Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11031 Striga asiatica HOM05D005558 ORTHO05D006832 2.8e-117 425.2 210 100.0
SGA_v2.0_scaffold19G08925 Striga asiatica HOM05D005558 ORTHO05D006832 2.1e-64 249.6 140 85.7
Migut.N03003 Erythranthe guttata HOM05D005558 ORTHO05D006832 1.1e-60 237.3 180 66.1
MSTRG.24533 Avicennia marina HOM05D005558 ORTHO05D006832 1.7e-58 229.9 201 60.7
Rhsim06G0000500 Rhododendron simsii HOM05D005558 ORTHO05D006832 1.1e-57 227.3 145 71.7
Nn6g31548 Nelumbo nucifera HOM05D005558 ORTHO05D006832 3.1e-55 219.2 128 79.7
TPR.G20977 Trifolium pratense HOM05D005558 ORTHO05D006832 6.9e-55 218.0 148 70.3
PSO170G6225 Papaver somniferum HOM05D005558 ORTHO05D006832 2.0e-54 216.5 136 74.3
BcaB07g32099 Brassica carinata HOM05D005558 ORTHO05D006832 3.4e-54 215.7 128 77.3
BcaC05g26014 Brassica carinata HOM05D005558 ORTHO05D006832 3.4e-54 215.7 128 77.3
A06p17130 Brassica napus HOM05D005558 ORTHO05D006832 3.4e-54 215.7 128 77.3
BraA06t24816Z Brassica rapa HOM05D005558 ORTHO05D006832 3.4e-54 215.7 128 77.3
Lsat_1_v5_gn_2_2740 Lactuca sativa HOM05D005558 ORTHO05D006832 3.4e-54 215.7 134 73.1
PSO017G1036 Papaver somniferum HOM05D005558 ORTHO05D006832 3.4e-54 215.7 136 74.3
TAR381G1539 Trochodendron aralioides HOM05D005558 ORTHO05D006832 4.4e-54 215.3 136 72.8
GSVIVG01013466001 Vitis vinifera HOM05D005558 ORTHO05D006832 5.8e-54 214.9 128 76.6
CSS0024776 Camellia sinensis var. sinensis HOM05D005558 ORTHO05D006832 7.6e-54 214.5 145 70.3
Glyma.07G221200 Glycine max HOM05D005558 ORTHO05D006832 7.6e-54 214.5 130 77.7
THA.LOC104813721 Tarenaya hassleriana HOM05D005558 ORTHO05D006832 7.6e-54 214.5 142 71.8
Lj4g0004166 Lotus japonicus HOM05D005558 ORTHO05D006832 9.9e-54 214.2 130 76.9
Carub.0001s2052 Capsella rubella HOM05D005558 ORTHO05D006832 1.3e-53 213.8 128 75.8
Medtr4g084120 Medicago truncatula HOM05D005558 ORTHO05D006832 1.7e-53 213.4 149 69.1
Cc10_g00070 Coffea canephora HOM05D005558 ORTHO05D006832 2.2e-53 213.0 130 75.4
Hma1.2p1_0914F.1_g236230 Hydrangea macrophylla HOM05D005558 ORTHO05D006832 2.2e-53 213.0 146 69.9
CAN.G208.43 Capsicum annuum HOM05D005558 ORTHO05D006832 2.9e-53 212.6 136 72.1
RcHm_v2.0_Chr7g0217691 Rosa chinensis HOM05D005558 ORTHO05D006832 2.9e-53 212.6 128 75.8
Sp1g18730 Schrenkiella parvula HOM05D005558 ORTHO05D006832 2.9e-53 212.6 137 72.3
CiPaw.07G129900 Carya illinoinensis HOM05D005558 ORTHO05D006832 3.8e-53 212.2 156 65.4
Aqoxy5G00965 Aquilegia oxysepala HOM05D005558 ORTHO05D006832 4.9e-53 211.8 149 67.1
arahy.Tifrunner.gnm1.ann1.09GV4T Arachis hypogaea HOM05D005558 ORTHO05D006832 4.9e-53 211.8 129 76.7
arahy.Tifrunner.gnm1.ann1.H4MLSW Arachis hypogaea HOM05D005558 ORTHO05D006832 4.9e-53 211.8 129 76.7
HanXRQChr14g0427511 Helianthus annuus HOM05D005558 ORTHO05D006832 4.9e-53 211.8 149 67.1
Psat7g129880 Pisum sativum HOM05D005558 ORTHO05D006832 4.9e-53 211.8 148 67.6
Sabra02G0001000 Salix brachista HOM05D005558 ORTHO05D006832 4.9e-53 211.8 149 67.8
Actinidia15539 Actinidia chinensis HOM05D005558 ORTHO05D006832 6.4e-53 211.5 140 72.1
Cfa014170 Carpinus fangiana HOM05D005558 ORTHO05D006832 8.4e-53 211.1 183 60.1
Ca_18758_v3 Cicer arietinum L. HOM05D005558 ORTHO05D006832 8.4e-53 211.1 161 66.5
CsaV3_4G037850 Cucumis sativus L. HOM05D005558 ORTHO05D006832 8.4e-53 211.1 146 70.5
Lalb_Chr05g0219661 Lupinus albus HOM05D005558 ORTHO05D006832 8.4e-53 211.1 130 74.6
Gohir.A05G177400 Gossypium hirsutum HOM05D005558 ORTHO05D006832 1.1e-52 210.7 146 72.6
Gorai.009G185800 Gossypium raimondii HOM05D005558 ORTHO05D006832 1.1e-52 210.7 146 72.6
QL02p016334 Quercus lobata HOM05D005558 ORTHO05D006832 1.1e-52 210.7 154 65.6
EL10Ac7g17248 Beta vulgaris HOM05D005558 ORTHO05D006832 1.9e-52 209.9 137 71.5
C08p20580 Brassica napus HOM05D005558 ORTHO05D006832 1.9e-52 209.9 131 73.3
CiPaw.08G079200 Carya illinoinensis HOM05D005558 ORTHO05D006832 1.9e-52 209.9 153 66.7
ClCG11G019260 Citrullus lanatus HOM05D005558 ORTHO05D006832 1.9e-52 209.9 173 62.4
AL1G34110 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 2.4e-52 209.5 128 75.0
Ciclev10002303m.g Citrus clementina HOM05D005558 ORTHO05D006832 2.4e-52 209.5 136 72.8
Hund05339 Selenicereus undatus HOM05D005558 ORTHO05D006832 2.4e-52 209.5 154 65.6
arahy.Tifrunner.gnm1.ann1.8D2970 Arachis hypogaea HOM05D005558 ORTHO05D006832 3.2e-52 209.1 152 66.4
arahy.Tifrunner.gnm1.ann1.GVHP98 Arachis hypogaea HOM05D005558 ORTHO05D006832 3.2e-52 209.1 152 66.4
BcaB03g12837 Brassica carinata HOM05D005558 ORTHO05D006832 3.2e-52 209.1 128 75.0
CARHR021510 Cardamine hirsuta HOM05D005558 ORTHO05D006832 3.2e-52 209.1 128 75.8
Nitab4.5_0003423g0040 Nicotiana tabacum HOM05D005558 ORTHO05D006832 3.2e-52 209.1 142 70.4
Potri.002G001500 Populus trichocarpa HOM05D005558 ORTHO05D006832 3.2e-52 209.1 149 67.1
Gohir.D05G180800 Gossypium hirsutum HOM05D005558 ORTHO05D006832 4.2e-52 208.8 146 71.9
Solyc12g095770.2 Solanum lycopersicum HOM05D005558 ORTHO05D006832 4.2e-52 208.8 136 70.6
Zm00001eb234660 Zea mays HOM05D005558 ORTHO05D006832 4.2e-52 208.8 127 76.4
AUR62041000 Chenopodium quinoa HOM05D005558 ORTHO05D006832 5.4e-52 208.4 128 73.4
Manes.18G000600 Manihot esculenta HOM05D005558 ORTHO05D006832 5.4e-52 208.4 162 64.2
Phvul.002G097800 Phaseolus vulgaris HOM05D005558 ORTHO05D006832 5.4e-52 208.4 130 75.4
Sopen12g031670 Solanum pennellii HOM05D005558 ORTHO05D006832 5.4e-52 208.4 136 70.6
PGSC0003DMG400029397 Solanum tuberosum HOM05D005558 ORTHO05D006832 5.4e-52 208.4 128 74.2
Ah.08g212310 Amaranthus hybridus HOM05D005558 ORTHO05D006832 7.1e-52 208.0 148 66.9
FAN04G1408 Fragaria x ananassa HOM05D005558 ORTHO05D006832 7.1e-52 208.0 150 68.0
Sc17g0004140 Simmondsia chinensis HOM05D005558 ORTHO05D006832 7.1e-52 208.0 128 75.0
BcaC07g39074 Brassica carinata HOM05D005558 ORTHO05D006832 9.3e-52 207.6 142 69.0
BolC8t49687H Brassica oleracea HOM05D005558 ORTHO05D006832 9.3e-52 207.6 128 74.2
Os02g0187500 Oryza sativa ssp. japonica HOM05D005558 ORTHO05D006832 9.3e-52 207.6 127 75.6
Atru.chr13.17 Acer truncatum HOM05D005558 ORTHO05D006832 1.2e-51 207.2 153 66.0
A08p29100 Brassica napus HOM05D005558 ORTHO05D006832 1.2e-51 207.2 128 74.2
BraA08t34846Z Brassica rapa HOM05D005558 ORTHO05D006832 1.2e-51 207.2 128 74.2
FvH4_5g26780 Fragaria vesca HOM05D005558 ORTHO05D006832 1.2e-51 207.2 167 62.9
FAN18G4437 Fragaria x ananassa HOM05D005558 ORTHO05D006832 1.2e-51 207.2 167 62.9
Prupe.5G000800 Prunus persica HOM05D005558 ORTHO05D006832 1.2e-51 207.2 128 74.2
ATR0605G185 Amborella trichopoda HOM05D005558 ORTHO05D006832 2.1e-51 206.5 150 65.3
COL.COLO4_12262 Corchorus olitorius HOM05D005558 ORTHO05D006832 2.1e-51 206.5 148 69.6
MD07G1016000 Malus domestica HOM05D005558 ORTHO05D006832 2.1e-51 206.5 128 74.2
Thecc.08G097300 Theobroma cacao HOM05D005558 ORTHO05D006832 2.1e-51 206.5 142 71.8
Sed0017561 Sechium edule HOM05D005558 ORTHO05D006832 2.7e-51 206.1 153 65.4
FAN08G1374 Fragaria x ananassa HOM05D005558 ORTHO05D006832 3.5e-51 205.7 150 67.3
Thhalv10008709m.g Eutrema salsugineum HOM05D005558 ORTHO05D006832 6.0e-51 204.9 129 74.4
AT1G21065 Arabidopsis thaliana HOM05D005558 ORTHO05D006832 7.8e-51 204.5 127 74.0
Peaxi162Scf00064g01430 Petunia axillaris HOM05D005558 ORTHO05D006832 1.0e-50 204.1 151 64.2
PGR083G0867 Punica granatum HOM05D005558 ORTHO05D006832 1.0e-50 204.1 142 70.4
TWI12G1391 Tripterygium wilfordii HOM05D005558 ORTHO05D006832 1.0e-50 204.1 156 64.7
Duzib116G0928 Durio zibethinus HOM05D005558 ORTHO05D006832 1.7e-50 203.4 146 69.2
CANSAT25G0089 Cannabis sativa HOM05D005558 ORTHO05D006832 3.0e-50 202.6 145 67.6
MD06G1057400 Malus domestica HOM05D005558 ORTHO05D006832 3.0e-50 202.6 149 67.8
SEGI_40156 Sequoiadendron giganteum HOM05D005558 ORTHO05D006832 8.7e-50 201.1 126 73.0
HPP92_021698 Vanilla planifolia HOM05D005558 ORTHO05D006832 1.9e-49 199.9 127 71.7
HPP92_017798 Vanilla planifolia HOM05D005558 ORTHO05D006832 3.3e-49 199.1 177 62.1
Zm00001eb387340 Zea mays HOM05D005558 ORTHO05D006832 2.1e-48 196.4 143 65.0
Eucgr.F01955 Eucalyptus grandis HOM05D005558 ORTHO05D006832 6.2e-48 194.9 217 50.2
Lalb_Chr15g0083971 Lupinus albus HOM05D005558 ORTHO05D006832 8.1e-48 194.5 153 61.4
Pp3c1_31360 Physcomitrium patens HOM05D005558 ORTHO05D006832 4.0e-47 192.2 128 68.8
Glyma.15G161100 Glycine max HOM05D005558 ORTHO05D006832 6.9e-47 191.4 128 68.0
SMO259G0018 Selaginella moellendorffii HOM05D005558 ORTHO05D006832 9.0e-47 191.0 127 67.7
Mapoly0002s0034 Marchantia polymorpha HOM05D005558 ORTHO05D006832 1.7e-45 186.8 127 68.5
VMungo0251G0776 Vigna mungo HOM05D005558 ORTHO05D006832 1.7e-45 186.8 116 77.6
ECA238G0376 Erigeron canadensis HOM05D005558 ORTHO05D006832 3.8e-45 185.7 99 82.8
Dinv05517 Davidia involucrata HOM05D005558 ORTHO05D006832 8.4e-45 184.5 134 67.9
Nitab4.5_0001309g0160 Nicotiana tabacum HOM05D005558 ORTHO05D006832 1.4e-44 183.7 97 83.5
Phvul.009G240200 Phaseolus vulgaris HOM05D005558 ORTHO05D006832 2.3e-42 176.4 115 72.2
MELO3C017079.2 Cucumis melo HOM05D005558 ORTHO05D006832 3.0e-42 176.0 95 81.1
BolC5t30678H Brassica oleracea HOM05D000370 ORTHO05D006832 4.8e-40 168.7 125 66.4
Cre17.g739300 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D006832 1.1e-39 167.5 127 63.0
Lj4C814G4 Lonicera japonica HOM05D005558 ORTHO05D006832 1.8e-39 166.8 137 58.4
Prupe.5G000700 Prunus persica HOM05D005558 ORTHO05D006832 2.4e-39 166.4 96 78.1
Oeu000735.2 Olea europaea HOM05D005558 ORTHO05D006832 1.6e-35 153.7 109 68.8
vmacro21735 Vaccinium macrocarpon HOM05D005558 ORTHO05D006832 7.9e-35 151.4 127 61.4
TAR376G0283 Trochodendron aralioides HOM05D005558 ORTHO05D006832 1.3e-34 150.6 96 74.0
Os06g0638200 Oryza sativa ssp. japonica HOM05D005558 ORTHO05D006832 3.9e-34 149.1 75 86.7
SMO203G0115 Selaginella moellendorffii HOM05D005558 ORTHO05D006832 6.9e-31 138.3 144 48.6
Pp3c2_25680 Physcomitrium patens HOM05D005558 ORTHO05D006832 1.4e-28 130.6 157 45.9
Cre01.g043100 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D006832 3.2e-28 129.4 153 47.1
Mapoly0065s0101 Marchantia polymorpha HOM05D005558 ORTHO05D006832 3.2e-28 129.4 152 50.0
SEGI_39286 Sequoiadendron giganteum HOM05D005558 ORTHO05D006832 5.5e-28 128.6 127 49.6
CBR_g570 Chara braunii HOM05D005558 ORTHO05D006832 1.9e-25 120.2 94 61.7
Peaxi162Scf00064g01422 Petunia axillaris HOM05D005558 ORTHO05D006832 3.3e-25 119.4 92 64.1
Cfa023908 Carpinus fangiana HOM05D005558 ORTHO05D006832 2.2e-24 116.7 137 41.6
AL8G17720 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 6.3e-24 115.2 81 70.4
AL5G16180 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 5.3e-23 112.1 79 69.6
SalBow6G6347 Salvia bowleyana HOM05D005558 ORTHO05D006832 1.9e-20 103.6 203 36.5
Haze_22894 Corylus avellana HOM05D005558 ORTHO05D006832 1.8e-18 97.1 153 36.6
CDE04G3086 Ceratophyllum demersum HOM05D000433 ORTHO05D000443 3.9e-18 95.9 48 83.3
HPP92_021704 Vanilla planifolia HOM05D005558 ORTHO05D006832 6.7e-18 95.1 49 77.6
MCO09G054 Micromonas commoda HOM05D005558 ORTHO05D006832 5.7e-17 92.0 125 42.4
AagrBONN_evm.TU.Sc2ySwM_344.2923 Anthoceros agrestis HOM05D005558 ORTHO05D006832 1.9e-12 77.0 91 46.2
C05p19780 Brassica napus HOM05D005558 ORTHO05D006832 2.3e-10 70.1 35 80.0
PRCOL_00001425 Prasinoderma coloniale HOM05D005558 ORTHO05D006832 2.6e-09 66.6 128 30.5
Cpa.g.sc36.93 Carica papaya HOM05D005558 ORTHO05D006832 7.4e-09 65.1 31 87.1
BcaC07g39073 Brassica carinata HOM05D005558 ORTHO05D006832 7.0e-07 58.5 29 79.3
Cre09.g396850 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D034498 2.6e-06 56.6 126 30.2


User provided reference genes

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