Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G10993 Striga asiatica HOM05D001620 ORTHO05D005461 1.7e-58 229.2 117 100.0
Migut.N03083 Erythranthe guttata HOM05D001620 ORTHO05D005461 1.2e-43 179.9 114 76.3
MSTRG.22018 Avicennia marina HOM05D001620 ORTHO05D005461 4.4e-43 177.9 117 76.9
SalBow6G2343 Salvia bowleyana HOM05D001620 ORTHO05D005461 5.9e-40 167.5 107 76.6
Dinv44168 Davidia involucrata HOM05D001620 ORTHO05D005461 1.6e-37 159.5 113 67.3
Oeu015935.2 Olea europaea HOM05D001620 ORTHO05D005461 9.8e-35 150.2 105 70.5
Sc19g0002780 Simmondsia chinensis HOM05D001620 ORTHO05D005461 1.1e-33 146.7 109 65.1
Solyc11g045220.2 Solanum lycopersicum HOM05D001620 ORTHO05D005461 1.4e-33 146.4 113 64.6
Sopen11g020680 Solanum pennellii HOM05D001620 ORTHO05D005461 1.4e-33 146.4 113 64.6
PGSC0003DMG400022873 Solanum tuberosum HOM05D001620 ORTHO05D005461 4.1e-33 144.8 111 64.9
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 2.0e-32 142.5 105 66.7
Nitab4.5_0001481g0050 Nicotiana tabacum HOM05D001620 ORTHO05D005461 3.5e-32 141.7 104 65.4
unitig_85.g27224 Utricularia gibba HOM05D004939 ORTHO05D005843 5.9e-32 141.0 107 65.4
ECA240G4634 Erigeron canadensis HOM05D001620 ORTHO05D005461 7.8e-32 140.6 113 61.1
Lsat_1_v5_gn_3_109820 Lactuca sativa HOM05D001620 ORTHO05D005461 1.3e-31 139.8 113 61.1
Prupe.1G201600 Prunus persica HOM05D001620 ORTHO05D005461 2.9e-31 138.7 110 63.6
Hund03188 Selenicereus undatus HOM05D001620 ORTHO05D005461 6.6e-31 137.5 107 61.7
Haze_01411 Corylus avellana HOM05D001620 ORTHO05D005461 7.3e-30 134.0 114 57.0
Thecc.04G171200 Theobroma cacao HOM05D001620 ORTHO05D005461 7.3e-30 134.0 112 57.1
Cc00_g03540 Coffea canephora HOM05D001620 ORTHO05D005461 1.2e-29 133.3 113 56.6
Haze_12936 Corylus avellana HOM05D001620 ORTHO05D005461 1.6e-29 132.9 107 59.8
Potri.007G134300 Populus trichocarpa HOM05D001620 ORTHO05D005461 4.7e-29 131.3 106 62.3
Eucgr.A00034 Eucalyptus grandis HOM05D001620 ORTHO05D005461 8.0e-29 130.6 111 55.9
Peaxi162Scf00126g00627 Petunia axillaris HOM05D001620 ORTHO05D005461 1.4e-28 129.8 134 52.2
ClCG07G015080 Citrullus lanatus HOM05D001620 ORTHO05D005461 4.0e-28 128.3 106 59.4
Ciclev10021852m.g Citrus clementina HOM05D001620 ORTHO05D005461 6.8e-28 127.5 109 57.8
Cc03_g12150 Coffea canephora HOM05D001620 ORTHO05D005461 2.0e-27 125.9 107 57.0
Medtr2g099410 Medicago truncatula HOM05D001620 ORTHO05D005461 4.4e-27 124.8 113 53.1
Nitab4.5_0002421g0040 Nicotiana tabacum HOM05D001620 ORTHO05D005461 2.4e-25 119.0 104 56.7
TPR.G22628 Trifolium pratense HOM05D001620 ORTHO05D005461 3.5e-24 115.2 113 49.6
COL.COLO4_28387 Corchorus olitorius HOM05D001620 ORTHO05D005461 1.7e-23 112.8 101 52.5
Eucgr.A00032 Eucalyptus grandis HOM05D001620 ORTHO05D005461 3.9e-23 111.7 109 49.5
arahy.Tifrunner.gnm1.ann1.G0W8DL Arachis hypogaea HOM05D001620 ORTHO05D005461 6.6e-23 110.9 106 51.9
Dinv25389 Davidia involucrata HOM05D001620 ORTHO05D005461 6.6e-23 110.9 87 62.1
Psat5g291680 Pisum sativum HOM05D001620 ORTHO05D005461 3.6e-21 105.1 113 46.9
Glyma.15G269900 Glycine max HOM05D001620 ORTHO05D005461 3.4e-19 98.6 109 44.0
MD04G1047000 Malus domestica HOM05D001620 ORTHO05D005461 9.8e-19 97.1 110 45.5
Phvul.005G155600 Phaseolus vulgaris HOM05D001620 ORTHO05D005461 1.7e-18 96.3 114 41.2
HPP92_013691 Vanilla planifolia HOM05D001620 ORTHO05D005461 3.7e-18 95.1 117 40.2
Gohir.A02G092600 Gossypium hirsutum HOM05D001620 ORTHO05D005461 1.4e-17 93.2 112 43.8
CDE02G0743 Ceratophyllum demersum HOM05D001620 ORTHO05D005461 1.9e-17 92.8 103 45.6
Eucgr.A00027 Eucalyptus grandis HOM05D001620 ORTHO05D005461 3.2e-17 92.0 135 38.5
Lj3g0024858 Lotus japonicus HOM05D001620 ORTHO05D005461 1.2e-16 90.1 106 41.5
Atru.chr4.1349 Acer truncatum HOM05D001620 ORTHO05D005461 2.7e-16 89.0 110 42.7
MBI17_g25734_MAGBIO Magnolia biondii HOM05D001620 ORTHO05D005461 4.6e-16 88.2 85 52.9
Haze_01414 Corylus avellana HOM05D001620 ORTHO05D005461 1.3e-15 86.7 107 42.1
HanXRQChr13g0419631 Helianthus annuus HOM05D001620 ORTHO05D005461 1.7e-15 86.3 177 33.3
GSVIVG01038096001 Vitis vinifera HOM05D001620 ORTHO05D005461 2.3e-15 85.9 113 43.4
arahy.Tifrunner.gnm1.ann1.UZY3CQ Arachis hypogaea HOM05D001620 ORTHO05D005461 6.6e-15 84.3 115 40.0
Gorai.005G125600 Gossypium raimondii HOM05D001620 ORTHO05D005461 1.1e-14 83.6 112 39.3
MBI07_g02902_MAGBIO Magnolia biondii HOM05D001620 ORTHO05D005461 2.5e-14 82.4 110 45.5
Cc03_g11940 Coffea canephora HOM05D001620 ORTHO05D005461 5.6e-14 81.3 113 39.8
SEGI_06390 Sequoiadendron giganteum HOM05D001620 ORTHO05D005461 9.5e-14 80.5 92 43.5
Gohir.D02G110700 Gossypium hirsutum HOM05D001620 ORTHO05D005461 2.8e-13 79.0 105 39.0
Cpa.g.sc9.334 Carica papaya HOM05D001620 ORTHO05D005461 4.7e-13 78.2 104 40.4
Cfa015222 Carpinus fangiana HOM05D001620 ORTHO05D005461 6.2e-13 77.8 109 41.3
Sabra07G0109000 Salix brachista HOM05D001620 ORTHO05D005461 6.2e-13 77.8 105 41.9
PSO675G0461 Papaver somniferum HOM05D001620 ORTHO05D005461 8.1e-13 77.4 116 37.1
EL10Ac3g06031 Beta vulgaris HOM05D001620 ORTHO05D005461 3.1e-12 75.5 109 37.6
PGR014G0005 Punica granatum HOM05D001620 ORTHO05D005461 6.8e-12 74.3 112 38.4
PGR083G0805 Punica granatum HOM05D001620 ORTHO05D005461 6.8e-12 74.3 112 38.4
AUR62023819 Chenopodium quinoa HOM05D001620 ORTHO05D005461 1.5e-11 73.2 114 35.1
TAR365G0548 Trochodendron aralioides HOM05D001620 ORTHO05D005461 4.4e-11 71.6 107 40.2
AUR62002366 Chenopodium quinoa HOM05D001620 ORTHO05D005461 5.8e-11 71.2 114 33.3
CiPaw.01G173100 Carya illinoinensis HOM05D001620 ORTHO05D005461 2.2e-10 69.3 112 33.0
Ca_01237_v3 Cicer arietinum L. HOM05D001620 ORTHO05D005461 2.9e-10 68.9 111 32.4
CANSAT54G0752 Cannabis sativa HOM05D001620 ORTHO05D005461 4.9e-10 68.2 109 37.6
Sed0025758 Sechium edule HOM05D001620 ORTHO05D005461 6.4e-10 67.8 109 37.6
Ah.07g202490 Amaranthus hybridus HOM05D001620 ORTHO05D005461 8.3e-10 67.4 114 33.3
SEGI_37669 Sequoiadendron giganteum HOM05D001620 ORTHO05D005461 8.3e-10 67.4 102 34.3
QL10p052582 Quercus lobata HOM05D001620 ORTHO05D005461 2.4e-09 65.9 105 36.2
Duzib212G0571 Durio zibethinus HOM05D001620 ORTHO05D005461 5.4e-09 64.7 112 33.9
Actinidia17986 Actinidia chinensis HOM05D001620 ORTHO05D005461 9.2e-09 63.9 104 39.4
Peaxi162Scf00126g00814 Petunia axillaris HOM05D001620 ORTHO05D005461 9.2e-09 63.9 104 36.5
ATR0743G190 Amborella trichopoda HOM05D001620 ORTHO05D005461 4.6e-08 61.6 109 32.1
Lj5P170T30 Lonicera japonica HOM05D001620 ORTHO05D005461 6.0e-08 61.2 102 37.3
GSVIVG01023856001 Vitis vinifera HOM05D001620 ORTHO05D005461 6.0e-08 61.2 104 36.5
Manes.11G127400 Manihot esculenta HOM05D001620 ORTHO05D005461 7.8e-08 60.8 113 35.4
PSO541G2761 Papaver somniferum HOM05D001620 ORTHO05D005461 1.3e-07 60.1 103 35.0
Cc05_g07730 Coffea canephora HOM05D006999 ORTHO05D008936 3.0e-07 58.9 70 42.9
Dinv29387 Davidia involucrata HOM05D006999 ORTHO05D008936 3.0e-07 58.9 69 44.9
Rhsim07G0221500 Rhododendron simsii HOM05D001620 ORTHO05D005461 3.9e-07 58.5 104 35.6
Sp6g36450 Schrenkiella parvula HOM05D006596 ORTHO05D008497 6.6e-07 57.8 85 37.6
Dinv39939 Davidia involucrata HOM05D006999 ORTHO05D008936 8.6e-07 57.4 69 42.0
Cc00_g29970 Coffea canephora HOM05D001620 ORTHO05D005461 1.1e-06 57.0 104 37.5
MELO3C017777.2 Cucumis melo HOM05D001620 ORTHO05D005461 1.1e-06 57.0 106 34.9
Lj2g0003627 Lotus japonicus HOM05D006999 ORTHO05D008936 2.5e-06 55.8 83 36.1
SEGI_20759 Sequoiadendron giganteum HOM05D001620 ORTHO05D003132 2.5e-06 55.8 98 33.7
CsaV3_4G002630 Cucumis sativus L. HOM05D001620 ORTHO05D005461 3.3e-06 55.5 114 30.7
DCAR_029911 Daucus carota HOM05D001620 ORTHO05D005461 4.3e-06 55.1 104 32.7
MSTRG.15411 Avicennia marina HOM05D006999 ORTHO05D008936 5.6e-06 54.7 83 38.6
BraA10t45038Z Brassica rapa HOM05D006596 ORTHO05D008497 5.6e-06 54.7 85 35.3
Lalb_Chr19g0138011 Lupinus albus HOM05D001620 ORTHO05D003132 5.6e-06 54.7 97 35.1
Ca_24822_v3 Cicer arietinum L. HOM05D006999 ORTHO05D008936 7.3e-06 54.3 83 36.1
VMungo1127G0017 Vigna mungo HOM05D001620 ORTHO05D003132 7.3e-06 54.3 91 35.2
Haze_15147 Corylus avellana HOM05D000909 ORTHO05D000928 9.5e-06 53.9 86 33.7
Hma1.2p1_2980F.1_g331210 Hydrangea macrophylla HOM05D006999 ORTHO05D008936 9.5e-06 53.9 85 38.8
Phvul.011G060800 Phaseolus vulgaris HOM05D001620 ORTHO05D003132 9.5e-06 53.9 91 35.2


User provided reference genes

Program Settings