Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold260G45870 Striga asiatica HOM05D000096 ORTHO05D000045 8.6e-140 500.4 260 100.0
SGA_v2.0_scaffold75G24967 Striga asiatica HOM05D018457 ORTHO05D000045 1.3e-92 343.6 291 63.6
SGA_v2.0_scaffold30G12441 Striga asiatica HOM05D000096 ORTHO05D000045 2.6e-80 302.8 282 61.3
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 1.1e-33 147.9 117 60.7
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-32 144.1 175 44.6
SGA_v2.0_scaffold33G13378 Striga asiatica HOM05D000096 ORTHO05D000045 1.6e-32 144.1 118 58.5
SGA_v2.0_scaffold87G27150 Striga asiatica HOM05D018457 ORTHO05D000045 7.2e-30 135.2 190 49.5
Cc02_g03810 Coffea canephora HOM05D000096 ORTHO05D000045 2.1e-29 133.7 129 56.6
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.8e-29 133.3 120 55.8
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.6e-29 132.9 120 55.8
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.6e-29 132.9 120 56.7
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-29 132.5 107 57.9
Cc00_g07260 Coffea canephora HOM05D000096 ORTHO05D000045 6.1e-29 132.1 121 55.4
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.8e-28 128.6 120 54.2
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-27 127.9 159 46.5
Cc02_g03220 Coffea canephora HOM05D000096 ORTHO05D000045 9.8e-27 124.8 129 52.7
Hma1.2p1_0115F.1_g055970 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 2.8e-26 123.2 120 51.7
CANSAT64G1628 Cannabis sativa HOM05D000096 ORTHO05D000045 3.7e-26 122.9 131 51.1
Atru.chr4.2124 Acer truncatum HOM05D000096 ORTHO05D000045 4.1e-25 119.4 139 47.5
Atru.chr3.2970 Acer truncatum HOM05D000096 ORTHO05D000045 5.4e-25 119.0 130 49.2
CiPaw.15G028600 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.4e-25 119.0 133 48.1
SGA_v2.0_scaffold27G11560 Striga asiatica HOM05D000096 ORTHO05D000045 5.4e-25 119.0 117 53.0
SGA_v2.0_scaffold1G00565 Striga asiatica HOM05D018457 ORTHO05D000045 7.0e-25 118.6 175 42.3
ECA055G0001 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-24 117.9 103 57.3
Oeu017259.1 Olea europaea HOM05D000096 ORTHO05D000045 1.2e-24 117.9 133 48.9
CiPaw.06G111300 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.6e-24 117.5 120 50.0
PGSC0003DMG400006247 Solanum tuberosum HOM05D011468 ORTHO05D012657 1.6e-24 117.5 122 46.7
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.0e-24 117.1 128 47.7
EL10Ac2g03227 Beta vulgaris HOM05D000096 ORTHO05D000045 2.9e-23 113.2 115 50.4
CiPaw.10G120300 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.9e-23 113.2 122 45.9
Oeu024349.1 Olea europaea HOM05D000096 ORTHO05D000045 5.0e-23 112.5 130 45.4
Oeu063187.1 Olea europaea HOM05D000096 ORTHO05D000045 1.5e-22 110.9 144 43.8
CiPaw.02G003800 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.5e-22 110.2 145 41.4
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 3.3e-22 109.8 120 48.3
Oeu054130.1 Olea europaea HOM05D000096 ORTHO05D000045 3.3e-22 109.8 131 45.0
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.3e-22 109.4 153 40.5
CAN.G205.1 Capsicum annuum HOM05D000096 ORTHO05D000045 7.3e-22 108.6 134 44.0
SGA_v2.0_scaffold46G17401 Striga asiatica HOM05D000096 ORTHO05D000045 7.3e-22 108.6 99 54.5
CiPaw.09G109800 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.5e-22 108.2 109 50.5
CiPaw.14G013400 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.5e-22 108.2 122 45.1
Oeu043599.1 Olea europaea HOM05D000096 ORTHO05D000045 9.5e-22 108.2 156 40.4
CiPaw.15G180000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.6e-21 107.5 120 45.0
Oeu034682.1 Olea europaea HOM05D000096 ORTHO05D000045 2.8e-21 106.7 158 42.4
CiPaw.09G168700 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.6e-21 106.3 145 40.0
EL10Ac7g17652 Beta vulgaris HOM05D000096 ORTHO05D000045 4.7e-21 105.9 110 49.1
CiPaw.13G069100 Carya illinoinensis HOM05D000096 ORTHO05D000045 8.0e-21 105.1 114 46.5
Oeu007626.1 Olea europaea HOM05D000096 ORTHO05D000045 8.0e-21 105.1 129 45.0
CANSAT78G0229 Cannabis sativa HOM05D000096 ORTHO05D000045 1.0e-20 104.8 114 48.2
CiPaw.01G296900 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.0e-20 104.8 122 42.6
CANSAT80G1195 Cannabis sativa HOM05D000096 ORTHO05D000045 5.2e-20 102.4 114 47.4
Oeu049649.1 Olea europaea HOM05D000096 ORTHO05D000045 5.2e-20 102.4 158 40.5
SGA_v2.0_scaffold511G52630 Striga asiatica HOM05D000096 ORTHO05D000045 1.2e-19 101.3 94 54.3
Cc03_g09110 Coffea canephora HOM05D000096 ORTHO05D000045 1.5e-19 100.9 128 38.3
CANSAT25G0821 Cannabis sativa HOM05D000096 ORTHO05D000045 2.0e-19 100.5 101 53.5
CiPaw.11G156500 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.0e-19 100.5 118 44.9
Oeu014096.1 Olea europaea HOM05D000096 ORTHO05D000045 2.6e-19 100.1 147 40.8
CiPaw.09G160200 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.4e-19 99.8 106 45.3
CiPaw.01G058000 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.4e-19 99.4 110 45.5
Oeu014098.1 Olea europaea HOM05D000096 ORTHO05D000045 4.4e-19 99.4 147 40.1
Oeu032961.1 Olea europaea HOM05D000096 ORTHO05D000045 5.8e-19 99.0 162 41.4
CiPaw.10G120400 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.8e-19 98.2 110 46.4
CANSAT25G0106 Cannabis sativa HOM05D000096 ORTHO05D000045 1.7e-18 97.4 102 52.0
Cc00_g08330 Coffea canephora HOM05D000096 ORTHO05D000045 1.7e-18 97.4 80 58.8
PGSC0003DMG400016517 Solanum tuberosum HOM05D018632 ORTHO05D018880 6.4e-18 95.5 97 47.4
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 1.1e-17 94.7 116 44.8
Oeu041800.1 Olea europaea HOM05D000096 ORTHO05D000045 1.8e-17 94.0 196 32.7
Oeu003460.1 Olea europaea HOM05D000096 ORTHO05D000045 5.4e-17 92.4 115 40.9
Oeu038389.1 Olea europaea HOM05D000096 ORTHO05D000045 7.0e-17 92.0 115 40.9
Oeu062429.1 Olea europaea HOM05D000096 ORTHO05D000045 7.0e-17 92.0 85 52.9
Atru.chr12.1652 Acer truncatum HOM05D000096 ORTHO05D000045 1.2e-16 91.3 90 53.3
AUR62027939 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.6e-16 90.9 135 41.5
CANSAT56G4396 Cannabis sativa HOM05D000096 ORTHO05D000045 2.0e-16 90.5 86 54.7
CiPaw.01G182600 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.0e-16 90.5 128 40.6
Oeu005870.1 Olea europaea HOM05D000096 ORTHO05D000045 2.0e-16 90.5 85 52.9
Oeu025879.1 Olea europaea HOM05D000096 ORTHO05D000045 1.0e-15 88.2 95 49.5
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 1.7e-15 87.4 120 40.0
Oeu029175.1 Olea europaea HOM05D000096 ORTHO05D000045 1.7e-15 87.4 89 48.3
ECA246G2596 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.3e-15 87.0 115 38.3
Oeu060826.1 Olea europaea HOM05D000096 ORTHO05D000045 2.3e-15 87.0 87 49.4
Oeu059201.1 Olea europaea HOM05D000096 ORTHO05D000045 3.0e-15 86.7 119 37.8
Cc01_g04040 Coffea canephora HOM05D000096 ORTHO05D000045 5.0e-15 85.9 143 37.8
Oeu057913.1 Olea europaea HOM05D000096 ORTHO05D000045 5.0e-15 85.9 123 39.0
Rhsim02G0156100 Rhododendron simsii HOM05D000096 ORTHO05D000045 6.6e-15 85.5 154 33.1
Zm00001eb137660 Zea mays HOM05D008064 ORTHO05D000045 6.6e-15 85.5 127 38.6
Zm00001eb245660 Zea mays HOM05D002425 ORTHO05D002709 6.6e-15 85.5 127 38.6
Zm00001eb337580 Zea mays HOM05D008064 ORTHO05D000045 6.6e-15 85.5 127 38.6
Zm00001eb399410 Zea mays HOM05D008064 ORTHO05D000045 6.6e-15 85.5 127 38.6
Oeu031952.1 Olea europaea HOM05D000096 ORTHO05D000045 1.1e-14 84.7 115 39.1
Zm00001eb381320 Zea mays HOM05D008064 ORTHO05D000045 1.1e-14 84.7 127 38.6
EL10Ac8g19574 Beta vulgaris HOM05D000096 ORTHO05D000045 1.5e-14 84.3 133 38.3
EL10Ac8g20587 Beta vulgaris HOM05D000096 ORTHO05D000045 1.5e-14 84.3 133 38.3
CAN.G273.19 Capsicum annuum HOM05D000096 ORTHO05D000045 1.5e-14 84.3 65 61.5
CiPaw.08G169300 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.5e-14 84.3 125 39.2
Oeu039129.1 Olea europaea HOM05D000096 ORTHO05D000045 1.5e-14 84.3 85 48.2
SGA_v2.0_scaffold142G35702 Striga asiatica HOM05D000096 ORTHO05D000045 1.5e-14 84.3 65 60.0
Aqoxy6G02750 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 1.9e-14 84.0 113 39.8
EL10Ac1g02149 Beta vulgaris HOM05D000096 ORTHO05D000045 1.9e-14 84.0 160 35.6
EL10Ac4g09359 Beta vulgaris HOM05D000096 ORTHO05D000045 1.9e-14 84.0 122 41.0
Zm00001eb138170 Zea mays HOM05D008064 ORTHO05D000045 1.9e-14 84.0 127 38.6
Zm00001eb175090 Zea mays HOM05D008064 ORTHO05D000045 1.9e-14 84.0 127 37.8
ECA240G0844 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.5e-14 83.6 122 37.7
EL10Ac5g10500 Beta vulgaris HOM05D000096 ORTHO05D000045 3.3e-14 83.2 129 38.8
RcHm_v2.0_Chr5g0013161 Rosa chinensis HOM05D000096 ORTHO05D000045 3.3e-14 83.2 117 39.3
EL10Ac6g13732 Beta vulgaris HOM05D000096 ORTHO05D000045 5.6e-14 82.4 133 37.6
ECA233G5367 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.6e-14 82.4 170 29.4
SGA_v2.0_scaffold73G24447 Striga asiatica HOM05D001218 ORTHO05D004088 5.6e-14 82.4 117 38.5
EL10Ac7g18199 Beta vulgaris HOM05D000096 ORTHO05D000045 7.3e-14 82.0 129 38.8
EL10Ac1g01110 Beta vulgaris HOM05D000096 ORTHO05D000045 9.5e-14 81.6 129 38.8
Oeu017741.1 Olea europaea HOM05D000096 ORTHO05D000045 9.5e-14 81.6 159 34.6
CiPaw.08G106200 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.2e-13 81.3 122 39.3
Zm00001eb340930 Zea mays HOM05D008064 ORTHO05D000045 1.2e-13 81.3 127 37.0
EL10As14g24092 Beta vulgaris HOM05D007854 ORTHO05D010168 1.6e-13 80.9 122 40.2
FvH4_3g36631 Fragaria vesca HOM05D000096 ORTHO05D000045 1.6e-13 80.9 128 37.5
Zm00001eb185320 Zea mays HOM05D008270 ORTHO05D010684 1.6e-13 80.9 127 37.8
EL10Ac4g07888 Beta vulgaris HOM05D003315 ORTHO05D003407 2.1e-13 80.5 168 35.1
EL10Ac8g20308 Beta vulgaris HOM05D000096 ORTHO05D000045 2.1e-13 80.5 120 39.2
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 2.1e-13 80.5 124 36.3
EL10Ac7g17443 Beta vulgaris HOM05D007854 ORTHO05D000045 2.8e-13 80.1 129 38.0
CAN.G97.48 Capsicum annuum HOM05D000096 ORTHO05D000045 2.8e-13 80.1 65 58.5
EL10Ac5g12706 Beta vulgaris HOM05D000096 ORTHO05D000045 3.6e-13 79.7 129 38.0
Medtr0003s0430 Medicago truncatula HOM05D000096 ORTHO05D020878 3.6e-13 79.7 121 34.7
Medtr0077s0060 Medicago truncatula HOM05D000096 ORTHO05D000045 3.6e-13 79.7 113 36.3
Oeu006695.1 Olea europaea HOM05D000096 ORTHO05D000045 3.6e-13 79.7 121 38.0
Zm00001eb385560 Zea mays HOM05D008064 ORTHO05D000045 3.6e-13 79.7 121 38.8
EL10Ac5g11733 Beta vulgaris HOM05D000096 ORTHO05D000045 4.7e-13 79.3 129 38.0
AUR62031758 Chenopodium quinoa HOM05D000096 ORTHO05D000045 4.7e-13 79.3 110 40.0
QL04p091343 Quercus lobata HOM05D000096 ORTHO05D000045 6.2e-13 79.0 117 37.6
Nn4g25156 Nelumbo nucifera HOM05D000096 ORTHO05D000045 8.0e-13 78.6 132 36.4
EL10Ac7g16756 Beta vulgaris HOM05D000096 ORTHO05D000045 1.4e-12 77.8 129 37.2
CAN.G265.7 Capsicum annuum HOM05D000096 ORTHO05D000045 1.4e-12 77.8 139 36.7
ECA233G0447 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.4e-12 77.8 115 37.4
Zm00001eb265920 Zea mays HOM05D000096 ORTHO05D000045 1.4e-12 77.8 127 36.2
Oeu032904.1 Olea europaea HOM05D000096 ORTHO05D000045 1.8e-12 77.4 94 40.4
Oeu061219.1 Olea europaea HOM05D000096 ORTHO05D000045 1.8e-12 77.4 91 42.9
TPR.G18330 Trifolium pratense HOM05D000096 ORTHO05D000045 1.8e-12 77.4 119 36.1
AUR62004426 Chenopodium quinoa HOM05D000096 ORTHO05D000045 2.3e-12 77.0 127 35.4
Oeu029244.1 Olea europaea HOM05D000096 ORTHO05D000045 3.1e-12 76.6 93 40.9
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 3.1e-12 76.6 121 36.4
Oeu053513.1 Olea europaea HOM05D000096 ORTHO05D000045 4.0e-12 76.3 94 40.4
Oeu007778.1 Olea europaea HOM05D000096 ORTHO05D000045 8.9e-12 75.1 93 39.8
PSO478G3149 Papaver somniferum HOM05D000096 ORTHO05D000045 8.9e-12 75.1 134 32.8
Oeu033280.1 Olea europaea HOM05D000096 ORTHO05D000045 1.5e-11 74.3 74 48.6
Oeu046628.1 Olea europaea HOM05D000096 ORTHO05D000045 1.5e-11 74.3 82 43.9
ECA246G4273 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.0e-11 73.9 86 40.7
Oeu049717.1 Olea europaea HOM05D000096 ORTHO05D000045 2.0e-11 73.9 93 40.9
Atru.chr2.1644 Acer truncatum HOM05D000096 ORTHO05D000045 2.6e-11 73.6 73 47.9
CiPaw.09G189900 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.6e-11 73.6 145 33.8
CAN.G297.5 Capsicum annuum HOM05D000096 ORTHO05D000045 5.8e-11 72.4 62 56.5
Oeu007468.1 Olea europaea HOM05D000096 ORTHO05D000045 5.8e-11 72.4 75 45.3
PSO357G0164 Papaver somniferum HOM05D000096 ORTHO05D000045 5.8e-11 72.4 116 35.3
Oeu023668.1 Olea europaea HOM05D000096 ORTHO05D000045 7.5e-11 72.0 124 36.3
COL.COLO4_30364 Corchorus olitorius HOM05D000096 ORTHO05D000045 9.8e-11 71.6 103 35.9
Phvul.008G074400 Phaseolus vulgaris HOM05D000096 ORTHO05D000045 1.7e-10 70.9 128 32.8
Zm00001eb373410 Zea mays HOM05D008064 ORTHO05D000045 1.7e-10 70.9 118 33.9
EL10Ac4g07894 Beta vulgaris HOM05D000096 ORTHO05D000045 2.2e-10 70.5 122 38.5
Oeu061729.1 Olea europaea HOM05D000096 ORTHO05D000045 2.2e-10 70.5 99 38.4
SGA_v2.0_scaffold183G39859 Striga asiatica HOM05D000096 ORTHO05D000045 2.2e-10 70.5 117 35.9
FvH4_5g25551 Fragaria vesca HOM05D000096 ORTHO05D000045 2.9e-10 70.1 124 33.9
Oeu054515.1 Olea europaea HOM05D000096 ORTHO05D000045 2.9e-10 70.1 69 46.4
PSO210G0169 Papaver somniferum HOM05D000096 ORTHO05D000045 3.7e-10 69.7 122 33.6
COL.COLO4_35927 Corchorus olitorius HOM05D000096 ORTHO05D000045 6.4e-10 68.9 108 34.3
CAN.G93.7 Capsicum annuum HOM05D000096 ORTHO05D000045 1.9e-09 67.4 62 56.5
Oeu055986.1 Olea europaea HOM05D000096 ORTHO05D000045 1.9e-09 67.4 66 43.9
PSO832G3507 Papaver somniferum HOM05D000096 ORTHO05D000045 2.4e-09 67.0 116 33.6
Oeu027785.3 Olea europaea HOM05D000096 ORTHO05D000045 4.1e-09 66.2 74 43.2
EL10Ac1g01711 Beta vulgaris HOM05D000096 ORTHO05D000045 9.2e-09 65.1 102 39.2
EL10Ac8g19546 Beta vulgaris HOM05D000096 ORTHO05D000045 9.2e-09 65.1 110 35.5
PSO063G0288 Papaver somniferum HOM05D000096 ORTHO05D000045 1.2e-08 64.7 116 34.5
PSO063G4809 Papaver somniferum HOM05D000096 ORTHO05D000045 1.2e-08 64.7 116 34.5
CANSAT64G1799 Cannabis sativa HOM05D000096 ORTHO05D000045 4.6e-08 62.8 57 54.4
CAN.G741.30 Capsicum annuum HOM05D000096 ORTHO05D000045 6.0e-08 62.4 68 45.6
BraA02t08215Z Brassica rapa HOM05D000096 ORTHO05D000045 1.3e-07 61.2 191 29.3
AUR62041752 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.3e-07 61.2 98 37.8
AUR62044577 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.3e-07 61.2 98 37.8
BraA07t28121Z Brassica rapa HOM05D000096 ORTHO05D000045 3.0e-07 60.1 145 30.3
ECA236G4996 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.0e-07 60.1 118 33.1
RcHm_v2.0_Chr2g0140301 Rosa chinensis HOM05D000096 ORTHO05D000045 3.0e-07 60.1 93 37.6
SGA_v2.0_scaffold24G10705 Striga asiatica HOM05D018457 ORTHO05D000045 3.0e-07 60.1 196 27.0
SGA_v2.0_scaffold32G13337 Striga asiatica HOM05D018457 ORTHO05D000045 3.0e-07 60.1 196 27.0
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 3.0e-07 60.1 110 30.9
C09p27110 Brassica napus HOM05D000096 ORTHO05D000045 6.6e-07 58.9 145 31.0
BolC8t47057H Brassica oleracea HOM05D000096 ORTHO05D000045 6.6e-07 58.9 145 31.0
Oeu004075.1 Olea europaea HOM05D000096 ORTHO05D000045 2.5e-06 57.0 109 33.9
PSO700G0156 Papaver somniferum HOM05D000096 ORTHO05D000045 2.5e-06 57.0 86 37.2
C07p07960 Brassica napus HOM05D000096 ORTHO05D000045 7.3e-06 55.5 143 29.4
A10p14220 Brassica napus HOM05D000096 ORTHO05D000045 9.5e-06 55.1 155 29.7
Oeu005211.1 Olea europaea HOM05D000423 ORTHO05D000284 9.5e-06 55.1 50 52.0


User provided reference genes

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