Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 4.4e-155 551.2 270 100.0
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 6.4e-37 158.7 82 97.6
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 8.6e-34 148.3 82 90.2
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 8.6e-34 148.3 82 89.0
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 5.6e-33 145.6 81 87.7
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 9.5e-33 144.8 82 85.4
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 9.5e-33 144.8 82 85.4
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.6e-32 144.1 82 85.4
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 6.2e-32 142.1 82 81.7
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 1.5e-30 137.5 82 81.7
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 2.6e-30 136.7 82 80.5
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 2.6e-30 136.7 82 80.5
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 3.4e-30 136.3 77 85.7
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 4.9e-29 132.5 81 79.0
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 1.1e-28 131.3 77 80.5
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 1.4e-28 131.0 78 79.5
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 3.2e-28 129.8 94 70.2
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 3.2e-28 129.8 94 70.2
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 5.4e-28 129.0 81 77.8
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 5.4e-28 129.0 81 76.5
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 7.0e-28 128.6 77 79.2
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 7.0e-28 128.6 93 71.0
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 9.2e-28 128.3 81 76.5
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 1.2e-27 127.9 81 76.5
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.2e-27 127.9 81 76.5
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 1.2e-27 127.9 81 76.5
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.2e-27 127.9 80 77.5
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 1.6e-27 127.5 81 75.3
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 1.6e-27 127.5 81 74.1
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 2.7e-27 126.7 81 75.3
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 2.7e-27 126.7 81 75.3
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 2.7e-27 126.7 81 75.3
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 3.5e-27 126.3 80 76.2
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 3.5e-27 126.3 94 70.2
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 3.5e-27 126.3 73 83.6
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 4.6e-27 125.9 80 76.2
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 7.8e-27 125.2 80 75.0
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 7.8e-27 125.2 81 74.1
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 1.0e-26 124.8 81 76.5
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.3e-26 124.4 95 68.4
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 1.3e-26 124.4 82 72.0
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.7e-26 124.0 94 68.1
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 2.3e-26 123.6 80 75.0
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 2.3e-26 123.6 82 73.2
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 2.3e-26 123.6 82 72.0
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 2.3e-26 123.6 95 68.4
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 3.0e-26 123.2 94 67.0
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 3.0e-26 123.2 106 62.3
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 5.0e-26 122.5 82 68.3
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 6.6e-26 122.1 94 67.0
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 6.6e-26 122.1 82 70.7
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 6.6e-26 122.1 82 72.0
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 8.6e-26 121.7 82 68.3
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 8.6e-26 121.7 93 64.5
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 8.6e-26 121.7 81 67.9
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.1e-25 121.3 80 73.8
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 1.1e-25 121.3 95 67.4
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.1e-25 121.3 81 71.6
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 1.9e-25 120.6 81 72.8
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 1.9e-25 120.6 90 70.0
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 1.9e-25 120.6 82 69.5
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 1.9e-25 120.6 82 69.5
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.9e-25 120.6 77 75.3
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 2.5e-25 120.2 94 67.0
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 2.5e-25 120.2 82 70.7
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 2.5e-25 120.2 80 71.2
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 3.3e-25 119.8 81 71.6
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 3.3e-25 119.8 80 72.5
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 4.3e-25 119.4 77 72.7
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 4.3e-25 119.4 77 75.3
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 4.3e-25 119.4 95 65.3
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 4.3e-25 119.4 77 72.7
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.2e-24 117.9 94 66.0
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.2e-24 117.9 94 66.0
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 1.2e-24 117.9 94 66.0
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.2e-24 117.9 126 50.0
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.6e-24 117.5 92 64.1
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 1.6e-24 117.5 77 72.7
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 2.8e-24 116.7 77 70.1
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 2.8e-24 116.7 80 70.0
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 2.8e-24 116.7 77 70.1
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 3.6e-24 116.3 94 62.8
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 4.7e-24 115.9 83 69.9
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 4.7e-24 115.9 95 62.1
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 6.2e-24 115.5 81 67.9
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 6.2e-24 115.5 81 70.4
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 8.1e-24 115.2 90 62.2
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 8.1e-24 115.2 81 67.9
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 3.1e-23 113.2 80 65.0
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 3.1e-23 113.2 82 67.1
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 3.1e-23 113.2 101 58.4
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 3.1e-23 113.2 82 64.6
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 5.2e-23 112.5 82 67.1
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 5.2e-23 112.5 90 63.3
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 8.9e-23 111.7 90 63.3
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 8.9e-23 111.7 77 67.5
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 1.5e-22 110.9 82 67.1
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 2.0e-22 110.5 77 70.1
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 4.4e-22 109.4 80 67.5
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 7.5e-22 108.6 79 67.1
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 2.9e-21 106.7 119 50.4
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.0e-18 98.2 80 63.8
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 1.3e-18 97.8 82 58.5
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.7e-18 97.4 82 56.1
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 4.3e-17 92.8 86 55.8
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 1.4e-15 87.8 78 56.4
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 1.8e-15 87.4 71 62.0
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 8.9e-15 85.1 77 51.9
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 3.4e-14 83.2 77 48.1
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 1.2e-11 74.7 38 89.5
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 1.1e-09 68.2 48 70.8
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 2.1e-08 63.9 36 83.3
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 3.1e-07 60.1 46 63.0
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.2e-06 58.2 45 62.2
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 5.8e-06 55.8 45 60.0


User provided reference genes

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