Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 2.1e-149 532.3 271 100.0
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 1.0e-103 380.6 266 74.4
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 6.9e-100 367.9 271 72.7
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 1.0e-95 354.0 264 67.4
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 3.0e-87 325.9 270 64.8
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 5.1e-87 325.1 267 63.3
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 3.3e-86 322.4 269 62.8
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 5.7e-86 321.6 267 65.5
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 1.7e-85 320.1 264 64.0
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 2.2e-85 319.7 266 63.5
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 2.2e-85 319.7 266 64.3
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 1.8e-84 316.6 274 62.8
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 1.8e-84 316.6 266 63.2
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 1.8e-84 316.6 266 63.2
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 1.0e-82 310.8 229 69.0
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 2.9e-82 309.3 232 68.5
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 2.5e-81 306.2 259 62.9
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 4.2e-81 305.4 268 61.6
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 1.6e-80 303.5 268 61.6
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 6.7e-79 298.1 232 66.8
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 1.7e-77 293.5 259 62.2
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 2.8e-77 292.7 261 62.8
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 6.3e-77 291.6 273 59.0
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 1.1e-76 290.8 255 63.1
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 3.1e-76 289.3 255 62.7
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 5.3e-76 288.5 255 61.2
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 4.5e-75 285.4 264 59.1
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 2.9e-74 282.7 264 57.2
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 1.8e-71 273.5 278 57.6
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 3.0e-71 272.7 259 58.3
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 1.2e-70 270.8 274 57.7
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 1.5e-70 270.4 262 56.1
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 1.5e-70 270.4 266 56.8
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 2.0e-70 270.0 260 58.1
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 4.4e-70 268.9 274 57.3
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 5.7e-70 268.5 230 61.3
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 2.2e-69 266.5 261 57.9
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 2.8e-69 266.2 272 56.2
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 2.8e-69 266.2 259 57.5
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 1.1e-68 264.2 258 58.1
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 1.1e-68 264.2 258 58.5
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 2.4e-68 263.1 267 55.1
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 3.1e-68 262.7 243 58.4
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 5.3e-68 261.9 275 54.2
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 3.5e-67 259.2 270 52.6
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 5.9e-67 258.5 275 55.3
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 7.7e-67 258.1 240 59.6
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 1.3e-66 257.3 357 47.9
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 2.9e-66 256.1 258 57.4
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 1.5e-65 253.8 219 60.7
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 1.9e-65 253.4 227 62.1
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 2.5e-65 253.1 257 55.3
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 5.5e-65 251.9 261 54.4
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 7.2e-65 251.5 259 54.4
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 1.2e-64 250.8 229 59.4
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 2.1e-64 250.0 290 50.0
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 4.7e-64 248.8 259 54.4
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.3e-63 246.5 259 53.7
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 3.0e-63 246.1 259 53.7
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 5.2e-63 245.4 273 53.5
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 2.6e-62 243.0 282 52.1
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 5.7e-62 241.9 287 50.5
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 7.5e-62 241.5 272 51.8
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 1.3e-61 240.7 259 54.8
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 6.3e-61 238.4 261 52.1
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 6.3e-61 238.4 254 53.1
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 6.3e-61 238.4 263 53.6
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 1.4e-60 237.3 258 55.8
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 2.4e-60 236.5 263 52.9
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 2.4e-60 236.5 263 52.9
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 2.4e-60 236.5 255 53.3
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 2.4e-60 236.5 258 55.8
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 2.4e-60 236.5 250 55.2
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 3.1e-60 236.1 260 56.2
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 4.1e-60 235.7 211 59.7
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 4.1e-60 235.7 189 66.1
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 9.1e-60 234.6 212 60.4
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 1.2e-59 234.2 215 60.5
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 2.7e-59 233.0 232 56.5
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 4.5e-59 232.3 214 58.4
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.3e-58 230.7 260 52.7
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 4.2e-57 225.7 250 54.4
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 5.5e-57 225.3 221 57.5
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 1.6e-56 223.8 259 51.7
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.4e-55 220.7 199 62.8
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 5.7e-54 215.3 255 48.6
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 1.7e-50 203.8 203 55.7
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 6.6e-50 201.8 198 59.6
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 3.6e-48 196.1 256 48.0
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 1.8e-47 193.7 118 83.9
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 1.5e-46 190.7 229 49.8
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 4.4e-46 189.1 257 46.7
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 5.8e-46 188.7 206 53.4
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 1.3e-45 187.6 272 46.3
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 1.3e-45 187.6 272 46.3
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 4.9e-45 185.7 256 48.0
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 6.4e-45 185.3 256 48.0
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 1.4e-44 184.1 268 44.0
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 3.2e-44 183.0 268 44.0
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 5.4e-44 182.2 221 48.9
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 7.0e-44 181.8 286 42.0
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 7.0e-44 181.8 278 43.9
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 2.7e-43 179.9 210 50.5
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 2.7e-43 179.9 277 41.9
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 3.5e-43 179.5 286 41.6
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 6.6e-42 175.3 241 46.5
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 4.3e-41 172.6 172 54.1
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 9.5e-41 171.4 269 43.9
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 1.6e-40 170.6 275 42.9
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 1.8e-39 167.2 255 43.9
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 1.3e-37 161.0 204 50.0
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 2.7e-35 153.3 227 45.8
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 2.3e-34 150.2 99 77.8
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 1.3e-29 134.4 104 67.3
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 4.6e-27 125.9 177 44.6
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 2.3e-26 123.6 168 42.9
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 5.6e-25 119.0 87 73.6
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 6.2e-24 115.5 73 82.2
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 5.2e-23 112.5 128 48.4
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 6.8e-23 112.1 185 40.5
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 2.0e-22 110.5 149 47.7
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 3.4e-22 109.8 237 32.1
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 4.2e-20 102.8 115 47.0
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 1.6e-19 100.9 124 45.2
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 3.0e-18 96.7 75 64.0
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 5.6e-17 92.4 210 32.9
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 1.4e-15 87.8 48 91.7
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 2.4e-15 87.0 54 81.5
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 5.3e-15 85.9 62 66.1
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 7.3e-09 65.5 67 49.3
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 4.8e-08 62.8 145 35.9
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-07 60.5 94 36.2


User provided reference genes

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