Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11118 Striga asiatica HOM05D004508 ORTHO05D005180 3.6e-230 801.2 394 100.0
SGA_v2.0_scaffold146G36178 Striga asiatica HOM05D004508 ORTHO05D005180 2.8e-227 791.6 394 99.0
MSTRG.12061 Avicennia marina HOM05D004508 ORTHO05D005180 1.4e-170 603.2 392 74.2
SalBow5G3960 Salvia bowleyana HOM05D004508 ORTHO05D005180 7.1e-170 600.9 382 75.7
SalBow5G2183 Salvia bowleyana HOM05D004508 ORTHO05D005180 2.1e-169 599.4 382 75.7
Nitab4.5_0003534g0110 Nicotiana tabacum HOM05D004508 ORTHO05D005180 1.4e-157 560.1 395 71.1
Dinv37763 Davidia involucrata HOM05D004508 ORTHO05D005180 1.2e-156 557.0 374 71.7
Rhsim07G0101600 Rhododendron simsii HOM05D004508 ORTHO05D005180 2.6e-156 555.8 371 70.4
Solyc08g079470.3 Solanum lycopersicum HOM05D004508 ORTHO05D005180 4.4e-156 555.1 399 70.4
PGSC0003DMG400003935 Solanum tuberosum HOM05D004508 ORTHO05D005180 7.6e-156 554.3 359 74.9
Nitab4.5_0005465g0020 Nicotiana tabacum HOM05D004508 ORTHO05D005180 2.2e-155 552.7 395 70.1
Hma1.2p1_0108F.1_g051860 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 3.8e-155 552.0 370 70.3
Actinidia27434 Actinidia chinensis HOM05D004508 ORTHO05D005180 4.9e-155 551.6 395 68.4
Thecc.03G261800 Theobroma cacao HOM05D004508 ORTHO05D005180 7.1e-154 547.7 374 70.9
Sopen08g027840 Solanum pennellii HOM05D004508 ORTHO05D005180 3.5e-153 545.4 359 73.8
TAR374G1167 Trochodendron aralioides HOM05D004508 ORTHO05D005180 6.0e-153 544.7 359 73.0
CSS0042805 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 2.3e-152 542.7 394 67.0
Cc08_g13230 Coffea canephora HOM05D004508 ORTHO05D005180 2.3e-152 542.7 361 72.0
Cpa.g.sc29.91 Carica papaya HOM05D004508 ORTHO05D005180 3.9e-152 542.0 371 70.6
Hma1.2p1_1654F.1_g295900 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 5.1e-152 541.6 374 69.5
vmacro14042 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 6.6e-152 541.2 367 69.8
Manes.01G073700 Manihot esculenta HOM05D004508 ORTHO05D005180 1.1e-151 540.4 389 69.4
HanXRQChr17g0549071 Helianthus annuus HOM05D004508 ORTHO05D005180 1.5e-151 540.0 368 71.2
Nitab4.5_0007591g0010 Nicotiana tabacum HOM05D004508 ORTHO05D005180 2.5e-151 539.3 395 68.6
Prupe.5G079500 Prunus persica HOM05D004508 ORTHO05D005180 2.5e-151 539.3 392 66.8
CiPaw.11G147500 Carya illinoinensis HOM05D004508 ORTHO05D005180 4.3e-151 538.5 394 67.0
CSS0027133 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 1.3e-150 537.0 360 70.6
CAN.G630.82 Capsicum annuum HOM05D004508 ORTHO05D005180 1.3e-150 537.0 394 68.3
Duzib205G1463 Durio zibethinus HOM05D004508 ORTHO05D005180 1.3e-150 537.0 365 71.2
QL12p014971 Quercus lobata HOM05D004508 ORTHO05D005180 1.3e-150 537.0 377 69.0
Lj8C255T7 Lonicera japonica HOM05D004508 ORTHO05D005180 3.6e-150 535.4 374 70.3
Potri.001G117700 Populus trichocarpa HOM05D004508 ORTHO05D005180 1.4e-149 533.5 363 71.6
Hund14651 Selenicereus undatus HOM05D004508 ORTHO05D005180 4.0e-149 531.9 377 68.7
ClCG10G003140 Citrullus lanatus HOM05D004508 ORTHO05D005180 2.0e-148 529.6 391 66.5
Gohir.D12G223300 Gossypium hirsutum HOM05D004508 ORTHO05D005180 2.6e-148 529.3 387 66.7
RcHm_v2.0_Chr4g0419741 Rosa chinensis HOM05D004508 ORTHO05D005180 2.6e-148 529.3 369 67.8
arahy.Tifrunner.gnm1.ann1.CN31X8 Arachis hypogaea HOM05D004508 ORTHO05D005180 4.5e-148 528.5 375 67.2
EL10Ac5g12616 Beta vulgaris HOM05D004508 ORTHO05D005180 4.5e-148 528.5 372 66.9
Ca_16218_v3 Cicer arietinum L. HOM05D004508 ORTHO05D005180 4.5e-148 528.5 371 67.7
FvH4_5g00670 Fragaria vesca HOM05D004508 ORTHO05D005180 4.5e-148 528.5 371 67.4
Lsat_1_v5_gn_3_3920 Lactuca sativa HOM05D004508 ORTHO05D005180 4.5e-148 528.5 379 69.4
Gohir.A12G221000 Gossypium hirsutum HOM05D004508 ORTHO05D005180 7.6e-148 527.7 387 66.4
Lj2g0024595 Lotus japonicus HOM05D004508 ORTHO05D005180 7.6e-148 527.7 383 66.6
FAN08G3098 Fragaria x ananassa HOM05D004508 ORTHO05D005180 9.9e-148 527.3 371 67.1
Gorai.008G239600 Gossypium raimondii HOM05D004508 ORTHO05D005180 9.9e-148 527.3 387 66.4
CANSAT21G2188 Cannabis sativa HOM05D004508 ORTHO05D005180 1.3e-147 526.9 382 66.0
Medtr3g078637 Medicago truncatula HOM05D004508 ORTHO05D005180 1.3e-147 526.9 369 67.2
Haze_02980 Corylus avellana HOM05D004508 ORTHO05D005180 2.9e-147 525.8 398 65.8
FAN18G1402 Fragaria x ananassa HOM05D004508 ORTHO05D005180 3.8e-147 525.4 371 67.1
Sc07g0009440 Simmondsia chinensis HOM05D004508 ORTHO05D005180 4.9e-147 525.0 376 68.1
arahy.Tifrunner.gnm1.ann1.VMS6QR Arachis hypogaea HOM05D004508 ORTHO05D005180 1.1e-146 523.9 375 66.4
Glyma.11G029800 Glycine max HOM05D004508 ORTHO05D005180 1.9e-146 523.1 379 66.2
Eucgr.D01989 Eucalyptus grandis HOM05D004508 ORTHO05D005180 2.4e-146 522.7 367 68.1
FAN04G0404 Fragaria x ananassa HOM05D004508 ORTHO05D005180 2.4e-146 522.7 369 66.7
Sp6g05370 Schrenkiella parvula HOM05D004508 ORTHO05D005180 4.2e-146 521.9 378 66.4
FAN13G3174 Fragaria x ananassa HOM05D004508 ORTHO05D005180 5.4e-146 521.5 369 66.1
RcHm_v2.0_Chr7g0201591 Rosa chinensis HOM05D004508 ORTHO05D005180 9.3e-146 520.8 369 67.2
Sed0020035 Sechium edule HOM05D004508 ORTHO05D005180 9.3e-146 520.8 367 67.0
Aa31LG9G10340 Aethionema arabicum HOM05D004508 ORTHO05D005180 1.2e-145 520.4 367 67.0
MD04G1079500 Malus domestica HOM05D004508 ORTHO05D005180 1.2e-145 520.4 380 66.1
CARHR254050 Cardamine hirsuta HOM05D004508 ORTHO05D005180 1.6e-145 520.0 394 65.0
unitig_8.g3903 Utricularia gibba HOM05D004508 ORTHO05D005180 2.1e-145 519.6 361 68.1
Aa31LG11G5140 Aethionema arabicum HOM05D004508 ORTHO05D005180 4.6e-145 518.5 367 66.8
Phvul.002G060100 Phaseolus vulgaris HOM05D004508 ORTHO05D005180 7.9e-145 517.7 391 64.5
GSVIVG01004911001 Vitis vinifera HOM05D004508 ORTHO05D005180 1.3e-144 516.9 359 70.5
Peaxi162Scf00271g00023 Petunia axillaris HOM05D004508 ORTHO05D005180 3.0e-144 515.8 372 69.4
CsaV3_3G003200 Cucumis sativus L. HOM05D004508 ORTHO05D005180 3.9e-144 515.4 392 64.5
ECA246G1898 Erigeron canadensis HOM05D004508 ORTHO05D005180 6.7e-144 514.6 373 66.5
BraA03t12150Z Brassica rapa HOM05D004508 ORTHO05D005180 8.7e-144 514.2 369 66.7
BcaB01g01727 Brassica carinata HOM05D004508 ORTHO05D005180 1.1e-143 513.8 386 63.7
Aa31LG11G5170 Aethionema arabicum HOM05D004508 ORTHO05D005180 1.5e-143 513.5 379 65.2
TWI81G0341 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 2.5e-143 512.7 387 66.4
BcaC04g21205 Brassica carinata HOM05D004508 ORTHO05D005180 1.6e-142 510.0 389 63.5
C09p34340 Brassica napus HOM05D004508 ORTHO05D005180 1.6e-142 510.0 389 63.5
BolC9t56277H Brassica oleracea HOM05D004508 ORTHO05D005180 1.6e-142 510.0 389 63.5
Atru.chr9.1431 Acer truncatum HOM05D004508 ORTHO05D005180 2.1e-142 509.6 372 66.9
BolC3t15891H Brassica oleracea HOM05D004508 ORTHO05D005180 4.8e-142 508.4 382 63.9
AT4G12130 Arabidopsis thaliana HOM05D004508 ORTHO05D005180 6.2e-142 508.1 376 64.6
BcaB01g02657 Brassica carinata HOM05D004508 ORTHO05D005180 6.2e-142 508.1 384 64.3
Ah.12g058230 Amaranthus hybridus HOM05D004508 ORTHO05D005180 8.1e-142 507.7 374 64.2
A09p27030 Brassica napus HOM05D004508 ORTHO05D005180 1.1e-141 507.3 388 63.1
BraA09t38274Z Brassica rapa HOM05D004508 ORTHO05D005180 1.1e-141 507.3 388 63.1
Thhalv10028714m.g Eutrema salsugineum HOM05D004508 ORTHO05D005180 1.1e-141 507.3 381 64.8
Ciclev10020216m.g Citrus clementina HOM05D004508 ORTHO05D005180 1.8e-141 506.5 402 63.2
Carub.0006s3132 Capsella rubella HOM05D004508 ORTHO05D005180 2.4e-141 506.1 375 64.8
PSO782G0229 Papaver somniferum HOM05D004508 ORTHO05D005180 2.4e-141 506.1 393 63.4
AL6G47050 Arabidopsis lyrata HOM05D004508 ORTHO05D005180 9.0e-141 504.2 376 63.8
BcaC01g04604 Brassica carinata HOM05D004508 ORTHO05D005180 2.6e-140 502.7 375 65.1
Gorai.003G166400 Gossypium raimondii HOM05D004508 ORTHO05D005180 1.3e-139 500.4 364 68.7
PGR031G2216 Punica granatum HOM05D004508 ORTHO05D005180 2.2e-139 499.6 369 65.3
TWI60G0362 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 3.8e-139 498.8 360 66.9
Oeu016511.2 Olea europaea HOM05D004508 ORTHO05D005180 1.1e-138 497.3 383 65.3
ECA234G2416 Erigeron canadensis HOM05D004508 ORTHO05D005180 1.9e-138 496.5 359 66.3
CDE04G2826 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 2.4e-138 496.1 386 60.9
VMungo1215G0237 Vigna mungo HOM05D004508 ORTHO05D005180 7.9e-137 491.1 376 63.6
Lj4g0011407 Lotus japonicus HOM05D004508 ORTHO05D005180 8.7e-136 487.6 376 63.8
HPP92_014947 Vanilla planifolia HOM05D004508 ORTHO05D005180 1.5e-135 486.9 382 60.5
HPP92_014982 Vanilla planifolia HOM05D004508 ORTHO05D005180 1.5e-135 486.9 382 60.5
AUR62010510 Chenopodium quinoa HOM05D004508 ORTHO05D005180 2.8e-134 482.6 366 63.7
ATR0757G012 Amborella trichopoda HOM05D004508 ORTHO05D005180 5.3e-133 478.4 367 62.9
COL.COLO4_23880 Corchorus olitorius HOM05D004508 ORTHO05D005180 5.8e-132 474.9 373 62.7
Lalb_Chr25g0283101 Lupinus albus HOM05D004508 ORTHO05D005180 2.9e-131 472.6 375 59.7
PSO478G4546 Papaver somniferum HOM05D004508 ORTHO05D005180 3.2e-130 469.2 463 53.3
Sabra01G0090400 Salix brachista HOM05D004508 ORTHO05D005180 5.1e-128 461.8 365 63.8
C03p35810 Brassica napus HOM05D004508 ORTHO05D005180 1.1e-127 460.7 349 64.2
Os06g0134800 Oryza sativa ssp. japonica HOM05D004508 ORTHO05D005180 3.7e-126 455.7 386 58.8
Zm00001eb377920 Zea mays HOM05D004508 ORTHO05D005180 1.4e-122 443.7 374 58.3
SEGI_30484 Sequoiadendron giganteum HOM05D004508 ORTHO05D005180 5.5e-122 441.8 389 56.3
Migut.A00834 Erythranthe guttata HOM05D004508 ORTHO05D005180 2.6e-116 422.9 271 76.8
Pp3c2_10920 Physcomitrium patens HOM05D004508 ORTHO05D005180 1.1e-114 417.5 370 54.1
Pp3c14_15790 Physcomitrium patens HOM05D004508 ORTHO05D005180 5.5e-114 415.2 370 54.1
Nn2g12338 Nelumbo nucifera HOM05D004508 ORTHO05D005180 2.7e-113 412.9 291 69.4
Psat5g109880 Pisum sativum HOM05D004508 ORTHO05D005180 6.1e-113 411.8 290 67.2
Psat1g081320 Pisum sativum HOM05D004508 ORTHO05D005180 3.9e-112 409.1 290 66.6
AagrBONN_evm.TU.Sc2ySwM_344.736 Anthoceros agrestis HOM05D004508 ORTHO05D005180 9.7e-111 404.4 372 54.6
MBI04_g30221_MAGBIO Magnolia biondii HOM05D004508 ORTHO05D005180 2.4e-109 399.8 618 40.0
SMO165G0061 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 7.7e-108 394.8 372 53.2
Mapoly0014s0047 Marchantia polymorpha HOM05D004508 ORTHO05D005180 2.9e-107 392.9 372 51.6
SMO230G0075 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 1.2e-105 387.5 370 51.6
Dinv39078 Davidia involucrata HOM05D004508 ORTHO05D005180 2.1e-105 386.7 354 56.5
CiPaw.12G105000 Carya illinoinensis HOM05D004508 ORTHO05D005180 6.1e-105 385.2 373 55.2
Glyma.01G212000 Glycine max HOM05D004508 ORTHO05D005180 3.0e-104 382.9 251 72.1
Oeu022318.1 Olea europaea HOM05D004508 ORTHO05D005180 3.9e-104 382.5 251 73.3
C07p28450 Brassica napus HOM05D004508 ORTHO05D005180 6.7e-104 381.7 261 67.0
VMungo1215G2974 Vigna mungo HOM05D004508 ORTHO05D005180 2.0e-100 370.2 245 69.8
BolC7t43385H Brassica oleracea HOM05D004508 ORTHO05D005180 1.2e-95 354.4 241 66.8
BcaC06g34438 Brassica carinata HOM05D004508 ORTHO05D005180 2.0e-95 353.6 242 66.5
A03p29560 Brassica napus HOM05D004508 ORTHO05D005180 2.0e-95 353.6 241 66.8
AagrBONN_evm.TU.Sc2ySwM_344.739 Anthoceros agrestis HOM05D004508 ORTHO05D005180 2.6e-95 353.2 372 50.3
AUR62017391 Chenopodium quinoa HOM05D004508 ORTHO05D005180 1.4e-93 347.4 229 69.4
PSO017G0573 Papaver somniferum HOM05D004508 ORTHO05D005180 2.9e-91 339.7 243 64.6
CBR_g46688 Chara braunii HOM05D004508 ORTHO05D005180 1.4e-88 330.9 390 45.6
Gohir.D03G157900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.6e-81 307.4 245 64.5
MELO3C013985.2 Cucumis melo HOM05D004508 ORTHO05D005180 9.8e-79 298.1 190 71.6
Eucgr.D02019 Eucalyptus grandis HOM05D004508 ORTHO05D005180 6.3e-78 295.4 358 45.3
TPR.G214 Trifolium pratense HOM05D004508 ORTHO05D005180 1.8e-64 250.8 156 73.1
Gohir.A03G011900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 8.3e-54 215.3 278 48.6
Lsat_1_v5_gn_3_76480 Lactuca sativa HOM05D004508 ORTHO05D005180 3.2e-53 213.4 217 53.9
AagrBONN_evm.TU.Sc2ySwM_344.731 Anthoceros agrestis HOM05D004508 ORTHO05D005180 1.6e-49 201.1 214 47.7
vmacro17466 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 6.2e-49 199.1 123 74.0
MELO3C021762.2 Cucumis melo HOM05D004508 ORTHO05D005180 1.5e-39 167.9 115 66.1
VMungo1215G1224 Vigna mungo HOM05D004508 ORTHO05D005180 2.1e-36 157.5 150 53.3
Duzib084G0179 Durio zibethinus HOM05D004508 ORTHO05D005180 4.6e-36 156.4 156 52.6
MCO07G558 Micromonas commoda HOM05D004508 ORTHO05D005180 3.9e-35 153.3 401 31.2
CSS0024785 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 7.3e-34 149.1 97 69.1
Nn8g40647 Nelumbo nucifera HOM05D004508 ORTHO05D005180 8.1e-33 145.6 174 48.9
PRCOL_00002067 Prasinoderma coloniale HOM05D004508 ORTHO05D005180 9.9e-31 138.7 371 29.6
Cre10.g459000 Chlamydomonas reinhardtii HOM05D004508 ORTHO05D005180 1.4e-29 134.8 296 32.1
SGA_v2.0_scaffold120G32815 Striga asiatica HOM05D004508 ORTHO05D005180 1.3e-25 121.7 77 75.3
BolC6t40022H Brassica oleracea HOM05D004508 ORTHO05D005180 2.0e-23 114.4 102 54.9
Cfa023844 Carpinus fangiana HOM05D004508 ORTHO05D005180 3.2e-21 107.1 324 28.7
BolC7t43387H Brassica oleracea HOM05D004508 ORTHO05D005180 2.7e-20 104.0 93 55.9
BcaC06g35234 Brassica carinata HOM05D004508 ORTHO05D005180 1.8e-19 101.3 70 64.3
C03p35830 Brassica napus HOM05D004508 ORTHO05D005180 3.9e-19 100.1 93 53.8
C07p28470 Brassica napus HOM05D004508 ORTHO05D005180 4.3e-18 96.7 93 52.7
BolC3t15892H Brassica oleracea HOM05D004508 ORTHO05D005180 7.4e-10 69.3 52 59.6
CDE04G3100 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 2.2e-09 67.8 59 49.2
BcaC06g34436 Brassica carinata HOM05D004508 ORTHO05D005180 1.4e-08 65.1 50 56.0
BolC3t15893H Brassica oleracea HOM05D004508 ORTHO05D005180 9.0e-08 62.4 43 55.8
MELO3C035473.2 Cucumis melo HOM05D040713 ORTHO05D005180 1.2e-07 62.0 43 67.4


User provided reference genes

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