Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 3.6e-86 321.6 173 100.0
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 9.0e-53 210.7 172 69.8
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 1.4e-45 186.8 170 60.0
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 6.9e-45 184.5 170 61.8
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 6.9e-45 184.5 170 61.8
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 6.9e-45 184.5 170 61.8
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 9.0e-45 184.1 170 60.6
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 2.6e-44 182.6 170 60.6
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 3.2e-42 175.6 170 58.8
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 4.2e-42 175.3 174 56.9
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 7.2e-42 174.5 173 56.6
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 6.1e-41 171.4 173 57.8
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 6.1e-41 171.4 171 55.0
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 1.4e-40 170.2 170 57.1
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 3.0e-40 169.1 175 53.7
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 3.0e-40 169.1 171 56.7
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 5.7e-39 164.9 171 55.6
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 7.4e-39 164.5 173 54.3
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 7.4e-39 164.5 170 54.7
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 1.3e-38 163.7 175 54.3
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 1.3e-38 163.7 174 54.6
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 1.7e-38 163.3 174 54.0
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 2.8e-38 162.5 173 54.3
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 2.8e-38 162.5 173 54.3
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 2.8e-38 162.5 170 54.7
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 4.8e-38 161.8 170 54.7
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 6.3e-38 161.4 168 55.4
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 8.2e-38 161.0 172 52.3
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 1.1e-37 160.6 170 51.2
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 1.4e-37 160.2 173 54.3
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 1.4e-37 160.2 173 54.3
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 1.4e-37 160.2 173 54.3
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 2.4e-37 159.5 173 53.8
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 3.1e-37 159.1 173 53.2
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 3.1e-37 159.1 176 52.8
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 6.9e-37 157.9 173 52.6
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 1.0e-35 154.1 171 51.5
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 1.7e-35 153.3 173 52.6
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 1.7e-35 153.3 170 50.6
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 2.2e-35 152.9 175 53.1
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 2.9e-35 152.5 175 52.0
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 3.8e-35 152.1 169 52.7
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 8.5e-35 151.0 162 54.3
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 8.5e-35 151.0 173 51.4
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 1.1e-34 150.6 170 50.0
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 1.1e-34 150.6 170 50.0
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 1.1e-34 150.6 170 51.8
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 1.1e-34 150.6 172 50.0
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 1.1e-34 150.6 168 51.8
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.4e-34 150.2 168 52.4
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 1.4e-34 150.2 168 52.4
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 1.4e-34 150.2 171 51.5
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 2.5e-34 149.4 162 53.7
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 2.5e-34 149.4 170 52.4
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 4.2e-34 148.7 170 49.4
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 9.4e-34 147.5 169 52.7
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 1.2e-33 147.1 170 49.4
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.6e-33 146.7 168 51.2
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 2.1e-33 146.4 170 50.6
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 2.1e-33 146.4 163 50.9
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 7.9e-33 144.4 171 48.0
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 1.0e-32 144.1 180 51.7
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 3.0e-32 142.5 162 51.9
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 8.8e-32 141.0 170 48.2
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 2.6e-31 139.4 170 50.6
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 9.7e-31 137.5 170 47.6
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 1.3e-30 137.1 171 46.2
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 6.3e-30 134.8 170 47.1
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 1.4e-29 133.7 171 45.6
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 1.8e-29 133.3 166 46.4
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 2.4e-29 132.9 170 46.5
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 3.1e-29 132.5 171 45.0
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 4.1e-29 132.1 148 52.7
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 5.3e-29 131.7 171 48.5
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 9.1e-29 131.0 173 44.5
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 1.2e-28 130.6 170 44.1
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 1.5e-28 130.2 173 45.7
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 3.5e-28 129.0 160 48.1
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 2.2e-27 126.3 170 45.3
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 5.5e-26 121.7 169 42.6
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 1.6e-25 120.2 172 44.8
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 1.4e-24 117.1 168 42.9
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 3.0e-24 115.9 143 47.6
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 3.0e-24 115.9 170 42.4
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 3.0e-24 115.9 171 48.0
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 2.0e-23 113.2 172 43.6
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 2.6e-23 112.8 133 50.4
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 3.3e-23 112.5 166 42.2
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 9.7e-23 110.9 172 43.0
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 4.8e-22 108.6 154 41.6
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 9.1e-21 104.4 117 48.7
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 1.6e-17 93.6 170 38.2
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 8.8e-16 87.8 172 37.8
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 2.6e-15 86.3 148 45.9
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 4.1e-13 79.0 153 39.2
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 5.9e-12 75.1 120 41.7
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 2.2e-11 73.2 140 33.6
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 1.1e-10 70.9 152 33.6
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 2.7e-09 66.2 125 33.6
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 1.4e-08 63.9 183 29.0
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 2.8e-06 56.2 63 52.4


User provided reference genes

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