Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G10890 Striga asiatica HOM05D009041 ORTHO05D010054 3.4e-94 348.2 161 100.0
SGA_v2.0_scaffold47G17570 Striga asiatica HOM05D009041 ORTHO05D010054 5.6e-73 277.7 145 89.7
SGA_v2.0_scaffold63G21825 Striga asiatica HOM05D009041 ORTHO05D010054 2.8e-56 222.2 125 84.8
SGA_v2.0_scaffold211G42151 Striga asiatica HOM05D009041 ORTHO05D010054 2.2e-32 142.9 134 56.0
SGA_v2.0_scaffold130G34321 Striga asiatica HOM05D009041 ORTHO05D010054 6.3e-32 141.4 103 64.1
SGA_v2.0_scaffold160G37740 Striga asiatica HOM05D009041 ORTHO05D010054 5.3e-31 138.3 130 54.6
SGA_v2.0_scaffold6G03390 Striga asiatica HOM05D009041 ORTHO05D010054 6.9e-31 137.9 117 53.8
SGA_v2.0_scaffold366G50039 Striga asiatica HOM05D009041 ORTHO05D010054 1.3e-29 133.7 116 57.8
SGA_v2.0_scaffold26G11342 Striga asiatica HOM05D009041 ORTHO05D010054 1.1e-28 130.6 123 52.0
SGA_v2.0_scaffold21G09336 Striga asiatica HOM05D009041 ORTHO05D010054 7.2e-28 127.9 120 52.5
SGA_v2.0_scaffold270G46313 Striga asiatica HOM05D009041 ORTHO05D010054 7.2e-28 127.9 83 69.9
SGA_v2.0_scaffold13G06721 Striga asiatica HOM05D009041 ORTHO05D010054 9.3e-28 127.5 123 51.2
SGA_v2.0_scaffold668G53413 Striga asiatica HOM05D009041 ORTHO05D010054 9.3e-28 127.5 110 58.2
SGA_v2.0_scaffold21G09437 Striga asiatica HOM05D009041 ORTHO05D010054 1.2e-27 127.1 99 61.6
SGA_v2.0_scaffold347G49563 Striga asiatica HOM05D009041 ORTHO05D010054 1.6e-27 126.7 113 56.6
SGA_v2.0_scaffold115G32155 Striga asiatica HOM05D009041 ORTHO05D010054 2.1e-27 126.3 127 47.2
SGA_v2.0_scaffold548G52852 Striga asiatica HOM05D009041 ORTHO05D010054 2.1e-27 126.3 127 47.2
SGA_v2.0_scaffold5G02531 Striga asiatica HOM05D009041 ORTHO05D010054 7.9e-27 124.4 103 53.4
SGA_v2.0_scaffold180G39666 Striga asiatica HOM05D000045 ORTHO05D010054 1.0e-26 124.0 109 54.1
SGA_v2.0_scaffold11G05825 Striga asiatica HOM05D009041 ORTHO05D010054 1.8e-26 123.2 103 52.4
SGA_v2.0_scaffold79G25579 Striga asiatica HOM05D009041 ORTHO05D010054 1.5e-25 120.2 105 49.5
SGA_v2.0_scaffold46G17333 Striga asiatica HOM05D009041 ORTHO05D010054 4.8e-24 115.2 70 67.1
SGA_v2.0_scaffold147G36271 Striga asiatica HOM05D009041 ORTHO05D010054 9.7e-17 90.9 81 50.6
SGA_v2.0_scaffold249G44954 Striga asiatica HOM05D009041 ORTHO05D010054 1.3e-16 90.5 81 50.6
SGA_v2.0_scaffold86G26862 Striga asiatica HOM05D000045 ORTHO05D010054 1.3e-16 90.5 76 52.6
SGA_v2.0_scaffold142G35653 Striga asiatica HOM05D009041 ORTHO05D010054 2.2e-16 89.7 76 56.6
SGA_v2.0_scaffold577G53016 Striga asiatica HOM05D009041 ORTHO05D010054 8.2e-16 87.8 60 68.3
SGA_v2.0_scaffold18G08321 Striga asiatica HOM05D009041 ORTHO05D010054 1.5e-14 83.6 61 57.4
TPR.G30322 Trifolium pratense HOM05D009041 ORTHO05D010054 2.6e-14 82.8 65 53.8
TPR.G33858 Trifolium pratense HOM05D001572 ORTHO05D000733 1.0e-13 80.9 65 52.3
SGA_v2.0_scaffold27G11549 Striga asiatica HOM05D009041 ORTHO05D010054 8.5e-13 77.8 106 42.5
SGA_v2.0_scaffold54G19493 Striga asiatica HOM05D009041 ORTHO05D010054 8.5e-13 77.8 59 54.2
EL10Ac5g11586 Beta vulgaris HOM05D000045 ORTHO05D000067 2.1e-11 73.2 90 40.0
EL10Ac6g14806 Beta vulgaris HOM05D000045 ORTHO05D000067 2.7e-11 72.8 85 41.2
ECA240G3819 Erigeron canadensis HOM05D000045 ORTHO05D000067 6.1e-11 71.6 93 36.6
EL10Ac2g02717 Beta vulgaris HOM05D000045 ORTHO05D000067 8.0e-11 71.2 85 40.0
EL10Ac3g06581 Beta vulgaris HOM05D000045 ORTHO05D000067 8.0e-11 71.2 85 40.0
EL10Ac5g12499 Beta vulgaris HOM05D000045 ORTHO05D000067 8.0e-11 71.2 97 39.2
EL10Ac6g13792 Beta vulgaris HOM05D000045 ORTHO05D000067 8.0e-11 71.2 85 40.0
EL10Ac8g19696 Beta vulgaris HOM05D000045 ORTHO05D000067 8.0e-11 71.2 97 39.2
EL10As3g23329 Beta vulgaris HOM05D000045 ORTHO05D000067 8.0e-11 71.2 85 40.0
HanXRQChr14g0449641 Helianthus annuus HOM05D000045 ORTHO05D000067 1.4e-10 70.5 105 38.1
Lj5g0021168 Lotus japonicus HOM05D000045 ORTHO05D000695 1.8e-10 70.1 67 49.3
Hund03678 Selenicereus undatus HOM05D004088 ORTHO05D010054 3.0e-10 69.3 73 42.5
EL10Ac2g03393 Beta vulgaris HOM05D009041 ORTHO05D010054 3.9e-10 68.9 67 40.3
ECA232G1430 Erigeron canadensis HOM05D000045 ORTHO05D000695 5.2e-10 68.6 93 35.5
SGA_v2.0_scaffold309G48184 Striga asiatica HOM05D014716 ORTHO05D010054 5.2e-10 68.6 106 37.7
Medtr6g060410 Medicago truncatula HOM05D009041 ORTHO05D010054 1.1e-09 67.4 66 48.5
EL10Ac4g09061 Beta vulgaris HOM05D010653 ORTHO05D013151 2.6e-09 66.2 141 34.8
EL10Ac5g11838 Beta vulgaris HOM05D000045 ORTHO05D010054 2.6e-09 66.2 122 36.1
EL10Ac8g19517 Beta vulgaris HOM05D000045 ORTHO05D010054 2.6e-09 66.2 122 36.9
EL10Ac2g03825 Beta vulgaris HOM05D000045 ORTHO05D010054 3.3e-09 65.9 139 35.3
EL10Ac6g15511 Beta vulgaris HOM05D000045 ORTHO05D010054 3.3e-09 65.9 139 35.3
EL10Ac8g19823 Beta vulgaris HOM05D000045 ORTHO05D010054 3.3e-09 65.9 139 35.3
EL10Ac9g22734 Beta vulgaris HOM05D000045 ORTHO05D010054 3.3e-09 65.9 139 35.3
ECA233G1000 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.3e-09 65.9 70 42.9
Hund10326 Selenicereus undatus HOM05D020589 ORTHO05D010054 4.4e-09 65.5 73 39.7
SGA_v2.0_scaffold108G30934 Striga asiatica HOM05D000045 ORTHO05D010054 4.4e-09 65.5 81 40.7
EL10Ac1g01865 Beta vulgaris HOM05D000045 ORTHO05D010054 5.7e-09 65.1 139 33.1
EL10Ac9g21271 Beta vulgaris HOM05D000045 ORTHO05D010054 5.7e-09 65.1 138 35.5
EL10Ac4g08992 Beta vulgaris HOM05D000045 ORTHO05D010054 7.4e-09 64.7 74 39.2
EL10Ac7g17203 Beta vulgaris HOM05D000045 ORTHO05D010054 7.4e-09 64.7 80 38.8
EL10Ac8g19058 Beta vulgaris HOM05D000045 ORTHO05D010054 7.4e-09 64.7 122 36.9
ECA248G3866 Erigeron canadensis HOM05D000045 ORTHO05D000067 7.4e-09 64.7 106 38.7
Hund25812 Selenicereus undatus HOM05D000045 ORTHO05D010054 7.4e-09 64.7 105 33.3
EL10Ac1g02190 Beta vulgaris HOM05D000045 ORTHO05D010054 9.7e-09 64.3 122 36.1
Hund04144 Selenicereus undatus HOM05D000045 ORTHO05D000695 1.3e-08 63.9 144 30.6
Medtr4g080290 Medicago truncatula HOM05D009041 ORTHO05D010054 1.7e-08 63.5 66 47.0
ECA247G1397 Erigeron canadensis HOM05D000583 ORTHO05D000442 2.2e-08 63.2 114 35.1
Atru.chr4.2343 Acer truncatum HOM05D000045 ORTHO05D000067 3.7e-08 62.4 63 47.6
Hund31201 Selenicereus undatus HOM05D000045 ORTHO05D000067 3.7e-08 62.4 94 35.1
Atru.chr4.2354 Acer truncatum HOM05D000045 ORTHO05D000067 4.8e-08 62.0 63 47.6
EL10Ac1g01998 Beta vulgaris HOM05D000045 ORTHO05D010054 6.3e-08 61.6 85 37.6
Nn1g09624 Nelumbo nucifera HOM05D000045 ORTHO05D000611 8.2e-08 61.2 66 37.9
ECA240G0952 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.1e-07 60.8 95 35.8
AUR62030095 Chenopodium quinoa HOM05D009508 ORTHO05D000695 1.8e-07 60.1 85 40.0
FvH4_3g29141 Fragaria vesca HOM05D000045 ORTHO05D021070 1.8e-07 60.1 67 38.8
TPR.G36565 Trifolium pratense HOM05D009041 ORTHO05D010054 1.8e-07 60.1 62 51.6
EL10Ac1g01220 Beta vulgaris HOM05D000045 ORTHO05D010054 4.1e-07 58.9 141 32.6
ECA234G2985 Erigeron canadensis HOM05D003566 ORTHO05D005288 4.1e-07 58.9 74 41.9
ECA236G4481 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.1e-07 58.9 74 41.9
ECA238G1220 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.1e-07 58.9 74 40.5
TAR376G0491 Trochodendron aralioides HOM05D000045 ORTHO05D000067 5.3e-07 58.5 70 37.1
EL10Ac9g22455 Beta vulgaris HOM05D010653 ORTHO05D010054 7.0e-07 58.2 119 32.8
HanXRQChr03g0071931 Helianthus annuus HOM05D000385 ORTHO05D000269 9.1e-07 57.8 109 28.4
Nn6g31599 Nelumbo nucifera HOM05D000045 ORTHO05D000067 1.2e-06 57.4 64 39.1
PSO170G0855 Papaver somniferum HOM05D000045 ORTHO05D000067 1.2e-06 57.4 68 33.8
Aqoxy2G04102 Aquilegia oxysepala HOM05D000045 ORTHO05D000611 1.6e-06 57.0 88 33.0
AUR62037106 Chenopodium quinoa HOM05D009508 ORTHO05D000695 1.6e-06 57.0 102 37.3
PSO541G5593 Papaver somniferum HOM05D000045 ORTHO05D000067 1.6e-06 57.0 59 42.4
TAR633G0558 Trochodendron aralioides HOM05D000045 ORTHO05D000611 1.6e-06 57.0 107 28.0
CDE06G1597 Ceratophyllum demersum HOM05D000045 ORTHO05D000611 2.6e-06 56.2 77 33.8
Dinv05506 Davidia involucrata HOM05D000045 ORTHO05D000067 2.6e-06 56.2 70 38.6
Medtr1g013060 Medicago truncatula HOM05D000045 ORTHO05D010054 2.6e-06 56.2 64 43.8
Hund04370 Selenicereus undatus HOM05D000045 ORTHO05D000695 2.6e-06 56.2 60 41.7
CDE04G0328 Ceratophyllum demersum HOM05D000045 ORTHO05D000611 3.5e-06 55.8 60 41.7
Duzib268G1506 Durio zibethinus HOM05D000045 ORTHO05D000611 3.5e-06 55.8 67 34.3
Hma1.2p1_0810F.1_g222000 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 3.5e-06 55.8 60 40.0
PSO017G1954 Papaver somniferum HOM05D000045 ORTHO05D000067 3.5e-06 55.8 68 32.4
PSO732G0561 Papaver somniferum HOM05D000045 ORTHO05D000611 3.5e-06 55.8 79 35.4
TAR633G0535 Trochodendron aralioides HOM05D000045 ORTHO05D000067 3.5e-06 55.8 55 43.6
Aqoxy6G03033 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.5e-06 55.5 57 38.6
arahy.Tifrunner.gnm1.ann1.036Q5Z Arachis hypogaea HOM05D000045 ORTHO05D000067 4.5e-06 55.5 62 41.9
arahy.Tifrunner.gnm1.ann1.NRKY30 Arachis hypogaea HOM05D000045 ORTHO05D000611 4.5e-06 55.5 58 41.4
arahy.Tifrunner.gnm1.ann1.VV1Q05 Arachis hypogaea HOM05D000045 ORTHO05D000611 4.5e-06 55.5 58 41.4
arahy.Tifrunner.gnm1.ann1.X31DKD Arachis hypogaea HOM05D000045 ORTHO05D000067 4.5e-06 55.5 62 41.9
Nn7g36622 Nelumbo nucifera HOM05D000045 ORTHO05D000611 4.5e-06 55.5 71 35.2
Peaxi162Scf00066g02121 Petunia axillaris HOM05D000045 ORTHO05D000611 4.5e-06 55.5 85 32.9
Peaxi162Scf00249g00025 Petunia axillaris HOM05D000045 ORTHO05D000611 4.5e-06 55.5 85 32.9
RcHm_v2.0_Chr1g0379201 Rosa chinensis HOM05D034295 ORTHO05D037479 4.5e-06 55.5 66 39.4
Solyc05g009583.1 Solanum lycopersicum HOM05D000045 ORTHO05D000611 4.5e-06 55.5 56 41.1
Aqoxy3G00990 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 5.9e-06 55.1 62 45.2
Aqoxy4G01093 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 5.9e-06 55.1 62 45.2
Aqoxy7G02431 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 5.9e-06 55.1 62 45.2
RcHm_v2.0_Chr7g0236661 Rosa chinensis HOM05D034295 ORTHO05D037479 5.9e-06 55.1 66 37.9
SGA_v2.0_scaffold278G46733 Striga asiatica HOM05D009041 ORTHO05D010054 5.9e-06 55.1 35 71.4
CDE06G1049 Ceratophyllum demersum HOM05D000045 ORTHO05D000611 7.7e-06 54.7 58 41.4
COL.COLO4_03304 Corchorus olitorius HOM05D000045 ORTHO05D000067 7.7e-06 54.7 62 38.7
Haze_01501 Corylus avellana HOM05D000045 ORTHO05D000611 7.7e-06 54.7 63 39.7
Duzib116G0469 Durio zibethinus HOM05D000045 ORTHO05D000067 7.7e-06 54.7 62 38.7
Manes.05G129400 Manihot esculenta HOM05D000045 ORTHO05D000067 7.7e-06 54.7 60 40.0
Peaxi162Scf00094g01124 Petunia axillaris HOM05D000045 ORTHO05D000611 7.7e-06 54.7 66 36.4
Potri.005G257600 Populus trichocarpa HOM05D000045 ORTHO05D000067 7.7e-06 54.7 60 41.7
Sabra05G0199500 Salix brachista HOM05D000045 ORTHO05D000067 7.7e-06 54.7 60 41.7
Hund09722 Selenicereus undatus HOM05D020589 ORTHO05D010054 7.7e-06 54.7 48 43.8
Solyc02g092170.1 Solanum lycopersicum HOM05D000045 ORTHO05D000611 7.7e-06 54.7 56 39.3
Solyc02g150118.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 7.7e-06 54.7 56 39.3
Solyc03g082435.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 7.7e-06 54.7 56 39.3
Solyc03g094125.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 7.7e-06 54.7 56 39.3
Solyc03g150148.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 7.7e-06 54.7 56 39.3
Solyc04g070995.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 7.7e-06 54.7 56 39.3
Solyc04g071265.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 7.7e-06 54.7 56 39.3
Solyc04g072045.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 7.7e-06 54.7 56 39.3
Solyc10g044585.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 7.7e-06 54.7 56 39.3
Solyc11g020215.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 7.7e-06 54.7 56 39.3
Thecc.08G098400 Theobroma cacao HOM05D000045 ORTHO05D000067 7.7e-06 54.7 62 38.7
TAR636G0377 Trochodendron aralioides HOM05D000045 ORTHO05D000611 7.7e-06 54.7 63 36.5


User provided reference genes

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