Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 2.2e-137 492.3 241 100.0
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 4.4e-98 361.7 241 73.9
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 7.0e-96 354.4 241 73.4
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 1.2e-95 353.6 241 73.9
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 1.3e-94 350.1 244 74.6
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 1.7e-94 349.7 244 72.5
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 3.9e-94 348.6 244 72.5
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 6.6e-94 347.8 243 72.8
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 2.5e-93 345.9 260 67.7
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 7.3e-93 344.4 239 70.3
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 1.6e-92 343.2 239 71.1
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 3.6e-92 342.0 243 71.6
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 3.6e-92 342.0 243 71.2
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 3.1e-91 339.0 240 68.3
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 6.8e-91 337.8 240 68.3
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 1.5e-90 336.7 243 66.7
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 1.5e-90 336.7 245 71.4
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 7.5e-90 334.3 241 68.9
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 3.7e-89 332.0 241 68.9
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 4.9e-89 331.6 241 68.5
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 1.1e-88 330.5 241 68.9
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 1.1e-88 330.5 241 68.9
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 1.4e-88 330.1 238 71.0
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.9e-88 329.7 240 68.3
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 2.4e-88 329.3 231 69.3
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 2.4e-88 329.3 241 67.6
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 3.2e-88 328.9 241 68.0
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 9.2e-88 327.4 232 69.0
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 4.6e-87 325.1 241 66.8
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 1.0e-86 323.9 238 68.1
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 1.0e-86 323.9 241 66.8
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 2.3e-86 322.8 239 66.9
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 2.3e-86 322.8 234 67.5
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 3.0e-86 322.4 240 65.0
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 3.0e-86 322.4 233 67.0
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 3.9e-86 322.0 239 67.4
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 5.1e-86 321.6 241 66.8
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 1.1e-85 320.5 239 67.4
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 1.5e-85 320.1 236 68.6
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 1.5e-85 320.1 239 67.4
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 2.5e-85 319.3 240 68.3
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 4.3e-85 318.5 240 63.3
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 5.6e-85 318.2 244 66.4
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 7.3e-85 317.8 230 66.1
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 7.3e-85 317.8 239 67.8
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 1.2e-84 317.0 234 66.2
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.6e-84 316.6 239 65.7
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 2.1e-84 316.2 234 67.5
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 2.8e-84 315.8 234 66.2
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 6.2e-84 314.7 239 65.3
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 1.1e-83 313.9 239 67.8
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 1.8e-83 313.2 240 67.1
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 1.8e-83 313.2 271 60.9
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 1.8e-83 313.2 240 64.2
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 2.3e-83 312.8 233 68.7
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 2.3e-83 312.8 242 66.1
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 3.1e-83 312.4 238 66.8
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 4.0e-83 312.0 242 66.5
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 6.8e-83 311.2 233 68.2
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 2.0e-82 309.7 244 65.6
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 3.4e-82 308.9 241 64.7
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 4.4e-82 308.5 235 66.0
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 5.8e-82 308.1 242 64.0
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 7.6e-82 307.8 241 66.0
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 7.6e-82 307.8 233 67.4
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 7.6e-82 307.8 242 64.5
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 7.6e-82 307.8 240 64.2
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 9.9e-82 307.4 243 66.7
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 1.3e-81 307.0 245 64.5
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 1.7e-81 306.6 234 65.8
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 1.7e-81 306.6 242 64.0
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 1.7e-81 306.6 235 66.0
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 2.2e-81 306.2 242 66.1
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 2.2e-81 306.2 242 66.1
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 2.9e-81 305.8 195 73.8
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 2.9e-81 305.8 239 64.0
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 3.7e-81 305.4 239 64.0
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 4.9e-81 305.1 235 64.7
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 6.4e-81 304.7 233 68.2
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 6.4e-81 304.7 242 66.1
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 1.1e-80 303.9 240 65.4
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 1.4e-80 303.5 241 63.9
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 2.4e-80 302.8 240 63.3
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 4.1e-80 302.0 231 63.6
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 1.2e-79 300.4 235 64.7
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 1.2e-79 300.4 241 63.5
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 1.6e-79 300.1 246 60.6
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 1.6e-79 300.1 240 62.9
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 2.1e-79 299.7 246 61.4
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 1.0e-78 297.4 216 69.4
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 1.0e-78 297.4 239 63.2
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 1.3e-78 297.0 235 65.5
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 2.3e-78 296.2 238 62.6
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 3.0e-78 295.8 241 61.8
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 3.9e-78 295.4 248 63.7
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 5.1e-78 295.0 241 62.2
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 1.5e-77 293.5 217 67.3
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.5e-77 293.5 241 61.8
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 4.3e-77 292.0 236 64.0
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 3.1e-75 285.8 273 56.0
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 2.0e-74 283.1 187 73.3
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 4.4e-74 282.0 197 70.6
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 2.2e-73 279.6 243 61.3
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 1.1e-72 277.3 245 59.6
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 3.2e-72 275.8 240 59.6
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 1.3e-70 270.4 235 59.1
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 4.9e-65 251.9 234 60.7
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 2.7e-63 246.1 217 59.0
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 1.3e-62 243.8 196 61.7
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 8.7e-62 241.1 192 61.5
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 1.9e-61 240.0 139 79.9
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 7.4e-61 238.0 194 60.3
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 1.6e-60 236.9 226 58.0
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 8.1e-60 234.6 129 84.5
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 6.9e-59 231.5 141 75.9
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 7.6e-58 228.0 225 54.7
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 3.8e-57 225.7 139 74.8
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 8.1e-52 208.0 224 52.7
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 4.0e-51 205.7 126 76.2
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 6.5e-49 198.4 139 68.3
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 2.3e-46 189.9 217 49.8
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 1.5e-42 177.2 145 61.4
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 4.6e-39 165.6 148 58.8
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 1.8e-38 163.7 129 64.3
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 2.8e-36 156.4 110 66.4
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 3.8e-33 146.0 79 88.6
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 3.2e-32 142.9 143 49.7
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 2.2e-25 120.2 73 76.7
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 2.9e-09 66.6 40 77.5
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 4.0e-06 56.2 45 60.0


User provided reference genes

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