Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 2.2e-129 465.7 240 100.0
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 9.3e-48 194.5 251 49.8
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 2.4e-43 179.9 243 46.9
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 2.4e-43 179.9 249 48.2
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 3.1e-43 179.5 251 45.4
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 2.6e-42 176.4 249 47.4
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 2.6e-42 176.4 250 45.2
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 2.9e-41 172.9 234 45.7
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 3.8e-41 172.6 215 47.9
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 6.4e-41 171.8 235 48.1
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 1.9e-40 170.2 253 45.8
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 1.9e-40 170.2 206 50.5
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 1.9e-40 170.2 208 49.0
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 7.1e-40 168.3 217 48.8
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 9.3e-40 167.9 229 47.6
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 7.9e-39 164.9 255 43.5
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 7.9e-39 164.9 196 50.0
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 2.3e-38 163.3 228 46.5
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 1.1e-37 161.0 253 44.7
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 1.5e-37 160.6 249 45.0
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 1.5e-37 160.6 235 44.7
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 1.5e-37 160.6 247 45.7
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 2.5e-37 159.8 240 45.0
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 4.3e-37 159.1 192 48.4
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 7.4e-37 158.3 236 42.8
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 9.6e-37 157.9 232 45.3
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 1.3e-36 157.5 232 46.6
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 2.8e-36 156.4 241 45.2
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 2.8e-36 156.4 254 42.9
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 6.2e-36 155.2 240 45.4
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 6.2e-36 155.2 239 44.4
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 6.2e-36 155.2 238 43.7
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 1.4e-35 154.1 236 44.1
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 1.8e-35 153.7 239 43.9
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 3.1e-35 152.9 224 46.4
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 3.1e-35 152.9 224 46.0
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 5.3e-35 152.1 217 44.2
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.2e-34 151.0 231 46.8
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 1.5e-34 150.6 202 49.0
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 2.0e-34 150.2 221 46.2
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 4.5e-34 149.1 211 46.0
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 1.7e-33 147.1 245 41.2
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 2.9e-33 146.4 204 44.6
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 3.8e-33 146.0 245 42.4
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 4.9e-33 145.6 248 42.3
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 4.9e-33 145.6 244 42.2
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 6.5e-33 145.2 249 42.2
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 8.4e-33 144.8 195 47.2
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 8.4e-33 144.8 196 46.4
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 1.1e-32 144.4 236 41.5
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.1e-32 144.4 216 43.1
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.1e-32 144.4 216 44.9
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 1.1e-32 144.4 217 41.5
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 1.1e-32 144.4 245 42.0
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.4e-32 144.1 231 43.7
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 1.4e-32 144.1 160 49.4
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 3.2e-32 142.9 241 42.3
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 3.2e-32 142.9 239 41.8
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 3.2e-32 142.9 240 39.6
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 4.2e-32 142.5 212 45.3
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 4.2e-32 142.5 234 42.7
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 9.3e-32 141.4 211 40.8
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 1.2e-31 141.0 244 43.4
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 1.2e-31 141.0 223 42.6
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 1.0e-30 137.9 238 41.2
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.0e-30 137.9 216 41.7
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 1.8e-30 137.1 212 42.9
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 3.9e-30 136.0 209 41.6
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 2.5e-29 133.3 214 41.1
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 4.3e-29 132.5 210 43.3
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 1.6e-28 130.6 214 42.5
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 1.6e-28 130.6 209 40.2
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 1.6e-28 130.6 225 41.3
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 8.2e-28 128.3 219 40.6
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 1.1e-27 127.9 206 42.2
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 1.1e-27 127.9 216 39.8
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.1e-27 127.9 216 39.8
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 1.4e-27 127.5 229 40.2
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 1.4e-27 127.5 229 38.9
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 1.8e-27 127.1 259 37.8
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 3.1e-27 126.3 241 36.9
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 3.1e-27 126.3 219 39.7
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 4.1e-27 125.9 227 40.5
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 9.0e-27 124.8 254 39.8
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 9.0e-27 124.8 254 39.8
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 9.0e-27 124.8 254 39.8
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 9.0e-27 124.8 225 40.9
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 1.2e-26 124.4 226 41.2
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 3.4e-26 122.9 206 40.3
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 1.3e-25 120.9 218 38.5
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.7e-25 120.6 234 37.2
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 5.0e-25 119.0 217 38.2
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 1.1e-24 117.9 228 39.0
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 1.1e-24 117.9 228 39.0
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 3.2e-24 116.3 238 38.2
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 7.2e-24 115.2 145 46.2
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 7.2e-24 115.2 145 46.2
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 1.2e-23 114.4 244 36.9
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 4.6e-23 112.5 198 37.4
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 7.9e-23 111.7 223 38.1
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 7.9e-23 111.7 223 38.1
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 2.3e-22 110.2 241 38.2
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 3.9e-22 109.4 147 44.2
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 3.9e-22 109.4 147 44.2
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 3.9e-22 109.4 147 44.2
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 5.1e-22 109.0 143 43.4
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 7.4e-21 105.1 218 36.2
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 8.2e-20 101.7 148 45.3
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 3.8e-17 92.8 141 39.7
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 3.8e-17 92.8 141 39.7
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 6.5e-17 92.0 164 36.6
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.1e-16 91.3 238 34.0
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 5.5e-16 89.0 220 34.1
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 7.2e-16 88.6 158 40.5
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 4.7e-15 85.9 115 45.2
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 2.3e-14 83.6 58 70.7
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 6.7e-14 82.0 218 32.6
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.5e-13 80.9 111 41.4
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 2.6e-13 80.1 135 37.0
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 7.4e-13 78.6 64 68.8
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 4.8e-12 75.9 201 31.3
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 1.8e-11 73.9 214 32.7
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 7.7e-10 68.6 136 34.6
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 7.7e-10 68.6 136 34.6
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 2.2e-09 67.0 38 71.1
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 6.7e-06 55.5 35 62.9


User provided reference genes

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