Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11154 Striga asiatica HOM05D067524 ORTHO05D051410 2.5e-89 332.0 162 100.0
SGA_v2.0_scaffold25G11153 Striga asiatica HOM05D067524 ORTHO05D051410 4.0e-18 95.5 52 84.6
MSTRG.24185 Avicennia marina HOM05D000095 ORTHO05D011502 6.5e-13 78.2 95 42.1
SalBow6G6783 Salvia bowleyana HOM05D000095 ORTHO05D000330 8.0e-11 71.2 72 47.2
Migut.N03245 Erythranthe guttata HOM05D000095 ORTHO05D000330 1.4e-10 70.5 82 43.9
SalBow1G7512 Salvia bowleyana HOM05D000095 ORTHO05D357456 1.4e-10 70.5 112 40.2
Ah.16g103080 Amaranthus hybridus HOM05D000095 ORTHO05D000330 2.8e-08 62.8 80 41.2
Cc07_g12570 Coffea canephora HOM05D000095 ORTHO05D000330 6.3e-08 61.6 48 50.0
Cc07_g18210 Coffea canephora HOM05D000095 ORTHO05D000330 1.1e-07 60.8 48 50.0
Lalb_Chr15g0084321 Lupinus albus HOM05D000095 ORTHO05D000330 1.2e-06 57.4 64 46.9
PGR102G3307 Punica granatum HOM05D000095 ORTHO05D000330 1.6e-06 57.0 59 50.8
Thecc.10G026700 Theobroma cacao HOM05D000095 ORTHO05D000330 2.0e-06 56.6 64 45.3
vmacro05399 Vaccinium macrocarpon HOM05D000095 ORTHO05D000330 2.0e-06 56.6 48 50.0
CSS0011082 Camellia sinensis var. sinensis HOM05D000095 ORTHO05D000330 2.7e-06 56.2 60 45.0
Duzib114G0730 Durio zibethinus HOM05D000095 ORTHO05D000330 3.5e-06 55.8 62 48.4
Lalb_Chr17g0346581 Lupinus albus HOM05D000095 ORTHO05D000330 4.5e-06 55.5 65 44.6
Nitab4.5_0001932g0010 Nicotiana tabacum HOM05D000095 ORTHO05D000330 4.5e-06 55.5 62 45.2
Rhsim10G0187000 Rhododendron simsii HOM05D000095 ORTHO05D000330 4.5e-06 55.5 60 46.7
TWI74G0644 Tripterygium wilfordii HOM05D000095 ORTHO05D000330 4.5e-06 55.5 76 38.2
Actinidia35697 Actinidia chinensis HOM05D000095 ORTHO05D000330 5.9e-06 55.1 48 43.8
Duzib106G0516 Durio zibethinus HOM05D000095 ORTHO05D000330 5.9e-06 55.1 64 45.3
Gohir.D12G136200 Gossypium hirsutum HOM05D000095 ORTHO05D000330 5.9e-06 55.1 59 45.8
Gorai.008G147400 Gossypium raimondii HOM05D000095 ORTHO05D000330 5.9e-06 55.1 59 45.8
Lalb_Chr22g0354741 Lupinus albus HOM05D000095 ORTHO05D000534 5.9e-06 55.1 59 42.4
Potri.001G219100 Populus trichocarpa HOM05D000095 ORTHO05D000330 5.9e-06 55.1 57 50.9
Prupe.6G271600 Prunus persica HOM05D000095 ORTHO05D000330 5.9e-06 55.1 64 45.3
QL01p000848 Quercus lobata HOM05D000095 ORTHO05D000330 5.9e-06 55.1 48 47.9
unitig_27.g24824 Utricularia gibba HOM05D000095 ORTHO05D000330 5.9e-06 55.1 75 37.3
CAN.G143.6 Capsicum annuum HOM05D000095 ORTHO05D000330 7.7e-06 54.7 59 44.1
Ca_22761_v3 Cicer arietinum L. HOM05D000095 ORTHO05D013214 7.7e-06 54.7 57 42.1
Ca_22762_v3 Cicer arietinum L. HOM05D000095 ORTHO05D000330 7.7e-06 54.7 57 42.1
Dinv28274 Davidia involucrata HOM05D000095 ORTHO05D000330 7.7e-06 54.7 63 42.9
Nitab4.5_0000146g0050 Nicotiana tabacum HOM05D000095 ORTHO05D000330 7.7e-06 54.7 62 45.2
Phvul.001G240300 Phaseolus vulgaris HOM05D000095 ORTHO05D000330 7.7e-06 54.7 64 43.8


User provided reference genes

Program Settings