Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11073 Striga asiatica HOM05D005686 ORTHO05D006798 2.7e-132 475.3 239 100.0
SGA_v2.0_scaffold21G09585 Striga asiatica HOM05D005686 ORTHO05D006798 1.2e-26 124.4 108 64.8
MSTRG.5975 Avicennia marina HOM05D005686 ORTHO05D006798 1.3e-17 94.4 109 48.6
Rhsim01G0102500 Rhododendron simsii HOM05D005686 ORTHO05D006798 8.4e-17 91.7 154 37.0
Oeu021239.2 Olea europaea HOM05D005686 ORTHO05D006798 3.2e-16 89.7 141 41.1
Nitab4.5_0000019g0070 Nicotiana tabacum HOM05D005686 ORTHO05D006798 4.6e-15 85.9 109 44.0
Nitab4.5_0004788g0010 Nicotiana tabacum HOM05D005686 ORTHO05D006798 4.6e-15 85.9 109 44.0
vmacro20730 Vaccinium macrocarpon HOM05D005686 ORTHO05D006798 6.0e-15 85.5 107 43.9
CAN.G357.2 Capsicum annuum HOM05D005686 ORTHO05D006798 7.9e-15 85.1 109 42.2
Dinv26497 Davidia involucrata HOM05D005686 ORTHO05D006798 7.9e-15 85.1 167 35.3
Migut.J00862 Erythranthe guttata HOM05D005686 ORTHO05D006798 7.9e-15 85.1 107 46.7
vmacro20894 Vaccinium macrocarpon HOM05D005686 ORTHO05D006798 1.0e-14 84.7 131 38.2
CSS0027001 Camellia sinensis var. sinensis HOM05D005686 ORTHO05D006798 1.8e-14 84.0 106 44.3
Hma1.2p1_0391F.1_g142870 Hydrangea macrophylla HOM05D005686 ORTHO05D006798 3.0e-14 83.2 107 43.0
CSS0031712 Camellia sinensis var. sinensis HOM05D005686 ORTHO05D006798 6.7e-14 82.0 106 44.3
MBI13_g33582_MAGBIO Magnolia biondii HOM05D005686 ORTHO05D006798 8.7e-14 81.6 109 42.2
Oeu000268.1 Olea europaea HOM05D005686 ORTHO05D006798 1.1e-13 81.3 107 42.1
GSVIVG01034255001 Vitis vinifera HOM05D005686 ORTHO05D006798 1.5e-13 80.9 107 42.1
Lsat_1_v5_gn_7_57081 Lactuca sativa HOM05D005686 ORTHO05D006798 1.9e-13 80.5 107 41.1
MD04G1000800 Malus domestica HOM05D005686 ORTHO05D006798 1.9e-13 80.5 107 42.1
Prupe.1G000800 Prunus persica HOM05D005686 ORTHO05D006798 2.5e-13 80.1 107 42.1
CiPaw.08G000400 Carya illinoinensis HOM05D005686 ORTHO05D006798 3.3e-13 79.7 107 42.1
DCAR_014582 Daucus carota HOM05D005686 ORTHO05D006798 3.3e-13 79.7 107 39.3
Cfa012874 Carpinus fangiana HOM05D005686 ORTHO05D006798 7.4e-13 78.6 107 41.1
FvH4_4g00120 Fragaria vesca HOM05D005686 ORTHO05D006798 7.4e-13 78.6 107 42.1
QL11p005743 Quercus lobata HOM05D005686 ORTHO05D006798 7.4e-13 78.6 107 42.1
Manes.18G145300 Manihot esculenta HOM05D005686 ORTHO05D006798 1.3e-12 77.8 107 41.1
Atru.chr7.1021 Acer truncatum HOM05D005686 ORTHO05D006798 1.6e-12 77.4 107 39.3
ECA240G1888 Erigeron canadensis HOM05D005686 ORTHO05D006798 1.6e-12 77.4 109 37.6
PSO063G6522 Papaver somniferum HOM05D005686 ORTHO05D006798 1.6e-12 77.4 106 37.7
PSO170G1777 Papaver somniferum HOM05D005686 ORTHO05D006798 1.6e-12 77.4 106 37.7
Thecc.09G202000 Theobroma cacao HOM05D005686 ORTHO05D006798 1.6e-12 77.4 107 40.2
CANSAT80G2136 Cannabis sativa HOM05D005686 ORTHO05D006798 2.2e-12 77.0 107 37.4
Cc06_g23520 Coffea canephora HOM05D005686 ORTHO05D006798 2.2e-12 77.0 107 41.1
TAR383G0056 Trochodendron aralioides HOM05D005686 ORTHO05D006798 2.2e-12 77.0 107 43.0
FAN17G2251 Fragaria x ananassa HOM05D005686 ORTHO05D006798 2.8e-12 76.6 107 41.1
FAN22G1914 Fragaria x ananassa HOM05D005686 ORTHO05D006798 2.8e-12 76.6 107 41.1
EL10Ac2g03596 Beta vulgaris HOM05D005686 ORTHO05D006798 4.8e-12 75.9 107 39.3
ClCG03G011610 Citrullus lanatus HOM05D005686 ORTHO05D006798 4.8e-12 75.9 107 40.2
Ciclev10009500m.g Citrus clementina HOM05D005686 ORTHO05D006798 4.8e-12 75.9 107 39.3
Oeu000956.1 Olea europaea HOM05D005686 ORTHO05D006798 6.3e-12 75.5 107 39.3
Hma1.2p1_0394F.1_g143240 Hydrangea macrophylla HOM05D005686 ORTHO05D006798 8.2e-12 75.1 107 42.1
Peaxi162Scf00322g00914 Petunia axillaris HOM05D005686 ORTHO05D006798 8.2e-12 75.1 109 39.4
PGR142G1985 Punica granatum HOM05D005686 ORTHO05D006798 8.2e-12 75.1 107 41.1
Eucgr.C02152 Eucalyptus grandis HOM05D005686 ORTHO05D006798 1.1e-11 74.7 107 40.2
Potri.006G080900 Populus trichocarpa HOM05D005686 ORTHO05D006798 1.1e-11 74.7 107 39.3
Sed0010250 Sechium edule HOM05D005686 ORTHO05D006798 1.1e-11 74.7 107 39.3
Aqoxy7G02566 Aquilegia oxysepala HOM05D005686 ORTHO05D006798 1.8e-11 73.9 107 38.3
Potri.018G151500 Populus trichocarpa HOM05D005686 ORTHO05D006798 1.8e-11 73.9 107 37.4
Sc23g0005700 Simmondsia chinensis HOM05D005686 ORTHO05D006798 1.8e-11 73.9 107 39.3
COL.COLO4_09003 Corchorus olitorius HOM05D005686 ORTHO05D006798 4.1e-11 72.8 107 38.3
unitig_699.g19254 Utricularia gibba HOM05D005686 ORTHO05D006798 4.1e-11 72.8 111 39.6
Glyma.01G001000 Glycine max HOM05D005686 ORTHO05D006798 5.3e-11 72.4 107 40.2
RcHm_v2.0_Chr4g0384721 Rosa chinensis HOM05D005686 ORTHO05D006798 5.3e-11 72.4 105 40.0
Cpa.g.sc46.112 Carica papaya HOM05D005686 ORTHO05D006798 6.9e-11 72.0 107 37.4
TWI32G0912 Tripterygium wilfordii HOM05D005686 ORTHO05D006798 6.9e-11 72.0 107 37.4
Glyma.08G359900 Glycine max HOM05D005686 ORTHO05D006798 1.2e-10 71.2 107 38.3
Os02g0139100 Oryza sativa ssp. japonica HOM05D005686 ORTHO05D006798 1.2e-10 71.2 107 36.4
HanXRQChr03g0066651 Helianthus annuus HOM05D005686 ORTHO05D006798 1.5e-10 70.9 107 38.3
MELO3C010013.2 Cucumis melo HOM05D005686 ORTHO05D006798 3.4e-10 69.7 153 34.6
Lj2g0013423 Lotus japonicus HOM05D005686 ORTHO05D006798 3.4e-10 69.7 107 40.2
arahy.Tifrunner.gnm1.ann1.G6JDG7 Arachis hypogaea HOM05D005686 ORTHO05D006798 4.5e-10 69.3 102 43.1
Gorai.004G024000 Gossypium raimondii HOM05D005686 ORTHO05D006798 4.5e-10 69.3 108 39.8
Psat1g052000 Pisum sativum HOM05D005686 ORTHO05D006798 4.5e-10 69.3 107 39.3
arahy.Tifrunner.gnm1.ann1.1A52WD Arachis hypogaea HOM05D005686 ORTHO05D006798 5.9e-10 68.9 102 43.1
Zm00001eb232010 Zea mays HOM05D005686 ORTHO05D006798 5.9e-10 68.9 107 32.7
Medtr6g093220 Medicago truncatula HOM05D005686 ORTHO05D006798 7.7e-10 68.6 107 39.3
Gohir.D08G027100 Gossypium hirsutum HOM05D005686 ORTHO05D006798 1.0e-09 68.2 108 38.9
Duzib170G0214 Durio zibethinus HOM05D005686 ORTHO05D006798 1.3e-09 67.8 107 37.4
Gohir.A08G016700 Gossypium hirsutum HOM05D005686 ORTHO05D006798 1.3e-09 67.8 108 38.9
Os06g0703800 Oryza sativa ssp. japonica HOM05D005686 ORTHO05D006798 2.2e-09 67.0 107 34.6
ATR0626G256 Amborella trichopoda HOM05D005686 ORTHO05D006798 2.9e-09 66.6 107 35.5
Ca_25642_v3 Cicer arietinum L. HOM05D005686 ORTHO05D006798 3.8e-09 66.2 107 37.4
MBI13_g08742_MAGBIO Magnolia biondii HOM05D005686 ORTHO05D006798 6.5e-09 65.5 125 36.0
C03p14560 Brassica napus HOM05D005686 ORTHO05D006798 1.1e-08 64.7 107 36.4
CDE07G1048 Ceratophyllum demersum HOM05D005686 ORTHO05D006798 1.1e-08 64.7 107 38.3
BolC3t13898H Brassica oleracea HOM05D005686 ORTHO05D006798 1.4e-08 64.3 107 36.4
AUR62020755 Chenopodium quinoa HOM05D005686 ORTHO05D006798 1.4e-08 64.3 107 32.7
AUR62027958 Chenopodium quinoa HOM05D005686 ORTHO05D006798 1.4e-08 64.3 107 32.7
CDE04G0009 Ceratophyllum demersum HOM05D005686 ORTHO05D006798 2.5e-08 63.5 107 37.4
BcaB01g04553 Brassica carinata HOM05D005686 ORTHO05D006798 3.2e-08 63.2 107 34.6
BcaB08g36164 Brassica carinata HOM05D005686 ORTHO05D006798 3.2e-08 63.2 107 33.6
CARHR271940 Cardamine hirsuta HOM05D005686 ORTHO05D006798 3.2e-08 63.2 107 34.6
HanXRQChr09g0245301 Helianthus annuus HOM05D005686 ORTHO05D006798 3.2e-08 63.2 107 36.4
AL8G34220 Arabidopsis lyrata HOM05D005686 ORTHO05D006798 4.2e-08 62.8 107 34.6
BraA03t10552Z Brassica rapa HOM05D005686 ORTHO05D006798 4.2e-08 62.8 107 33.6
Oeu018307.1 Olea europaea HOM05D005686 ORTHO05D006798 4.2e-08 62.8 154 31.8
BcaC04g19906 Brassica carinata HOM05D005686 ORTHO05D006798 5.5e-08 62.4 107 33.6
Sp6g19800 Schrenkiella parvula HOM05D005686 ORTHO05D006798 5.5e-08 62.4 107 35.5
A10p16070 Brassica napus HOM05D005686 ORTHO05D006798 7.2e-08 62.0 107 33.6
BraA10t43622Z Brassica rapa HOM05D005686 ORTHO05D006798 7.2e-08 62.0 107 33.6
Thhalv10014732m.g Eutrema salsugineum HOM05D005686 ORTHO05D006798 1.2e-07 61.2 107 33.6
AT5G58110 Arabidopsis thaliana HOM05D005686 ORTHO05D006798 2.7e-07 60.1 107 33.6
BcaB01g04476 Brassica carinata HOM05D005686 ORTHO05D006798 2.7e-07 60.1 107 33.6
A03p12400 Brassica napus HOM05D005686 ORTHO05D006798 3.6e-07 59.7 107 33.6
Carub.0008s1867 Capsella rubella HOM05D005686 ORTHO05D006798 4.6e-07 59.3 107 33.6
C09p50020 Brassica napus HOM05D005686 ORTHO05D006798 6.1e-07 58.9 107 32.7
BolC9t57855H Brassica oleracea HOM05D005686 ORTHO05D006798 6.1e-07 58.9 107 32.7
HPP92_017040 Vanilla planifolia HOM05D005686 ORTHO05D006798 6.1e-07 58.9 108 31.5
Lalb_Chr24g0401731 Lupinus albus HOM05D005686 ORTHO05D006798 7.9e-07 58.5 107 33.6
SEGI_10084 Sequoiadendron giganteum HOM05D005686 ORTHO05D006798 7.9e-07 58.5 107 35.5
THA.LOC104811843 Tarenaya hassleriana HOM05D005686 ORTHO05D006798 7.9e-07 58.5 106 34.0
Aa31LG3G13950 Aethionema arabicum HOM05D005244 ORTHO05D006539 2.3e-06 57.0 106 31.1


User provided reference genes

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