Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 0.0e+00 1363.2 664 100.0
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 7.4e-188 661.4 723 50.9
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 5.3e-186 655.2 689 52.5
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 1.5e-156 557.4 658 49.2
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 1.3e-139 501.1 680 44.1
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 1.2e-137 494.6 717 41.3
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 4.6e-137 492.7 616 46.6
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 1.0e-136 491.5 685 43.6
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 1.0e-136 491.5 680 44.1
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 1.9e-135 487.3 682 44.1
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 2.5e-135 486.9 688 43.5
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 4.3e-135 486.1 689 44.7
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 5.8e-132 475.7 681 42.0
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 7.5e-132 475.3 681 41.6
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 1.3e-131 474.6 692 43.4
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 2.9e-131 473.4 679 42.1
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 1.3e-128 464.5 675 41.0
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 1.7e-128 464.2 675 42.1
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 3.0e-128 463.4 679 41.1
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 8.6e-128 461.8 687 42.2
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 1.9e-127 460.7 715 41.4
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 4.3e-127 459.5 689 42.1
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 2.8e-126 456.8 680 42.5
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 8.1e-126 455.3 680 42.4
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 2.3e-125 453.8 684 39.9
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 4.4e-124 449.5 717 40.6
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 2.9e-123 446.8 635 42.8
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 3.7e-123 446.4 675 39.7
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 5.4e-122 442.6 673 39.5
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 1.2e-121 441.4 683 37.8
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 1.0e-120 438.3 655 42.0
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 1.7e-120 437.6 679 40.6
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 3.0e-120 436.8 684 40.2
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 3.0e-120 436.8 690 40.6
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 6.6e-120 435.6 669 40.1
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 4.3e-119 433.0 736 38.7
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 7.3e-119 432.2 694 40.6
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 7.3e-119 432.2 696 39.4
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 1.4e-117 427.9 681 40.1
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 5.2e-117 426.0 650 42.5
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 6.8e-117 425.6 668 40.1
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 8.9e-117 425.2 671 39.9
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 1.6e-113 414.5 674 39.2
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 2.1e-113 414.1 684 40.8
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 6.0e-113 412.5 567 43.2
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 1.9e-111 407.5 691 39.1
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 5.6e-111 406.0 677 37.8
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 9.0e-109 398.7 470 46.4
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 1.5e-108 397.9 691 39.7
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 2.9e-107 393.7 507 44.2
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 1.4e-106 391.3 631 39.9
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 2.1e-105 387.5 581 42.3
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 4.6e-105 386.3 671 37.0
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 6.0e-105 386.0 545 43.9
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 1.0e-104 385.2 554 42.6
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 1.0e-104 385.2 505 43.8
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 1.3e-104 384.8 693 37.2
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 1.9e-103 380.9 492 42.7
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 3.0e-96 357.1 668 36.4
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 3.0e-96 357.1 661 36.6
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 1.4e-93 348.2 663 35.4
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 3.1e-93 347.1 667 34.9
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 9.0e-93 345.5 663 35.7
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 5.8e-92 342.8 468 42.3
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 4.9e-91 339.7 662 38.1
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 4.2e-90 336.7 688 35.3
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 4.6e-89 333.2 507 41.0
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 9.6e-87 325.5 657 33.6
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 1.4e-85 321.6 656 34.1
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 3.1e-85 320.5 706 34.4
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 3.1e-85 320.5 650 34.8
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 2.2e-83 314.3 675 35.1
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 3.8e-83 313.5 524 40.3
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 3.2e-82 310.5 398 43.5
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 3.9e-80 303.5 671 32.9
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 1.1e-79 302.0 386 42.2
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 4.1e-77 293.5 350 48.3
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 6.9e-77 292.7 665 35.2
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 8.5e-75 285.8 550 34.5
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 6.1e-73 279.6 520 34.8
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 1.0e-72 278.9 520 34.8
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 3.0e-72 277.3 516 34.9
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 1.1e-69 268.9 751 30.2
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 2.4e-69 267.7 372 44.6
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 4.5e-68 263.5 363 47.4
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 6.7e-64 249.6 324 42.3
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 3.3e-63 247.3 442 37.1
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 3.3e-63 247.3 379 43.3
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 1.7e-59 235.0 359 36.5
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 3.6e-57 227.3 296 42.6
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 1.4e-53 215.3 207 52.7
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 1.2e-52 212.2 356 38.8
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 3.8e-51 207.2 372 38.2
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.2e-49 202.2 287 40.1
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 3.6e-49 200.7 293 40.3
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 1.2e-47 195.7 385 37.4
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 2.2e-46 191.4 346 34.4
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 3.1e-45 187.6 226 45.6
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 1.6e-44 185.3 202 50.0
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.2e-41 175.6 254 41.7
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 2.0e-39 168.3 243 40.3
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 2.4e-37 161.4 298 35.2
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 7.8e-36 156.4 484 27.1
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.9e-35 154.5 281 35.2
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.4e-29 134.8 315 34.6
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 2.0e-28 131.7 245 37.1
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 3.6e-25 120.9 265 32.5
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 4.7e-25 120.6 149 50.3
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 8.6e-19 99.8 169 34.9
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 1.6e-17 95.5 226 35.4
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.7e-12 78.2 148 38.5
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 7.3e-10 70.1 50 64.0
MCO04G092 Micromonas commoda HOM05D004492 ORTHO05D005602 1.4e-08 65.9 139 36.0
MCO09G489 Micromonas commoda HOM05D006715 ORTHO05D008345 5.2e-08 63.9 319 25.1
MCO14G073 Micromonas commoda HOM05D004492 ORTHO05D005602 5.2e-08 63.9 345 24.6
Rhsim01G0183300 Rhododendron simsii HOM05D006673 ORTHO05D008458 5.2e-08 63.9 322 26.4
CSS0011701 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.7e-06 58.9 32 71.9
Thecc.08G119400 Theobroma cacao HOM05D004492 ORTHO05D005602 2.2e-06 58.5 139 30.2
QL02p038810 Quercus lobata HOM05D006715 ORTHO05D008345 2.9e-06 58.2 155 29.7
Pp3c11_18790 Physcomitrium patens HOM05D003388 ORTHO05D003616 3.8e-06 57.8 149 26.8
HPP92_007854 Vanilla planifolia HOM05D003388 ORTHO05D003616 3.8e-06 57.8 88 35.2
SEGI_02927 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 4.9e-06 57.4 226 24.8
SalBow2G1725 Salvia bowleyana HOM05D003388 ORTHO05D003616 6.4e-06 57.0 63 42.9
AL1G38950 Arabidopsis lyrata HOM05D003388 ORTHO05D003616 8.4e-06 56.6 73 35.6
TWI75G1739 Tripterygium wilfordii HOM05D003388 ORTHO05D003616 8.4e-06 56.6 81 30.9


User provided reference genes

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