Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11053 Striga asiatica HOM05D000125 ORTHO05D000120 2.5e-297 1024.6 488 100.0
SGA_v2.0_scaffold25G11039 Striga asiatica HOM05D000125 ORTHO05D000120 6.5e-141 505.0 502 55.4
SGA_v2.0_scaffold25G11043 Striga asiatica HOM05D000125 ORTHO05D000120 7.0e-135 485.0 548 50.5
SGA_v2.0_scaffold550G52868 Striga asiatica HOM05D000125 ORTHO05D000120 2.4e-58 230.7 479 35.5
SalBow8G3592 Salvia bowleyana HOM05D000125 ORTHO05D000120 1.4e-39 168.3 510 29.8
SalBow8G1041 Salvia bowleyana HOM05D000125 ORTHO05D000120 4.4e-36 156.8 507 30.4
SalBow6G4272 Salvia bowleyana HOM05D000125 ORTHO05D000120 2.7e-30 137.5 502 28.7
SalBow6G6574 Salvia bowleyana HOM05D000125 ORTHO05D000120 6.1e-30 136.3 495 27.3
SalBow8G5208 Salvia bowleyana HOM05D000125 ORTHO05D000120 1.4e-29 135.2 505 28.5
SGA_v2.0_scaffold25G11205 Striga asiatica HOM05D000125 ORTHO05D000120 1.8e-29 134.8 543 27.8
SalBow8G2251 Salvia bowleyana HOM05D000125 ORTHO05D000120 1.2e-28 132.1 505 28.1
SGA_v2.0_scaffold158G37506 Striga asiatica HOM05D000125 ORTHO05D000120 1.3e-27 128.6 574 28.6
SGA_v2.0_scaffold25G11203 Striga asiatica HOM05D000125 ORTHO05D000120 6.5e-24 116.3 520 28.1
SalBow8G1235 Salvia bowleyana HOM05D000125 ORTHO05D000120 2.1e-22 111.3 198 37.4
SalBow8G2214 Salvia bowleyana HOM05D000125 ORTHO05D000120 3.4e-20 104.0 201 37.3
MSTRG.21292 Avicennia marina HOM05D000125 ORTHO05D000120 1.6e-17 95.1 199 33.2
Lsat_1_v5_gn_8_81081 Lactuca sativa HOM05D000125 ORTHO05D000120 2.5e-15 87.8 211 30.8
SGA_v2.0_scaffold9G04972 Striga asiatica HOM05D000125 ORTHO05D000120 3.2e-15 87.4 150 35.3
Lsat_1_v5_gn_2_22961 Lactuca sativa HOM05D000125 ORTHO05D000120 1.0e-13 82.4 220 29.5
HanXRQChr12g0358611 Helianthus annuus HOM05D000125 ORTHO05D000120 4.0e-13 80.5 195 27.7
Lsat_1_v5_gn_8_80160 Lactuca sativa HOM05D000125 ORTHO05D000120 8.8e-13 79.3 175 32.6
HanXRQChr05g0132781 Helianthus annuus HOM05D000125 ORTHO05D000120 5.7e-12 76.6 247 31.2
Dinv14263 Davidia involucrata HOM05D000125 ORTHO05D000120 7.5e-12 76.3 195 31.8
HanXRQChr13g0409971 Helianthus annuus HOM05D000125 ORTHO05D000120 7.5e-12 76.3 248 27.4
ECA248G3898 Erigeron canadensis HOM05D000125 ORTHO05D000120 1.3e-11 75.5 208 28.8
HanXRQChr05g0144911 Helianthus annuus HOM05D000125 ORTHO05D000120 1.3e-11 75.5 173 28.9
HanXRQChr12g0356751 Helianthus annuus HOM05D000125 ORTHO05D000120 2.2e-11 74.7 201 29.9
HanXRQChr16g0499051 Helianthus annuus HOM05D000125 ORTHO05D000120 2.2e-11 74.7 208 30.8
Lsat_1_v5_gn_8_80280 Lactuca sativa HOM05D000125 ORTHO05D000120 2.8e-11 74.3 173 30.6
HanXRQChr16g0499071 Helianthus annuus HOM05D000125 ORTHO05D000120 3.7e-11 73.9 209 28.2
Lsat_1_v5_gn_8_80460 Lactuca sativa HOM05D000125 ORTHO05D000120 8.3e-11 72.8 216 29.2
HanXRQChr09g0261071 Helianthus annuus HOM05D000125 ORTHO05D000120 1.4e-10 72.0 201 30.8
HanXRQChr16g0499201 Helianthus annuus HOM05D000125 ORTHO05D000120 4.1e-10 70.5 210 27.6
HanXRQChr16g0499231 Helianthus annuus HOM05D000125 ORTHO05D000120 4.1e-10 70.5 206 28.6
Dinv12476 Davidia involucrata HOM05D000125 ORTHO05D000120 5.4e-10 70.1 190 30.0
HanXRQChr04g0096141 Helianthus annuus HOM05D000125 ORTHO05D000120 5.4e-10 70.1 255 28.2
HanXRQChr09g0261121 Helianthus annuus HOM05D000125 ORTHO05D000120 5.4e-10 70.1 201 29.9
HanXRQChr02g0054611 Helianthus annuus HOM05D000125 ORTHO05D000120 7.0e-10 69.7 172 33.1
HanXRQChr09g0261061 Helianthus annuus HOM05D000125 ORTHO05D000120 7.0e-10 69.7 201 30.8
HanXRQChr02g0054421 Helianthus annuus HOM05D000125 ORTHO05D000120 1.2e-09 68.9 171 32.2
HanXRQChr02g0054591 Helianthus annuus HOM05D000125 ORTHO05D000120 1.2e-09 68.9 250 29.2
Lsat_1_v5_gn_8_80121 Lactuca sativa HOM05D000125 ORTHO05D000120 1.2e-09 68.9 209 29.7
HanXRQChr12g0356731 Helianthus annuus HOM05D000125 ORTHO05D000120 1.6e-09 68.6 203 31.5
HanXRQChr16g0499091 Helianthus annuus HOM05D000125 ORTHO05D000120 1.6e-09 68.6 206 28.6
HanXRQChr02g0054741 Helianthus annuus HOM05D000125 ORTHO05D000120 2.0e-09 68.2 246 29.7
HanXRQChr13g0410801 Helianthus annuus HOM05D000125 ORTHO05D000120 2.0e-09 68.2 174 33.3
HanXRQChr16g0499181 Helianthus annuus HOM05D000125 ORTHO05D000120 2.0e-09 68.2 206 28.2
HanXRQChr09g0261051 Helianthus annuus HOM05D000125 ORTHO05D000120 5.9e-09 66.6 176 31.2
HanXRQChr14g0430601 Helianthus annuus HOM05D000125 ORTHO05D000120 1.0e-08 65.9 195 28.2
QL03p007034 Quercus lobata HOM05D000125 ORTHO05D000120 1.3e-08 65.5 177 29.9
HanXRQChr09g0261141 Helianthus annuus HOM05D000125 ORTHO05D000120 1.7e-08 65.1 201 29.4
HanXRQChr16g0498981 Helianthus annuus HOM05D000125 ORTHO05D000120 1.7e-08 65.1 210 27.1
HanXRQChr17g0551181 Helianthus annuus HOM05D000125 ORTHO05D000120 1.7e-08 65.1 316 27.2
Lj1C273T1 Lonicera japonica HOM05D000125 ORTHO05D000120 1.7e-08 65.1 191 29.3
HanXRQChr16g0499041 Helianthus annuus HOM05D000125 ORTHO05D000120 2.3e-08 64.7 206 27.7
HanXRQChr16g0499011 Helianthus annuus HOM05D000125 ORTHO05D000120 2.9e-08 64.3 209 25.8
ECA240G4627 Erigeron canadensis HOM05D000125 ORTHO05D000120 3.8e-08 63.9 172 29.7
HanXRQChr08g0209771 Helianthus annuus HOM05D000125 ORTHO05D000120 3.8e-08 63.9 315 26.3
Lj1A250T9 Lonicera japonica HOM05D000125 ORTHO05D000120 8.6e-08 62.8 192 30.7
Lj1g0005454 Lotus japonicus HOM05D000125 ORTHO05D000120 1.1e-07 62.4 186 29.0
HanXRQChr13g0410771 Helianthus annuus HOM05D000125 ORTHO05D000120 1.5e-07 62.0 174 30.5
HanXRQChr16g0499101 Helianthus annuus HOM05D000125 ORTHO05D000120 1.9e-07 61.6 205 26.3
Dinv39597 Davidia involucrata HOM05D000125 ORTHO05D000120 4.3e-07 60.5 188 26.6
HanXRQChr02g0054671 Helianthus annuus HOM05D000125 ORTHO05D000120 4.3e-07 60.5 173 31.8
ECA234G4526 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.3e-07 59.7 199 29.1
HanXRQChr14g0430571 Helianthus annuus HOM05D000125 ORTHO05D000120 7.3e-07 59.7 201 27.9
HanXRQChr16g0498831 Helianthus annuus HOM05D000125 ORTHO05D000120 7.3e-07 59.7 324 25.0
HanXRQChr08g0209921 Helianthus annuus HOM05D000125 ORTHO05D000120 9.5e-07 59.3 313 26.5
HanXRQChr12g0355681 Helianthus annuus HOM05D000125 ORTHO05D000120 9.5e-07 59.3 159 30.2
ECA247G0507 Erigeron canadensis HOM05D000125 ORTHO05D000120 1.2e-06 58.9 204 27.5
HanXRQChr14g0430591 Helianthus annuus HOM05D000125 ORTHO05D000120 1.2e-06 58.9 197 28.4
Haze_09963 Corylus avellana HOM05D000125 ORTHO05D000120 1.6e-06 58.5 164 28.0
HanXRQChr12g0358871 Helianthus annuus HOM05D000125 ORTHO05D000120 1.6e-06 58.5 195 28.2
Lsat_1_v5_gn_9_32180 Lactuca sativa HOM05D000125 ORTHO05D000120 2.1e-06 58.2 243 25.5
HanXRQChr08g0209941 Helianthus annuus HOM05D000125 ORTHO05D000120 2.8e-06 57.8 379 25.3
Thhalv10000551m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 3.6e-06 57.4 204 30.9
CSS0022579 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000120 4.7e-06 57.0 192 28.6
MSTRG.21071 Avicennia marina HOM05D000125 ORTHO05D000120 6.1e-06 56.6 68 47.1
Lj1C251T1 Lonicera japonica HOM05D000125 ORTHO05D000120 6.1e-06 56.6 191 28.3
Gohir.A02G014100 Gossypium hirsutum HOM05D000125 ORTHO05D000120 8.0e-06 56.2 183 31.7


User provided reference genes

Program Settings