Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11145 Striga asiatica HOM05D002903 ORTHO05D003066 1.3e-137 493.0 253 100.0
SGA_v2.0_scaffold28G11961 Striga asiatica HOM05D002903 ORTHO05D003066 1.5e-35 154.1 168 56.0
SGA_v2.0_scaffold63G21843 Striga asiatica HOM05D002903 ORTHO05D003066 1.5e-35 154.1 158 58.2
Oeu047153.1 Olea europaea HOM05D002903 ORTHO05D003066 2.3e-25 120.2 207 44.4
MSTRG.24179 Avicennia marina HOM05D002903 ORTHO05D003066 5.2e-25 119.0 270 37.8
Oeu045975.1 Olea europaea HOM05D002903 ORTHO05D003066 3.4e-24 116.3 201 43.3
MSTRG.1394 Avicennia marina HOM05D002903 ORTHO05D003066 8.3e-23 111.7 218 39.9
Lj7P356T43 Lonicera japonica HOM05D002903 ORTHO05D003066 8.3e-23 111.7 235 38.3
Glyma.14G158800 Glycine max HOM05D002903 ORTHO05D003066 1.5e-19 100.9 210 39.0
VMungo1309G2413 Vigna mungo HOM05D002903 ORTHO05D003066 1.5e-19 100.9 233 36.1
Phvul.009G132400 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 3.3e-19 99.8 238 36.6
VMungo0647G0886 Vigna mungo HOM05D002903 ORTHO05D003066 9.5e-19 98.2 220 38.6
Glyma.13G036100 Glycine max HOM05D002903 ORTHO05D003066 1.6e-18 97.4 214 37.4
Glyma.06G119800 Glycine max HOM05D002903 ORTHO05D003066 2.1e-18 97.1 248 36.3
MSTRG.25346 Avicennia marina HOM05D002903 ORTHO05D003066 3.6e-18 96.3 195 36.9
Phvul.001G065100 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 4.7e-18 95.9 240 37.1
SalBow6G1573 Salvia bowleyana HOM05D002903 ORTHO05D003066 8.1e-18 95.1 225 35.1
Hma1.2p1_1125F.1_g259580 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 2.4e-17 93.6 210 37.6
Migut.N03253 Erythranthe guttata HOM05D002903 ORTHO05D003066 4.0e-17 92.8 225 35.6
Dinv41151 Davidia involucrata HOM05D002903 ORTHO05D003066 1.2e-16 91.3 208 37.5
Lj1g0027406 Lotus japonicus HOM05D002903 ORTHO05D003066 1.2e-16 91.3 220 34.1
SalBow7G1710 Salvia bowleyana HOM05D002903 ORTHO05D003066 2.0e-16 90.5 160 40.6
Actinidia03429 Actinidia chinensis HOM05D002903 ORTHO05D003066 5.8e-16 89.0 179 40.8
Cc10_g13350 Coffea canephora HOM05D002903 ORTHO05D003066 7.6e-16 88.6 259 34.7
SGA_v2.0_scaffold24G10395 Striga asiatica HOM05D002903 ORTHO05D003066 9.9e-16 88.2 165 42.4
Gohir.D02G076000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.3e-15 87.8 225 36.4
Gorai.005G085300 Gossypium raimondii HOM05D002903 ORTHO05D003066 1.3e-15 87.8 225 36.4
Medtr1g029550 Medicago truncatula HOM05D002903 ORTHO05D003066 1.3e-15 87.8 254 32.7
CiPaw.15G024600 Carya illinoinensis HOM05D002903 ORTHO05D003066 1.7e-15 87.4 253 34.4
Haze_17666 Corylus avellana HOM05D002903 ORTHO05D003066 2.2e-15 87.0 180 36.1
Glyma.04G243500 Glycine max HOM05D002903 ORTHO05D003066 2.2e-15 87.0 250 34.0
Dinv25773 Davidia involucrata HOM05D002903 ORTHO05D003066 2.9e-15 86.7 270 33.7
Lalb_Chr08g0240931 Lupinus albus HOM05D002903 ORTHO05D003066 3.8e-15 86.3 279 32.6
SGA_v2.0_scaffold48G17917 Striga asiatica HOM05D002903 ORTHO05D003066 3.8e-15 86.3 181 39.8
CSS0044801 Camellia sinensis var. sinensis HOM05D002903 ORTHO05D003066 1.4e-14 84.3 184 37.0
ClCG08G006250 Citrullus lanatus HOM05D002903 ORTHO05D003066 1.9e-14 84.0 228 35.5
RcHm_v2.0_Chr6g0278041 Rosa chinensis HOM05D002903 ORTHO05D003066 1.9e-14 84.0 294 31.0
Lalb_Chr10g0101441 Lupinus albus HOM05D002903 ORTHO05D003066 9.2e-14 81.6 191 31.9
Eucgr.F02770 Eucalyptus grandis HOM05D002903 ORTHO05D003066 1.2e-13 81.3 260 32.7
CSS0044741 Camellia sinensis var. sinensis HOM05D002903 ORTHO05D003066 1.6e-13 80.9 201 33.8
CiPaw.16G019600 Carya illinoinensis HOM05D002903 ORTHO05D003066 1.6e-13 80.9 240 29.6
Thecc.08G137400 Theobroma cacao HOM05D002903 ORTHO05D003066 1.6e-13 80.9 216 34.3
Cfa018400 Carpinus fangiana HOM05D002903 ORTHO05D003066 2.7e-13 80.1 237 32.5
FvH4_2g15290 Fragaria vesca HOM05D002903 ORTHO05D003066 2.7e-13 80.1 246 33.3
Potri.002G075400 Populus trichocarpa HOM05D002903 ORTHO05D003066 2.7e-13 80.1 181 34.8
QL09p029695 Quercus lobata HOM05D002903 ORTHO05D003066 3.5e-13 79.7 186 33.3
Sabra05G0141500 Salix brachista HOM05D002903 ORTHO05D003066 3.5e-13 79.7 193 32.6
Solyc06g059860.3 Solanum lycopersicum HOM05D002903 ORTHO05D003066 3.5e-13 79.7 223 34.1
Lsat_1_v5_gn_1_9061 Lactuca sativa HOM05D002903 ORTHO05D003066 4.6e-13 79.3 221 33.9
PGSC0003DMG400013037 Solanum tuberosum HOM05D002903 ORTHO05D003066 4.6e-13 79.3 162 36.4
TWI60G0469 Tripterygium wilfordii HOM05D002903 ORTHO05D003066 4.6e-13 79.3 184 34.8
Duzib093G1863 Durio zibethinus HOM05D002903 ORTHO05D003066 6.0e-13 79.0 259 30.9
FAN24G3523 Fragaria x ananassa HOM05D002903 ORTHO05D003066 6.0e-13 79.0 246 32.5
Psat6g040160 Pisum sativum HOM05D002903 ORTHO05D003066 6.0e-13 79.0 259 29.3
Nn1g06302 Nelumbo nucifera HOM05D002903 ORTHO05D003066 7.8e-13 78.6 211 34.1
THA.LOC104812056 Tarenaya hassleriana HOM05D002903 ORTHO05D003066 7.8e-13 78.6 209 33.5
Duzib041G0628 Durio zibethinus HOM05D002903 ORTHO05D003066 1.0e-12 78.2 212 33.0
THA.LOC104813698 Tarenaya hassleriana HOM05D002903 ORTHO05D003066 1.0e-12 78.2 141 39.0
AL1G34490 Arabidopsis lyrata HOM05D002903 ORTHO05D003066 1.3e-12 77.8 145 36.6
FAN20G1459 Fragaria x ananassa HOM05D002903 ORTHO05D003066 1.3e-12 77.8 253 33.2
Sopen06g019940 Solanum pennellii HOM05D002903 ORTHO05D003066 1.3e-12 77.8 205 34.6
Oeu001551.1 Olea europaea HOM05D002903 ORTHO05D003066 2.3e-12 77.0 185 33.5
Sed0005775 Sechium edule HOM05D002903 ORTHO05D003066 2.3e-12 77.0 201 38.3
Ca_16630_v3 Cicer arietinum L. HOM05D002903 ORTHO05D003066 3.0e-12 76.6 235 31.9
Gohir.A02G069300 Gossypium hirsutum HOM05D002903 ORTHO05D003066 3.0e-12 76.6 225 34.2
Nitab4.5_0008281g0010 Nicotiana tabacum HOM05D002903 ORTHO05D003066 3.0e-12 76.6 191 36.6
Peaxi162Scf00505g00053 Petunia axillaris HOM05D002903 ORTHO05D003066 5.1e-12 75.9 200 34.5
TWI32G0321 Tripterygium wilfordii HOM05D002903 ORTHO05D003066 6.6e-12 75.5 208 33.2
Solyc08g080860.4 Solanum lycopersicum HOM05D002903 ORTHO05D003066 8.7e-12 75.1 179 37.4
TAR625G1102 Trochodendron aralioides HOM05D002903 ORTHO05D003066 8.7e-12 75.1 210 32.9
Thhalv10019082m.g Eutrema salsugineum HOM05D002903 ORTHO05D003066 1.9e-11 73.9 195 35.9
Manes.02G172300 Manihot esculenta HOM05D002903 ORTHO05D003066 1.9e-11 73.9 190 34.7
BraA06t24841Z Brassica rapa HOM05D002903 ORTHO05D003066 2.5e-11 73.6 208 35.1
Gohir.D05G241400 Gossypium hirsutum HOM05D002903 ORTHO05D003066 2.5e-11 73.6 139 37.4
Gorai.009G250800 Gossypium raimondii HOM05D002903 ORTHO05D003066 2.5e-11 73.6 139 37.4
Prupe.8G011500 Prunus persica HOM05D002903 ORTHO05D003066 2.5e-11 73.6 117 44.4
Cpa.g.sc26.66 Carica papaya HOM05D002903 ORTHO05D003066 3.3e-11 73.2 235 33.2
A06p17430 Brassica napus HOM05D000744 ORTHO05D000332 4.3e-11 72.8 147 37.4
FAN27G1654 Fragaria x ananassa HOM05D002903 ORTHO05D003066 4.3e-11 72.8 259 32.0
BcaC05g26046 Brassica carinata HOM05D002903 ORTHO05D003066 5.6e-11 72.4 185 34.6
MELO3C008433.2 Cucumis melo HOM05D002903 ORTHO05D003066 5.6e-11 72.4 201 35.3
FAN15G2216 Fragaria x ananassa HOM05D002903 ORTHO05D003066 5.6e-11 72.4 242 32.6
Gohir.A02G112000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 5.6e-11 72.4 246 30.9
Nn5g28499 Nelumbo nucifera HOM05D002903 ORTHO05D003066 5.6e-11 72.4 230 33.5
Aa31LG7G5510 Aethionema arabicum HOM05D002903 ORTHO05D003066 9.6e-11 71.6 187 34.2
BcaB07g32128 Brassica carinata HOM05D002903 ORTHO05D003066 9.6e-11 71.6 208 34.6
MBI03_g20844_MAGBIO Magnolia biondii HOM05D002903 ORTHO05D003066 9.6e-11 71.6 193 31.6
TPR.G6299 Trifolium pratense HOM05D002903 ORTHO05D003066 9.6e-11 71.6 221 31.2
COL.COLO4_38160 Corchorus olitorius HOM05D002903 ORTHO05D003066 1.2e-10 71.2 177 33.9
Carub.0002s2388 Capsella rubella HOM05D002903 ORTHO05D003066 1.6e-10 70.9 216 32.9
C05p20270 Brassica napus HOM05D000744 ORTHO05D000332 2.1e-10 70.5 187 34.2
BolC5t30721H Brassica oleracea HOM05D002903 ORTHO05D003066 2.1e-10 70.5 187 34.2
Carub.0001s2080 Capsella rubella HOM05D002903 ORTHO05D003066 2.1e-10 70.5 137 38.7
Manes.18G084700 Manihot esculenta HOM05D002903 ORTHO05D003066 2.1e-10 70.5 236 30.1
C06p31570 Brassica napus HOM05D000744 ORTHO05D000332 2.8e-10 70.1 185 36.8
Gohir.A05G240200 Gossypium hirsutum HOM05D002903 ORTHO05D003066 2.8e-10 70.1 188 35.6
vmacro00875 Vaccinium macrocarpon HOM05D002903 ORTHO05D003066 2.8e-10 70.1 186 35.5
MELO3C010580.2 Cucumis melo HOM05D002903 ORTHO05D003066 3.6e-10 69.7 159 37.7
Peaxi162Scf00119g00051 Petunia axillaris HOM05D002903 ORTHO05D003066 3.6e-10 69.7 130 43.1
Sopen08g029160 Solanum pennellii HOM05D002903 ORTHO05D003066 3.6e-10 69.7 184 35.9
TPR.G30561 Trifolium pratense HOM05D002903 ORTHO05D003066 3.6e-10 69.7 212 32.5
TAR376G0422 Trochodendron aralioides HOM05D002903 ORTHO05D003066 3.6e-10 69.7 217 32.3
BcaC08g45488 Brassica carinata HOM05D000744 ORTHO05D000332 4.7e-10 69.3 182 36.3
BolC6t38286H Brassica oleracea HOM05D002903 ORTHO05D003066 4.7e-10 69.3 182 36.3
ClCG08G003270 Citrullus lanatus HOM05D002903 ORTHO05D003066 4.7e-10 69.3 162 37.0
CsaV3_6G035580 Cucumis sativus L. HOM05D002903 ORTHO05D003066 4.7e-10 69.3 155 36.8
Atru.chr13.1637 Acer truncatum HOM05D002903 ORTHO05D003066 6.2e-10 68.9 73 57.5
A07p28150 Brassica napus HOM05D002903 ORTHO05D003066 1.1e-09 68.2 185 36.2
BraA07t30459Z Brassica rapa HOM05D000744 ORTHO05D003066 1.1e-09 68.2 185 36.2
CsaV3_6G031200 Cucumis sativus L. HOM05D002903 ORTHO05D003066 1.1e-09 68.2 202 35.1
Lj1g0005014 Lotus japonicus HOM05D002903 ORTHO05D003066 1.1e-09 68.2 100 43.0
PGSC0003DMG400012217 Solanum tuberosum HOM05D002903 ORTHO05D003066 1.1e-09 68.2 179 37.4
Aa31LG4G7030 Aethionema arabicum HOM05D002903 ORTHO05D003066 1.4e-09 67.8 199 30.7
Gorai.013G109100 Gossypium raimondii HOM05D002903 ORTHO05D003066 1.4e-09 67.8 250 31.6
BraA07t31783Z Brassica rapa HOM05D002903 ORTHO05D003066 1.8e-09 67.4 202 36.1
DCAR_031493 Daucus carota HOM05D002903 ORTHO05D003066 1.8e-09 67.4 229 32.3
Gohir.D03G062500 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.8e-09 67.4 250 30.8
Sp1g18940 Schrenkiella parvula HOM05D002903 ORTHO05D003066 1.8e-09 67.4 145 36.6
BolC6t40142H Brassica oleracea HOM05D002903 ORTHO05D003066 2.4e-09 67.0 187 33.7
CARHR070490 Cardamine hirsuta HOM05D002903 ORTHO05D003066 2.4e-09 67.0 145 37.2
Aqoxy5G02305 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 3.1e-09 66.6 218 34.9
AT1G21390 Arabidopsis thaliana HOM05D002903 ORTHO05D003066 3.1e-09 66.6 138 37.7
BcaC08g47201 Brassica carinata HOM05D002903 ORTHO05D003066 3.1e-09 66.6 187 33.7
Actinidia15186 Actinidia chinensis HOM05D002903 ORTHO05D003066 4.0e-09 66.2 139 39.6
Nitab4.5_0005642g0020 Nicotiana tabacum HOM05D002903 ORTHO05D003066 4.0e-09 66.2 213 31.5
Rhsim11G0074400 Rhododendron simsii HOM05D002903 ORTHO05D003066 4.0e-09 66.2 82 51.2
TWI34G0043 Tripterygium wilfordii HOM05D002903 ORTHO05D003066 4.0e-09 66.2 151 37.7
HanXRQChr10g0309091 Helianthus annuus HOM05D002903 ORTHO05D003066 5.2e-09 65.9 246 30.1
Nitab4.5_0002270g0020 Nicotiana tabacum HOM05D002903 ORTHO05D003066 6.9e-09 65.5 260 31.2
Potri.005G185200 Populus trichocarpa HOM05D002903 ORTHO05D003066 6.9e-09 65.5 216 30.1
Hma1.2p1_2692F.1_g327010 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 9.0e-09 65.1 203 31.5
Thhalv10008635m.g Eutrema salsugineum HOM05D002903 ORTHO05D003066 1.2e-08 64.7 158 35.4
MBI06_g27454_MAGBIO Magnolia biondii HOM05D002903 ORTHO05D003066 1.2e-08 64.7 192 31.8
Glyma.06G154700 Glycine max HOM05D002903 ORTHO05D003066 1.5e-08 64.3 164 32.9
Actinidia20071 Actinidia chinensis HOM05D002903 ORTHO05D003066 2.0e-08 63.9 162 30.2
BcaB02g07090 Brassica carinata HOM05D002903 ORTHO05D003066 2.0e-08 63.9 213 33.3
CARHR021780 Cardamine hirsuta HOM05D002903 ORTHO05D003066 2.0e-08 63.9 209 31.6
Phvul.009G155800 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 2.0e-08 63.9 152 30.3
Actinidia06611 Actinidia chinensis HOM05D002903 ORTHO05D003066 2.6e-08 63.5 157 29.9
BcaC05g26048 Brassica carinata HOM05D002903 ORTHO05D003066 2.6e-08 63.5 77 51.9
CiPaw.03G119900 Carya illinoinensis HOM05D002903 ORTHO05D003066 2.6e-08 63.5 200 29.5
Sabra02G0058900 Salix brachista HOM05D002903 ORTHO05D003066 3.4e-08 63.2 202 31.2
A07p42590 Brassica napus HOM05D000744 ORTHO05D000332 4.4e-08 62.8 191 35.6
Actinidia10680 Actinidia chinensis HOM05D000744 ORTHO05D000332 5.8e-08 62.4 147 38.1
ECA234G1033 Erigeron canadensis HOM05D002903 ORTHO05D003066 5.8e-08 62.4 59 57.6
MD10G1007900 Malus domestica HOM05D002903 ORTHO05D003066 5.8e-08 62.4 312 28.5
Sed0027661 Sechium edule HOM05D002903 ORTHO05D003066 5.8e-08 62.4 195 36.9
AL2G37140 Arabidopsis lyrata HOM05D002903 ORTHO05D003066 7.6e-08 62.0 213 32.4
AL402U10010 Arabidopsis lyrata HOM05D002903 ORTHO05D003066 7.6e-08 62.0 213 32.4
Sp5g32140 Schrenkiella parvula HOM05D002903 ORTHO05D003066 7.6e-08 62.0 142 38.0
Aqoxy1G01928 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 9.9e-08 61.6 101 46.5
AT1G76980 Arabidopsis thaliana HOM05D002903 ORTHO05D003066 1.7e-07 60.8 218 32.1
VMungo1309G1474 Vigna mungo HOM05D002903 ORTHO05D003066 1.7e-07 60.8 210 28.1
DCAR_010240 Daucus carota HOM05D002903 ORTHO05D003066 2.9e-07 60.1 133 35.3
PGR042G1875 Punica granatum HOM05D002903 ORTHO05D003066 2.9e-07 60.1 233 30.5
arahy.Tifrunner.gnm1.ann1.I47HGM Arachis hypogaea HOM05D002903 ORTHO05D003066 4.9e-07 59.3 123 40.7
C06p51200 Brassica napus HOM05D000744 ORTHO05D000332 4.9e-07 59.3 202 35.6
Medtr3g088815 Medicago truncatula HOM05D002903 ORTHO05D003066 4.9e-07 59.3 148 35.1
arahy.Tifrunner.gnm1.ann1.Y173KB Arachis hypogaea HOM05D002903 ORTHO05D003066 8.4e-07 58.5 124 41.1
CDE08G0104 Ceratophyllum demersum HOM05D002903 ORTHO05D003066 8.4e-07 58.5 199 31.7
Dinv24393 Davidia involucrata HOM05D002903 ORTHO05D003066 8.4e-07 58.5 238 28.6
Sed0028073 Sechium edule HOM05D002903 ORTHO05D003066 8.4e-07 58.5 129 38.8
MD05G1009200 Malus domestica HOM05D002903 ORTHO05D003066 1.1e-06 58.2 312 26.3
Oeu058296.1 Olea europaea HOM05D002903 ORTHO05D003066 1.1e-06 58.2 201 30.3
Dinv19537 Davidia involucrata HOM05D002903 ORTHO05D003066 1.4e-06 57.8 156 31.4
Sed0025902 Sechium edule HOM05D002903 ORTHO05D003066 1.4e-06 57.8 120 40.8
GSVIVG01022345001 Vitis vinifera HOM05D002903 ORTHO05D003066 1.4e-06 57.8 201 29.9
Peaxi162Scf00353g00026 Petunia axillaris HOM05D002903 ORTHO05D003066 2.4e-06 57.0 122 35.2
FAN23G0840 Fragaria x ananassa HOM05D002903 ORTHO05D003066 5.4e-06 55.8 175 31.4
FAN28G2835 Fragaria x ananassa HOM05D002903 ORTHO05D003066 7.1e-06 55.5 175 31.4
Hma1.2p1_0642F.1_g194330 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 7.1e-06 55.5 151 33.1
Gohir.A05G383200 Gossypium hirsutum HOM05D002903 ORTHO05D003066 9.3e-06 55.1 168 29.2


User provided reference genes

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