria himalayana HOM05D000003 ORTHO05D000004 2.2e-06 57.8 55 47.3
Atru.chr1.2603 Acer truncatum HOM05D000003 ORTHO05D000004 2.8e-06 57.4 130 26.9
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.8e-06 57.4 66 33.3
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.8e-06 57.4 65 36.9
Nitab4.5_0000049g0230 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.8e-06 57.4 83 33.7
SHI09342 Sapria himalayana HOM05D000003 ORTHO05D000004 2.8e-06 57.4 91 29.7
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 2.8e-06 57.4 91 29.7
SHI30661 Sapria himalayana HOM05D000024 ORTHO05D000006 2.8e-06 57.4 55 45.5
SHI30886 Sapria himalayana HOM05D000024 ORTHO05D000006 2.8e-06 57.4 75 33.3
SHI37487 Sapria himalayana HOM05D000024 ORTHO05D000006 2.8e-06 57.4 51 47.1
SHI37670 Sapria himalayana HOM05D000024 ORTHO05D000006 2.8e-06 57.4 43 55.8
SHI54521 Sapria himalayana HOM05D000024 ORTHO05D000006 2.8e-06 57.4 55 45.5
SHI54616 Sapria himalayana HOM05D000024 ORTHO05D000006 2.8e-06 57.4 55 45.5
SHI55059 Sapria himalayana HOM05D000024 ORTHO05D000006 2.8e-06 57.4 55 45.5
Atru.chr2.1228 Acer truncatum HOM05D000003 ORTHO05D000006 3.7e-06 57.0 82 28.0
Aa31sc734G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.7e-06 57.0 80 33.8
CSS0005817 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.7e-06 57.0 65 36.9
CiPaw.06G025000 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.7e-06 57.0 75 34.7
MBI17_g23187_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 3.7e-06 57.0 78 32.1
Oeu043929.1 Olea europaea HOM05D000003 ORTHO05D000006 3.7e-06 57.0 81 34.6
SHI03670 Sapria himalayana HOM05D000024 ORTHO05D000006 3.7e-06 57.0 77 36.4
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 3.7e-06 57.0 91 29.7
SHI25935 Sapria himalayana HOM05D000024 ORTHO05D000007 3.7e-06 57.0 43 55.8
SHI34393 Sapria himalayana HOM05D000024 ORTHO05D000006 3.7e-06 57.0 39 59.0
SHI37121 Sapria himalayana HOM05D000024 ORTHO05D000006 3.7e-06 57.0 39 59.0
SHI37619 Sapria himalayana HOM05D000024 ORTHO05D000006 3.7e-06 57.0 39 59.0
SHI38090 Sapria himalayana HOM05D000024 ORTHO05D000006 3.7e-06 57.0 39 59.0
SHI47765 Sapria himalayana HOM05D000003 ORTHO05D000004 3.7e-06 57.0 44 52.3
Aa31LG11G11010 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.8e-06 56.6 76 34.2
Aa31LG3G6650 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.8e-06 56.6 79 34.2
Aa31sc85G90 Aethionema arabicum HOM05D000003 ORTHO05D000006 4.8e-06 56.6 68 38.2
SHI00717 Sapria himalayana HOM05D000024 ORTHO05D000006 4.8e-06 56.6 53 45.3
SHI31988 Sapria himalayana HOM05D000024 ORTHO05D000006 4.8e-06 56.6 75 34.7
SHI34096 Sapria himalayana HOM05D000003 ORTHO05D000004 4.8e-06 56.6 91 29.7
SHI34189 Sapria himalayana HOM05D000024 ORTHO05D000006 4.8e-06 56.6 55 45.5
SHI39331 Sapria himalayana HOM05D000024 ORTHO05D000006 4.8e-06 56.6 51 47.1
SHI51511 Sapria himalayana HOM05D000024 ORTHO05D000006 4.8e-06 56.6 39 59.0
SHI55174 Sapria himalayana HOM05D000024 ORTHO05D000006 4.8e-06 56.6 66 37.9
Aa31LG10G9400 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.3e-06 56.2 78 32.1
Aa31sc256G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.3e-06 56.2 78 35.9
MBI03_g17137_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 6.3e-06 56.2 69 40.6
MBI18_g26031_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.3e-06 56.2 73 42.5
SHI30688 Sapria himalayana HOM05D000024 ORTHO05D000006 6.3e-06 56.2 68 38.2
SHI33744 Sapria himalayana HOM05D000003 ORTHO05D000004 6.3e-06 56.2 55 41.8
SHI43597 Sapria himalayana HOM05D000024 ORTHO05D000006 6.3e-06 56.2 77 35.1
SHI54458 Sapria himalayana HOM05D000024 ORTHO05D000006 6.3e-06 56.2 55 43.6
SHI54733 Sapria himalayana HOM05D000024 ORTHO05D000006 6.3e-06 56.2 55 43.6
SHI54855 Sapria himalayana HOM05D000024 ORTHO05D000006 6.3e-06 56.2 55 43.6
SHI54997 Sapria himalayana HOM05D000024 ORTHO05D000006 6.3e-06 56.2 83 36.1
THA.LOC104807977 Tarenaya hassleriana HOM05D000003 ORTHO05D000006 6.3e-06 56.2 101 33.7
Thecc.09G159900 Theobroma cacao HOM05D000024 ORTHO05D000006 6.3e-06 56.2 55 45.5
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 8.2e-06 55.8 110 32.7
Atru.chr2.915 Acer truncatum HOM05D000003 ORTHO05D000004 8.2e-06 55.8 87 31.0
MBI09_g13294_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 8.2e-06 55.8 70 34.3
MBI15_g18587_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 8.2e-06 55.8 83 30.1
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 8.2e-06 55.8 68 38.2
RcHm_v2.0_Chr5g0026401 Rosa chinensis HOM05D000003 ORTHO05D000006 8.2e-06 55.8 68 38.2
SHI17577 Sapria himalayana HOM05D000024 ORTHO05D000006 8.2e-06 55.8 39 56.4
SHI24128 Sapria himalayana HOM05D000024 ORTHO05D000006 8.2e-06 55.8 78 34.6
SHI37189 Sapria himalayana HOM05D000003 ORTHO05D000004 8.2e-06 55.8 78 37.2
SHI37947 Sapria himalayana HOM05D000024 ORTHO05D000006 8.2e-06 55.8 75 34.7
SHI39530 Sapria himalayana HOM05D000024 ORTHO05D000006 8.2e-06 55.8 68 38.2
SHI46014 Sapria himalayana HOM05D000003 ORTHO05D000004 8.2e-06 55.8 68 38.2
SHI47673 Sapria himalayana HOM05D000024 ORTHO05D000006 8.2e-06 55.8 37 62.2
SHI49046 Sapria himalayana HOM05D000024 ORTHO05D000006 8.2e-06 55.8 68 38.2
SHI50093 Sapria himalayana HOM05D000024 ORTHO05D000006 8.2e-06 55.8 55 43.6
SGA_v2.0_scaffold165G38191 Striga asiatica HOM05D000989 ORTHO05D001287 8.2e-06 55.8 34 64.7


User provided reference genes

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