Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 4.4e-77 291.2 144 100.0
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 1.5e-48 196.4 143 71.3
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 2.5e-48 195.7 141 69.5
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 1.1e-38 163.7 123 64.2
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 8.9e-38 160.6 146 57.5
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 2.0e-37 159.5 106 71.7
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 2.0e-37 159.5 119 63.0
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 3.4e-37 158.7 106 71.7
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 4.4e-37 158.3 106 71.7
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 1.7e-36 156.4 109 67.0
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 3.7e-36 155.2 121 66.1
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 3.7e-36 155.2 121 66.1
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 4.9e-36 154.8 114 67.5
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 1.1e-35 153.7 105 68.6
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 1.1e-35 153.7 109 67.9
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 2.4e-35 152.5 109 68.8
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 3.2e-35 152.1 144 56.9
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 3.2e-35 152.1 112 67.9
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 4.1e-35 151.8 98 73.5
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 7.1e-35 151.0 148 56.1
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 7.1e-35 151.0 97 75.3
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 9.2e-35 150.6 100 70.0
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 9.2e-35 150.6 106 70.8
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 9.2e-35 150.6 148 56.1
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 9.2e-35 150.6 110 70.9
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 1.2e-34 150.2 103 72.8
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 1.2e-34 150.2 101 68.3
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 2.1e-34 149.4 107 69.2
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 2.1e-34 149.4 113 64.6
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 2.1e-34 149.4 150 56.0
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 2.7e-34 149.1 110 66.4
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 2.7e-34 149.1 107 66.4
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 3.5e-34 148.7 100 71.0
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 4.6e-34 148.3 115 66.1
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 4.6e-34 148.3 101 70.3
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 6.0e-34 147.9 145 54.5
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 6.0e-34 147.9 106 68.9
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 6.0e-34 147.9 104 70.2
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 7.8e-34 147.5 101 71.3
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 1.0e-33 147.1 114 65.8
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 1.0e-33 147.1 103 68.0
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 1.3e-33 146.7 110 66.4
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 1.3e-33 146.7 106 67.0
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 1.7e-33 146.4 109 67.0
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 2.3e-33 146.0 97 71.1
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 3.0e-33 145.6 112 64.3
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 3.0e-33 145.6 111 65.8
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 3.0e-33 145.6 108 65.7
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 3.0e-33 145.6 106 67.0
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 3.9e-33 145.2 108 66.7
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 5.1e-33 144.8 100 68.0
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 6.6e-33 144.4 102 66.7
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 6.6e-33 144.4 102 66.7
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 8.6e-33 144.1 108 65.7
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 8.6e-33 144.1 108 65.7
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 1.1e-32 143.7 100 67.0
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 1.1e-32 143.7 108 66.7
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 1.1e-32 143.7 115 62.6
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 1.9e-32 142.9 110 62.7
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 1.9e-32 142.9 143 56.6
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 3.3e-32 142.1 108 63.9
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 4.3e-32 141.7 111 66.7
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 7.3e-32 141.0 102 65.7
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 7.3e-32 141.0 102 65.7
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 1.2e-31 140.2 109 66.1
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 1.2e-31 140.2 91 72.5
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 2.1e-31 139.4 92 70.7
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 2.8e-31 139.0 93 67.7
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 4.7e-31 138.3 103 63.1
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 4.7e-31 138.3 107 65.4
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 8.1e-31 137.5 100 67.0
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 1.2e-29 133.7 112 62.5
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 2.0e-29 132.9 101 63.4
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 3.4e-29 132.1 91 63.7
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 5.8e-29 131.3 123 56.9
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 9.9e-29 130.6 104 61.5
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 1.4e-27 126.7 99 60.6
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 3.2e-27 125.6 123 52.8
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 3.2e-27 125.6 83 69.9
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 5.4e-27 124.8 116 55.2
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 1.6e-26 123.2 104 55.8
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 2.1e-26 122.9 92 64.1
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 3.5e-26 122.1 92 65.2
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 4.6e-26 121.7 84 66.7
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 1.7e-25 119.8 82 68.3
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 2.3e-25 119.4 88 65.9
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 8.7e-25 117.5 91 64.8
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 8.7e-25 117.5 92 63.0
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 2.5e-24 115.9 69 73.9
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 3.3e-24 115.5 86 64.0
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 1.2e-23 113.6 86 62.8
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 2.8e-23 112.5 82 65.9
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 4.7e-23 111.7 91 60.4
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 1.1e-22 110.5 94 54.3
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 1.5e-21 106.7 76 60.5
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 2.0e-21 106.3 87 62.1
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 4.4e-21 105.1 80 61.2
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 4.4e-21 105.1 77 62.3
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 4.9e-20 101.7 121 48.8
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 3.2e-19 99.0 80 57.5
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 1.6e-18 96.7 63 68.3
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 8.1e-15 84.3 54 70.4
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 4.5e-13 78.6 95 46.3
Cre07.g357300 Chlamydomonas reinhardtii HOM05D007294 ORTHO05D009205 8.4e-12 74.3 99 36.4
SGA_v2.0_scaffold30G12388 Striga asiatica HOM05D007294 ORTHO05D403493 5.4e-11 71.6 46 76.1
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 1.0e-09 67.4 57 57.9
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 7.4e-08 61.2 44 61.4
Peaxi162Scf00395g00315 Petunia axillaris HOM05D007294 ORTHO05D009205 1.3e-07 60.5 88 42.0
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 4.8e-07 58.5 49 59.2


User provided reference genes

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