Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 1.5e-92 342.8 170 100.0
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 4.1e-42 175.3 157 60.5
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 2.7e-41 172.6 153 55.6
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 3.0e-40 169.1 157 59.2
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 2.3e-37 159.5 161 53.4
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 6.8e-37 157.9 142 57.0
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 3.4e-36 155.6 146 53.4
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 7.5e-36 154.5 149 51.0
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 9.8e-36 154.1 141 56.0
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 1.7e-35 153.3 166 48.2
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 2.2e-35 152.9 155 50.3
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 3.7e-35 152.1 157 54.1
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 6.4e-35 151.4 153 52.3
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 8.3e-35 151.0 136 56.6
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 1.9e-34 149.8 141 55.3
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 3.2e-34 149.1 144 54.9
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 3.2e-34 149.1 153 49.0
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 7.1e-34 147.9 158 48.7
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 1.2e-33 147.1 159 47.8
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 1.6e-33 146.7 151 47.7
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 1.6e-33 146.7 142 53.5
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 1.6e-33 146.7 142 53.5
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 1.6e-33 146.7 155 49.7
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 2.1e-33 146.4 157 47.1
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 2.7e-33 146.0 149 48.3
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 2.7e-33 146.0 152 47.4
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 2.7e-33 146.0 149 48.3
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 2.7e-33 146.0 142 53.5
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 3.5e-33 145.6 149 49.7
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 3.5e-33 145.6 151 49.0
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 3.5e-33 145.6 149 47.7
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 3.5e-33 145.6 145 51.7
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 3.5e-33 145.6 150 52.0
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 4.6e-33 145.2 152 47.4
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 6.0e-33 144.8 150 49.3
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 6.0e-33 144.8 148 49.3
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 6.0e-33 144.8 153 47.1
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 6.0e-33 144.8 153 47.7
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 6.0e-33 144.8 132 55.3
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 1.0e-32 144.1 148 49.3
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 1.3e-32 143.7 147 51.7
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 1.3e-32 143.7 141 53.2
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 1.7e-32 143.3 149 47.7
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 1.7e-32 143.3 153 47.7
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 1.7e-32 143.3 132 54.5
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 2.3e-32 142.9 149 47.7
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 2.3e-32 142.9 157 46.5
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 2.3e-32 142.9 150 48.7
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 2.3e-32 142.9 149 47.0
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 3.9e-32 142.1 149 49.0
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 3.9e-32 142.1 148 46.6
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 6.6e-32 141.4 149 47.0
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 1.1e-31 140.6 151 46.4
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 1.1e-31 140.6 155 47.1
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 1.1e-31 140.6 148 50.0
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 1.5e-31 140.2 149 47.0
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.5e-31 140.2 155 45.8
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 1.5e-31 140.2 142 51.4
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 1.9e-31 139.8 149 46.3
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 2.5e-31 139.4 152 46.1
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 2.5e-31 139.4 164 43.3
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 3.3e-31 139.0 152 46.7
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 3.3e-31 139.0 148 47.3
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 4.3e-31 138.7 155 44.5
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 4.3e-31 138.7 164 43.3
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 7.3e-31 137.9 157 50.3
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 9.5e-31 137.5 158 48.7
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 9.5e-31 137.5 147 47.6
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 9.5e-31 137.5 158 45.6
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 9.5e-31 137.5 167 44.9
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 1.6e-30 136.7 138 52.9
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 1.6e-30 136.7 151 47.0
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 2.1e-30 136.3 151 45.0
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 3.6e-30 135.6 141 50.4
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 4.7e-30 135.2 137 48.2
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 8.1e-30 134.4 145 45.5
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 1.1e-29 134.0 161 46.0
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.1e-29 134.0 150 44.7
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 1.8e-29 133.3 148 48.0
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 2.3e-29 132.9 156 45.5
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 2.3e-29 132.9 144 44.4
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 4.0e-29 132.1 159 44.0
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 5.2e-29 131.7 157 44.6
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 5.2e-29 131.7 149 45.6
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 5.2e-29 131.7 149 48.3
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 8.9e-29 131.0 141 49.6
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 8.9e-29 131.0 161 43.5
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 1.2e-28 130.6 121 56.2
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 1.5e-28 130.2 147 46.3
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 2.0e-28 129.8 144 47.9
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 2.6e-28 129.4 150 44.0
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 9.9e-28 127.5 149 45.0
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 1.3e-27 127.1 141 44.7
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 4.9e-27 125.2 112 58.0
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 8.4e-27 124.4 142 44.4
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 1.1e-26 124.0 149 43.6
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.4e-26 123.6 148 44.6
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 1.9e-26 123.2 121 49.6
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 7.1e-26 121.3 146 43.2
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 7.1e-26 121.3 148 46.6
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 1.6e-25 120.2 140 45.7
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 2.7e-25 119.4 149 45.6
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 3.5e-25 119.0 144 46.5
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 6.0e-25 118.2 141 46.8
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 7.8e-25 117.9 127 44.9
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 1.0e-24 117.5 127 45.7
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 1.5e-23 113.6 165 40.6
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 1.9e-23 113.2 111 51.4
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.9e-23 113.2 106 49.1
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 7.3e-23 111.3 162 39.5
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 9.6e-23 110.9 167 39.5
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 2.1e-22 109.8 136 42.6
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 4.7e-22 108.6 134 44.0
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 1.8e-21 106.7 146 39.7
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 6.9e-21 104.8 148 40.5
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.9e-18 96.7 150 36.7
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 4.2e-18 95.5 175 36.6
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 2.7e-17 92.8 122 42.6
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 1.7e-16 90.1 145 40.0
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 3.0e-16 89.4 139 40.3
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.3e-14 84.0 74 55.4
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 8.1e-14 81.3 103 47.6
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 5.3e-13 78.6 77 46.8
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 9.0e-13 77.8 76 52.6
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 2.9e-11 72.8 140 32.9
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 1.4e-10 70.5 75 42.7
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 1.2e-09 67.4 72 48.6
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 2.7e-09 66.2 68 50.0
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 1.3e-08 63.9 93 37.6


User provided reference genes

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