Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 1.8e-301 1038.5 538 100.0
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 9.4e-157 557.8 544 61.0
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 1.3e-68 265.0 553 41.0
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 1.4e-64 251.5 720 34.9
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 1.1e-51 208.8 639 32.9
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 3.0e-38 164.1 669 30.3
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 9.1e-35 152.5 405 32.8
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 1.2e-34 152.1 574 30.5
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 1.5e-34 151.8 572 30.6
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 4.5e-34 150.2 644 30.9
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 7.7e-34 149.4 611 30.0
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 2.9e-33 147.5 685 27.3
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 3.2e-32 144.1 672 28.6
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 9.4e-32 142.5 647 28.7
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 1.2e-31 142.1 703 27.3
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 3.6e-31 140.6 472 29.9
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 7.9e-31 139.4 469 30.1
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 1.4e-30 138.7 662 29.9
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 3.9e-30 137.1 660 28.2
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 5.1e-30 136.7 697 27.8
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 5.1e-30 136.7 702 27.8
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 2.0e-29 134.8 456 30.0
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 4.4e-29 133.7 680 28.1
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 4.4e-29 133.7 660 28.5
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 1.3e-28 132.1 685 28.6
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 1.7e-28 131.7 685 27.2
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 2.2e-28 131.3 573 27.6
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 3.7e-28 130.6 663 28.5
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 6.3e-28 129.8 641 27.9
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 8.2e-28 129.4 422 29.4
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 3.1e-27 127.5 574 28.7
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 3.1e-27 127.5 674 27.7
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 7.0e-27 126.3 681 27.6
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 2.0e-26 124.8 674 27.0
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 2.6e-26 124.4 490 28.8
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 2.6e-26 124.4 641 27.0
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 3.5e-26 124.0 667 26.5
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.2e-25 121.3 658 26.6
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 3.8e-25 120.6 471 27.4
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 1.1e-24 119.0 624 27.1
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 1.5e-24 118.6 620 27.3
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 1.5e-24 118.6 647 27.2
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.5e-24 117.9 623 26.8
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.5e-24 117.9 623 26.8
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 5.5e-24 116.7 599 27.5
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 1.6e-23 115.2 654 27.2
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 3.6e-23 114.0 646 26.0
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 2.3e-22 111.3 439 27.8
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 5.2e-22 110.2 614 26.2
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 8.8e-22 109.4 649 26.0
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 8.8e-22 109.4 673 26.6
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 4.8e-20 103.6 657 26.5
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 8.2e-20 102.8 651 25.7
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 2.4e-19 101.3 609 23.0
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 2.4e-19 101.3 689 25.3
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 4.1e-19 100.5 477 25.2
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 7.0e-19 99.8 601 24.8
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 2.0e-18 98.2 634 26.0
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 3.5e-18 97.4 655 25.6
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 7.7e-18 96.3 632 26.7
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 2.9e-17 94.4 534 26.2
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 5.0e-17 93.6 640 24.8
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 8.5e-17 92.8 638 26.0
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 8.5e-17 92.8 675 26.1
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 1.9e-16 91.7 410 28.5
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 2.5e-16 91.3 359 27.9
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 5.5e-16 90.1 456 25.2
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 9.4e-16 89.4 441 25.6
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 2.1e-15 88.2 670 24.9
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 4.7e-15 87.0 466 24.7
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 8.0e-15 86.3 359 29.2
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 2.3e-14 84.7 697 25.4
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 8.8e-14 82.8 645 25.3
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 1.2e-13 82.4 657 25.7
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 4.4e-13 80.5 284 32.4
unitig_578.g16247 Utricularia gibba HOM05D007315 ORTHO05D008940 7.5e-13 79.7 299 26.4
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 1.3e-12 79.0 670 26.4
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 1.7e-12 78.6 656 25.3
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 1.7e-12 78.6 114 42.1
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 1.7e-12 78.6 274 35.4
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 3.7e-12 77.4 138 38.4
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 3.7e-12 77.4 675 24.7
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 8.3e-12 76.3 627 23.6
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 1.1e-11 75.9 574 24.7
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 1.1e-11 75.9 668 25.0
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 1.2e-10 72.4 665 24.8
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 2.7e-10 71.2 661 25.3
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 1.3e-09 68.9 434 25.8
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 1.7e-09 68.6 338 30.2
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 3.8e-09 67.4 225 30.2
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 2.5e-08 64.7 491 26.9
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 2.5e-08 64.7 317 29.7
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 1.6e-07 62.0 310 29.7
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 1.6e-07 62.0 620 24.4
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 2.1e-07 61.6 240 26.2
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 3.6e-07 60.8 354 29.4
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 1.8e-06 58.5 339 26.8
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 4.0e-06 57.4 606 24.4
SEGI_20190 Sequoiadendron giganteum HOM05D007315 ORTHO05D008940 5.2e-06 57.0 102 38.2


User provided reference genes

Program Settings