Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 0.0e+00 1276.9 631 100.0
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 9.9e-299 1029.6 656 78.5
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 8.9e-292 1006.5 634 78.7
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 8.7e-287 989.9 647 74.3
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 2.8e-285 984.9 602 80.4
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 1.2e-283 979.5 655 73.4
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 9.9e-283 976.5 655 73.1
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 1.7e-282 975.7 664 73.2
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 4.9e-282 974.2 655 73.0
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 1.4e-281 972.6 662 72.8
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 7.8e-280 966.8 645 74.6
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 2.5e-278 961.8 653 72.9
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 6.2e-277 957.2 650 72.8
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 8.1e-277 956.8 646 74.3
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.4e-276 956.1 652 72.7
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 3.1e-276 954.9 650 72.6
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 6.9e-276 953.7 652 71.9
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 6.9e-276 953.7 649 72.6
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 4.5e-275 951.0 653 71.5
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 7.6e-275 950.3 664 71.4
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 1.3e-274 949.5 620 75.6
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 4.9e-274 947.6 653 71.2
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 4.2e-273 944.5 666 70.3
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 5.4e-273 944.1 666 70.6
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 7.1e-273 943.7 659 70.9
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 2.1e-272 942.2 653 72.0
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 4.6e-272 941.0 666 70.4
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 3.9e-271 937.9 653 71.7
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 5.1e-271 937.6 679 70.1
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 5.1e-271 937.6 658 70.5
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 6.7e-271 937.2 633 72.2
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 6.7e-271 937.2 658 70.2
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 6.2e-269 930.6 661 71.0
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 1.1e-268 929.9 652 70.9
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 1.8e-268 929.1 652 71.0
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 1.7e-266 922.5 670 70.0
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 2.2e-266 922.2 604 74.5
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 2.9e-266 921.8 637 72.1
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 3.8e-266 921.4 632 72.0
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 6.4e-266 920.6 643 72.0
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 1.1e-265 919.8 645 70.9
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.9e-265 919.1 655 69.0
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 7.1e-265 917.1 660 69.5
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.2e-264 916.4 653 69.1
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 1.6e-264 916.0 654 70.5
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 3.5e-264 914.8 647 71.1
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 4.6e-264 914.4 652 68.9
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 7.9e-264 913.7 660 70.5
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 1.3e-263 912.9 633 70.0
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 2.3e-263 912.1 652 68.6
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 3.0e-263 911.8 655 68.9
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 8.7e-263 910.2 635 70.6
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 1.1e-262 909.8 647 70.3
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 1.5e-262 909.4 652 69.3
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 1.9e-262 909.1 640 72.7
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 5.6e-262 907.5 645 69.9
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 7.4e-262 907.1 633 70.3
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 1.6e-261 906.0 604 74.2
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 4.8e-261 904.4 605 74.0
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 6.2e-261 904.0 633 69.7
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 1.4e-260 902.9 632 69.6
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 1.4e-260 902.9 635 70.4
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 3.1e-260 901.7 638 70.7
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 3.1e-260 901.7 611 73.5
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 4.0e-260 901.4 655 67.9
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 5.3e-260 901.0 632 69.6
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 2.6e-259 898.7 600 73.8
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 5.8e-259 897.5 635 70.2
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 1.3e-258 896.3 633 68.9
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 2.2e-258 895.6 647 68.3
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 7.1e-257 890.6 653 68.0
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 3.5e-256 888.3 632 69.9
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 6.0e-256 887.5 661 66.9
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 6.0e-256 887.5 636 68.9
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 6.0e-256 887.5 625 71.2
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 7.9e-256 887.1 592 74.5
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 1.0e-255 886.7 638 68.2
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 1.0e-255 886.7 638 68.2
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 5.1e-255 884.4 638 68.0
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 1.5e-254 882.9 637 68.1
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 3.7e-253 878.2 638 67.7
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 4.8e-253 877.9 649 67.5
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 6.3e-253 877.5 598 72.4
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 1.4e-252 876.3 581 73.5
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 4.1e-252 874.8 648 65.9
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 6.9e-252 874.0 638 67.4
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 1.5e-251 872.8 632 69.1
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 3.4e-251 871.7 605 70.4
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 1.3e-250 869.8 589 73.0
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 3.8e-250 868.2 641 66.3
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 2.8e-245 852.0 604 69.7
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 1.1e-244 850.1 633 66.7
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 7.4e-238 827.4 633 64.9
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 6.3e-237 824.3 525 76.4
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 7.0e-236 820.8 712 57.7
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 4.7e-216 755.0 657 60.4
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 6.8e-215 751.1 644 59.2
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 1.2e-214 750.4 789 50.6
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 1.4e-212 743.4 519 69.4
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 2.4e-212 742.7 745 50.9
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 3.3e-209 732.3 747 51.0
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 1.1e-201 707.2 597 59.8
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 3.3e-201 705.7 862 44.9
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 3.6e-200 702.2 814 47.2
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 9.2e-196 687.6 459 73.9
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 3.5e-195 685.6 643 56.3
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 1.7e-186 656.8 456 69.5
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 6.2e-184 648.3 634 52.1
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 2.2e-165 586.6 509 59.7
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 4.3e-161 572.4 546 52.6
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.0e-158 563.5 423 66.4
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 3.4e-142 509.6 414 61.8
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 2.1e-115 420.6 307 66.4
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 2.8e-112 410.2 378 56.6
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 5.2e-106 389.4 263 72.2
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 1.1e-103 381.7 347 57.1
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 1.8e-95 354.4 241 69.7
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 1.3e-88 331.6 215 73.5
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 3.7e-88 330.1 520 41.0
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 1.8e-87 327.8 323 52.3
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 2.8e-59 234.2 154 69.5
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 3.1e-42 177.6 428 30.6
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 3.5e-38 164.1 124 62.1
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 6.5e-32 143.3 139 54.0
Dinv38585 Davidia involucrata HOM05D005975 ORTHO05D007373 4.1e-10 70.9 74 47.3
Nn4g23789 Nelumbo nucifera HOM05D005975 ORTHO05D007373 5.3e-10 70.5 150 31.3
Lj9A429T53 Lonicera japonica HOM05D005975 ORTHO05D007373 2.2e-08 65.1 56 57.1
Cfa019814 Carpinus fangiana HOM05D005975 ORTHO05D007373 2.5e-07 61.6 44 61.4
Nn1g03516 Nelumbo nucifera HOM05D005975 ORTHO05D007373 7.9e-06 56.6 49 57.1


User provided reference genes

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