Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G10967 Striga asiatica HOM05D006409 ORTHO05D008250 7.6e-146 520.8 324 100.0
MSTRG.22971 Avicennia marina HOM05D006409 ORTHO05D008250 4.8e-47 192.6 391 38.9
Migut.I00315 Erythranthe guttata HOM05D006409 ORTHO05D008250 6.2e-47 192.2 334 52.1
SalBow5G3762 Salvia bowleyana HOM05D006409 ORTHO05D008250 2.1e-42 177.2 390 37.9
Oeu014392.1 Olea europaea HOM05D006409 ORTHO05D006262 3.8e-36 156.4 363 37.7
Nitab4.5_0005160g0050 Nicotiana tabacum HOM05D006409 ORTHO05D008250 1.1e-32 144.8 356 37.4
Sabra15G0078400 Salix brachista HOM05D006409 ORTHO05D008250 5.7e-32 142.5 347 35.2
Nitab4.5_0001961g0070 Nicotiana tabacum HOM05D006409 ORTHO05D008250 2.1e-31 140.6 351 35.6
DCAR_026015 Daucus carota HOM05D006409 ORTHO05D008250 2.8e-31 140.2 331 39.3
MD14G1208800 Malus domestica HOM05D006409 ORTHO05D008250 1.2e-29 134.8 349 37.8
Peaxi162Scf00106g00081 Petunia axillaris HOM05D006409 ORTHO05D008250 2.2e-28 130.6 350 33.4
Ciclev10020474m.g Citrus clementina HOM05D006409 ORTHO05D008250 3.2e-27 126.7 351 32.5
TAR629G2567 Trochodendron aralioides HOM05D006409 ORTHO05D008250 7.9e-26 122.1 356 31.7
Carub.0008s2186 Capsella rubella HOM05D006409 ORTHO05D008250 2.3e-25 120.6 345 31.6
Rhsim08G0148500 Rhododendron simsii HOM05D006409 ORTHO05D008250 2.3e-25 120.6 324 34.3
Thecc.03G097200 Theobroma cacao HOM05D006409 ORTHO05D008250 5.1e-25 119.4 351 32.2
PGR083G0341 Punica granatum HOM05D006409 ORTHO05D008250 6.7e-25 119.0 322 34.5
Potri.015G048900 Populus trichocarpa HOM05D006409 ORTHO05D008250 1.3e-23 114.8 353 32.6
Solyc12g036300.3 Solanum lycopersicum HOM05D006409 ORTHO05D008250 1.3e-23 114.8 342 32.5
Sopen12g016610 Solanum pennellii HOM05D006409 ORTHO05D008250 6.3e-23 112.5 342 32.2
CARHR205310 Cardamine hirsuta HOM05D006409 ORTHO05D008250 1.8e-22 110.9 334 32.0
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 4.1e-22 109.8 317 33.4
Cc00_g02320 Coffea canephora HOM05D006409 ORTHO05D008250 5.3e-22 109.4 317 31.9
QL10p018676 Quercus lobata HOM05D006409 ORTHO05D008250 3.4e-21 106.7 350 30.6
BcaB01g05645 Brassica carinata HOM05D006409 ORTHO05D008250 7.7e-21 105.5 345 31.0
THA.LOC104818336 Tarenaya hassleriana HOM05D006409 ORTHO05D008250 7.7e-21 105.5 329 30.4
Actinidia04843 Actinidia chinensis HOM05D006409 ORTHO05D008250 1.0e-20 105.1 213 38.0
CANSAT80G1113 Cannabis sativa HOM05D006409 ORTHO05D008250 1.3e-20 104.8 358 30.2
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 1.7e-20 104.4 352 32.4
CAN.G172.10 Capsicum annuum HOM05D006409 ORTHO05D008250 2.2e-20 104.0 307 32.6
Sp6g35060 Schrenkiella parvula HOM05D006409 ORTHO05D008250 2.9e-20 103.6 357 30.8
BcaC06g32511 Brassica carinata HOM05D001913 ORTHO05D008250 5.0e-20 102.8 345 30.4
BolC9t59643H Brassica oleracea HOM05D006409 ORTHO05D008250 5.0e-20 102.8 345 30.1
arahy.Tifrunner.gnm1.ann1.4D2E4C Arachis hypogaea HOM05D006409 ORTHO05D008250 8.5e-20 102.1 351 28.8
CiPaw.11G050000 Carya illinoinensis HOM05D006409 ORTHO05D008250 8.5e-20 102.1 329 31.0
FAN18G2755 Fragaria x ananassa HOM05D006409 ORTHO05D008250 1.4e-19 101.3 321 30.8
Actinidia09250 Actinidia chinensis HOM05D006409 ORTHO05D008250 5.5e-19 99.4 305 32.8
C03p03950 Brassica napus HOM05D006409 ORTHO05D008250 5.5e-19 99.4 346 30.1
BolC3t12932H Brassica oleracea HOM05D006409 ORTHO05D008250 5.5e-19 99.4 346 30.1
Duzib084G0027 Durio zibethinus HOM05D006409 ORTHO05D008250 7.2e-19 99.0 351 30.2
Prupe.5G201100 Prunus persica HOM05D006409 ORTHO05D008250 7.2e-19 99.0 327 32.1
AT5G61200 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 9.4e-19 98.6 302 31.5
Lj4g0024886 Lotus japonicus HOM05D006409 ORTHO05D008250 1.2e-18 98.2 348 29.3
RcHm_v2.0_Chr7g0182601 Rosa chinensis HOM05D006409 ORTHO05D008250 1.2e-18 98.2 328 29.9
PGSC0003DMG400012806 Solanum tuberosum HOM05D006409 ORTHO05D008250 1.2e-18 98.2 380 28.2
FAN13G1588 Fragaria x ananassa HOM05D006409 ORTHO05D008250 1.6e-18 97.8 321 30.5
Glyma.05G022800 Glycine max HOM05D006409 ORTHO05D008250 1.6e-18 97.8 328 30.5
AL8G37860 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 2.7e-18 97.1 348 30.2
Duzib068G0538 Durio zibethinus HOM05D006409 ORTHO05D008250 3.6e-18 96.7 180 38.9
CsaV3_1G005860 Cucumis sativus L. HOM05D006409 ORTHO05D008250 6.1e-18 95.9 201 36.8
arahy.Tifrunner.gnm1.ann1.PS4SMH Arachis hypogaea HOM05D006409 ORTHO05D008250 1.0e-17 95.1 351 27.9
MELO3C002015.2 Cucumis melo HOM05D006409 ORTHO05D008250 1.4e-17 94.7 201 36.3
Cpa.g.sc94.9 Carica papaya HOM05D006409 ORTHO05D008250 6.7e-17 92.4 358 28.2
VMungo1215G3198 Vigna mungo HOM05D006409 ORTHO05D008250 6.7e-17 92.4 323 30.7
Lalb_Chr13g0302951 Lupinus albus HOM05D006409 ORTHO05D008250 1.5e-16 91.3 352 30.7
Glyma.17G076800 Glycine max HOM05D006409 ORTHO05D008250 2.0e-16 90.9 351 28.5
PSO302G0195 Papaver somniferum HOM05D006409 ORTHO05D008250 2.5e-16 90.5 329 29.5
AT5G07890 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 5.7e-16 89.4 347 28.2
Gohir.D12G183500 Gossypium hirsutum HOM05D006409 ORTHO05D008250 5.7e-16 89.4 213 33.8
Gorai.008G196800 Gossypium raimondii HOM05D006409 ORTHO05D008250 5.7e-16 89.4 213 33.8
Cfa019299 Carpinus fangiana HOM05D006409 ORTHO05D008250 7.4e-16 89.0 328 29.3
Manes.14G084000 Manihot esculenta HOM05D006409 ORTHO05D008250 7.4e-16 89.0 347 28.8
Lj5A105T60 Lonicera japonica HOM05D006409 ORTHO05D008250 9.7e-16 88.6 326 28.5
Gohir.A12G180800 Gossypium hirsutum HOM05D006409 ORTHO05D008250 1.7e-15 87.8 213 33.8
AL6G18220 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 2.8e-15 87.0 347 27.4
vmacro17591 Vaccinium macrocarpon HOM05D006409 ORTHO05D008250 2.8e-15 87.0 231 33.8
C09p68980 Brassica napus HOM05D006409 ORTHO05D006405 1.1e-14 85.1 347 29.1
BraA10t44915Z Brassica rapa HOM05D001913 ORTHO05D006405 1.1e-14 85.1 345 28.4
Eucgr.B00571 Eucalyptus grandis HOM05D006409 ORTHO05D008250 1.4e-14 84.7 213 31.5
HanXRQChr09g0270151 Helianthus annuus HOM05D006409 ORTHO05D008250 1.4e-14 84.7 322 28.9
Nn4g23374 Nelumbo nucifera HOM05D006409 ORTHO05D008250 2.4e-14 84.0 313 32.3
ClCG04G011930 Citrullus lanatus HOM05D006409 ORTHO05D008250 9.1e-14 82.0 312 29.8
TWI81G1094 Tripterygium wilfordii HOM05D006409 ORTHO05D008250 9.1e-14 82.0 323 31.3
EL10Ac5g11100 Beta vulgaris HOM05D006409 ORTHO05D008250 1.2e-13 81.6 177 34.5
A03p03510 Brassica napus HOM05D006409 ORTHO05D008250 4.5e-13 79.7 349 28.1
Carub.0006s0678 Capsella rubella HOM05D006409 ORTHO05D008250 4.5e-13 79.7 329 27.7
BraA03t09701Z Brassica rapa HOM05D006409 ORTHO05D008250 5.9e-13 79.3 346 28.0
Sc04g0003080 Simmondsia chinensis HOM05D006409 ORTHO05D008250 7.7e-13 79.0 307 28.3
CDE06G0998 Ceratophyllum demersum HOM05D006409 ORTHO05D008250 2.2e-12 77.4 273 28.6
GSVIVG01007923001 Vitis vinifera HOM05D006409 ORTHO05D008250 2.2e-12 77.4 334 27.5
PSO017G5610 Papaver somniferum HOM05D006409 ORTHO05D008250 6.5e-12 75.9 330 27.3
FAN08G0388 Fragaria x ananassa HOM05D006409 ORTHO05D008250 8.5e-12 75.5 301 28.2
A10p28660 Brassica napus HOM05D006409 ORTHO05D008250 1.1e-11 75.1 345 27.0
PSO478G4763 Papaver somniferum HOM05D006409 ORTHO05D008250 3.2e-11 73.6 330 27.3
Phvul.L001604 Phaseolus vulgaris HOM05D006409 ORTHO05D008250 3.2e-11 73.6 288 28.5
Psat4g048440 Pisum sativum HOM05D006409 ORTHO05D008250 3.2e-11 73.6 239 29.3
Sed0008489 Sechium edule HOM05D006409 ORTHO05D008250 3.2e-11 73.6 201 32.3
BcaNung06903 Brassica carinata HOM05D006409 ORTHO05D008250 5.5e-11 72.8 349 27.2
ECA232G2526 Erigeron canadensis HOM05D006409 ORTHO05D008250 7.2e-11 72.4 295 27.1
C04p51620 Brassica napus HOM05D006409 ORTHO05D008250 9.4e-11 72.0 218 31.2
Ah.02g113920 Amaranthus hybridus HOM05D006409 ORTHO05D008250 1.2e-10 71.6 265 30.6
Medtr4g109330 Medicago truncatula HOM05D006409 ORTHO05D008250 2.7e-10 70.5 295 27.1
COL.COLO4_22753 Corchorus olitorius HOM05D006409 ORTHO05D008250 4.7e-10 69.7 343 27.4
Thhalv10013673m.g Eutrema salsugineum HOM05D006409 ORTHO05D008250 7.9e-10 68.9 337 24.9
HanXRQChr16g0502261 Helianthus annuus HOM05D006409 ORTHO05D008250 3.9e-09 66.6 295 28.8
BcaC02g08700 Brassica carinata HOM05D006409 ORTHO05D008250 5.1e-09 66.2 237 28.7
CANSAT80G0413 Cannabis sativa HOM05D006409 ORTHO05D008250 9.7e-08 62.0 178 30.9
BcaC02g08698 Brassica carinata HOM05D006409 ORTHO05D008250 6.3e-07 59.3 285 26.3
AUR62021594 Chenopodium quinoa HOM05D006409 ORTHO05D008250 1.1e-06 58.5 171 30.4
TPR.G2042 Trifolium pratense HOM05D006409 ORTHO05D008250 1.1e-06 58.5 327 25.7
ATR0064G033 Amborella trichopoda HOM05D006409 ORTHO05D008250 1.8e-06 57.8 362 26.0
FvH4_5g14277 Fragaria vesca HOM05D006409 ORTHO05D008250 1.8e-06 57.8 264 25.4
Haze_07680 Corylus avellana HOM05D006409 ORTHO05D008250 2.4e-06 57.4 235 28.9
Actinidia12838 Actinidia chinensis HOM05D006409 ORTHO05D008250 3.1e-06 57.0 41 75.6


User provided reference genes

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