Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G10860 Striga asiatica HOM05D004983 ORTHO05D005847 9.7e-147 523.5 268 100.0
Migut.I00071 Erythranthe guttata HOM05D004983 ORTHO05D005847 8.9e-100 367.5 286 69.2
Oeu022186.1 Olea europaea HOM05D004983 ORTHO05D005847 3.6e-93 345.5 270 67.8
Hma1.2p1_0572F.1_g181120 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 3.2e-89 332.4 232 72.0
CAN.G999.9 Capsicum annuum HOM05D004983 ORTHO05D005847 3.5e-88 328.9 233 70.4
Solyc03g113590.3 Solanum lycopersicum HOM05D004983 ORTHO05D005847 4.6e-88 328.6 260 65.8
Sopen03g032630 Solanum pennellii HOM05D004983 ORTHO05D005847 1.7e-87 326.6 269 64.3
HanXRQChr02g0045351 Helianthus annuus HOM05D004983 ORTHO05D005847 1.9e-86 323.2 266 62.8
Nitab4.5_0008162g0040 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.9e-86 323.2 263 64.6
Cc04_g16050 Coffea canephora HOM05D004983 ORTHO05D005847 2.5e-86 322.8 241 68.0
RcHm_v2.0_Chr7g0180081 Rosa chinensis HOM05D004983 ORTHO05D005847 2.5e-86 322.8 223 73.5
Lsat_1_v5_gn_1_11380 Lactuca sativa HOM05D004983 ORTHO05D005847 3.3e-86 322.4 256 63.3
PGSC0003DMG400024570 Solanum tuberosum HOM05D004983 ORTHO05D005847 4.3e-86 322.0 270 63.0
Nitab4.5_0000026g0320 Nicotiana tabacum HOM05D004983 ORTHO05D005847 5.6e-86 321.6 257 66.5
Ciclev10021875m.g Citrus clementina HOM05D004983 ORTHO05D005847 1.1e-84 317.4 225 70.7
Potri.012G072800 Populus trichocarpa HOM05D004983 ORTHO05D005847 1.8e-84 316.6 271 62.4
Eucgr.B00384 Eucalyptus grandis HOM05D004983 ORTHO05D005847 2.4e-84 316.2 232 70.3
MD06G1184000 Malus domestica HOM05D004983 ORTHO05D005847 2.4e-84 316.2 267 64.8
Manes.06G098600 Manihot esculenta HOM05D004983 ORTHO05D005847 3.1e-84 315.8 273 63.4
GSVIVG01008095001 Vitis vinifera HOM05D004983 ORTHO05D005847 3.1e-84 315.8 230 67.8
CANSAT80G1912 Cannabis sativa HOM05D004983 ORTHO05D005847 1.2e-83 313.9 275 61.8
TAR374G1152 Trochodendron aralioides HOM05D000005 ORTHO05D000012 1.2e-83 313.9 227 68.3
VMungo1309G2496 Vigna mungo HOM05D004983 ORTHO05D005847 2.0e-83 313.2 218 71.6
Atru.chr9.2363 Acer truncatum HOM05D004983 ORTHO05D005847 2.6e-83 312.8 225 69.8
FAN18G0171 Fragaria x ananassa HOM05D004983 ORTHO05D005847 2.6e-83 312.8 222 71.6
FvH4_5g15990 Fragaria vesca HOM05D004983 ORTHO05D005847 3.4e-83 312.4 222 71.6
AUR62021780 Chenopodium quinoa HOM05D004983 ORTHO05D005847 7.6e-83 311.2 234 67.5
Lalb_Chr08g0236081 Lupinus albus HOM05D004983 ORTHO05D005847 9.9e-83 310.8 220 70.5
Prupe.5G182700 Prunus persica HOM05D004983 ORTHO05D005847 1.3e-82 310.5 225 70.2
AUR62008315 Chenopodium quinoa HOM05D004983 ORTHO05D005847 1.7e-82 310.1 264 62.9
PGR044G0258 Punica granatum HOM05D004983 ORTHO05D005847 6.4e-82 308.1 227 67.8
Dinv13111 Davidia involucrata HOM05D004983 ORTHO05D005847 8.4e-82 307.8 236 67.4
Sabra12G0052000 Salix brachista HOM05D004983 ORTHO05D005847 1.1e-81 307.4 279 59.9
Carub.0006s1121 Capsella rubella HOM05D004983 ORTHO05D005847 1.4e-81 307.0 268 60.1
FAN13G0935 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.9e-81 306.6 222 70.3
CiPaw.12G021900 Carya illinoinensis HOM05D004983 ORTHO05D005847 5.4e-81 305.1 251 64.5
Thhalv10014312m.g Eutrema salsugineum HOM05D004983 ORTHO05D005847 5.4e-81 305.1 249 63.5
Glyma.06G188000 Glycine max HOM05D004983 ORTHO05D005847 5.4e-81 305.1 221 68.8
AL6G23630 Arabidopsis lyrata HOM05D004983 ORTHO05D005847 7.1e-81 304.7 233 64.8
FAN04G0333 Fragaria x ananassa HOM05D004983 ORTHO05D005847 7.1e-81 304.7 259 62.9
vmacro19336 Vaccinium macrocarpon HOM05D004983 ORTHO05D005847 9.3e-81 304.3 295 54.9
Hund04599 Selenicereus undatus HOM05D004983 ORTHO05D005847 1.2e-80 303.9 247 64.8
BraA10t44577Z Brassica rapa HOM05D004983 ORTHO05D005847 1.6e-80 303.5 256 64.1
CARHR200420 Cardamine hirsuta HOM05D004983 ORTHO05D005847 1.6e-80 303.5 239 65.3
Glyma.04G177000 Glycine max HOM05D004983 ORTHO05D005847 1.6e-80 303.5 221 68.8
Medtr0168s0080 Medicago truncatula HOM05D004983 ORTHO05D005847 1.6e-80 303.5 220 68.6
Phvul.009G183500 Phaseolus vulgaris HOM05D004983 ORTHO05D005847 2.1e-80 303.1 232 67.7
Actinidia04943 Actinidia chinensis HOM05D004983 ORTHO05D005847 2.7e-80 302.8 238 64.3
arahy.Tifrunner.gnm1.ann1.GD66SW Arachis hypogaea HOM05D004983 ORTHO05D005847 3.5e-80 302.4 247 64.4
ECA247G1770 Erigeron canadensis HOM05D004983 ORTHO05D005847 3.5e-80 302.4 315 55.2
C02p05860 Brassica napus HOM05D001227 ORTHO05D001082 4.6e-80 302.0 258 61.6
TPR.G37260 Trifolium pratense HOM05D004983 ORTHO05D005847 6.0e-80 301.6 220 70.0
A10p25150 Brassica napus HOM05D004983 ORTHO05D005847 7.9e-80 301.2 268 61.9
BolC9t59243H Brassica oleracea HOM05D004983 ORTHO05D005847 7.9e-80 301.2 269 61.0
AT5G13050 Arabidopsis thaliana HOM05D004983 ORTHO05D005847 1.0e-79 300.8 263 60.1
Gohir.D10G187500 Gossypium hirsutum HOM05D004983 ORTHO05D005847 1.0e-79 300.8 235 66.4
C09p64060 Brassica napus HOM05D004983 ORTHO05D005847 1.3e-79 300.4 269 61.0
Haze_07411 Corylus avellana HOM05D004983 ORTHO05D005847 1.3e-79 300.4 261 61.3
CsaV3_1G001940 Cucumis sativus L. HOM05D004983 ORTHO05D005847 1.3e-79 300.4 247 64.0
Dinv19894 Davidia involucrata HOM05D004983 ORTHO05D005847 1.3e-79 300.4 241 64.7
QL10p014085 Quercus lobata HOM05D004983 ORTHO05D005847 1.3e-79 300.4 274 60.2
Rhsim08G0163200 Rhododendron simsii HOM05D004983 ORTHO05D005847 1.3e-79 300.4 313 52.7
A02p01650 Brassica napus HOM05D001227 ORTHO05D001082 2.3e-79 299.7 251 62.5
PSO591G0429 Papaver somniferum HOM05D004983 ORTHO05D005847 2.3e-79 299.7 248 63.3
arahy.Tifrunner.gnm1.ann1.TQ2Z41 Arachis hypogaea HOM05D004983 ORTHO05D005847 3.0e-79 299.3 232 67.2
BcaNung01856 Brassica carinata HOM05D001227 ORTHO05D001082 3.0e-79 299.3 272 59.2
BolC2t06531H Brassica oleracea HOM05D004983 ORTHO05D005847 3.9e-79 298.9 274 58.8
COL.COLO4_20718 Corchorus olitorius HOM05D004983 ORTHO05D005847 3.9e-79 298.9 228 68.0
Duzib205G0093 Durio zibethinus HOM05D004983 ORTHO05D005847 3.9e-79 298.9 212 70.8
EL10Ac5g10876 Beta vulgaris HOM05D004983 ORTHO05D005847 5.1e-79 298.5 260 60.8
Sp6g30930 Schrenkiella parvula HOM05D004983 ORTHO05D005847 6.7e-79 298.1 265 60.0
Sc12g0005910 Simmondsia chinensis HOM05D004983 ORTHO05D005847 6.7e-79 298.1 229 65.1
DCAR_016523 Daucus carota HOM05D004983 ORTHO05D005847 1.1e-78 297.4 282 58.2
Aa31LG3G14620 Aethionema arabicum HOM05D004983 ORTHO05D005847 1.5e-78 297.0 275 58.5
BraA02t05144Z Brassica rapa HOM05D001227 ORTHO05D001082 1.9e-78 296.6 251 61.0
TWI75G1117 Tripterygium wilfordii HOM05D004983 ORTHO05D005847 2.5e-78 296.2 267 58.4
Aqoxy3G00847 Aquilegia oxysepala HOM05D004983 ORTHO05D005847 4.3e-78 295.4 238 62.2
Ah.02g112940 Amaranthus hybridus HOM05D004983 ORTHO05D005847 2.8e-77 292.7 260 60.8
Thecc.K0001100 Theobroma cacao HOM05D004983 ORTHO05D005847 1.1e-76 290.8 228 66.2
Peaxi162Scf00017g02122 Petunia axillaris HOM05D004983 ORTHO05D005847 3.4e-75 285.8 269 58.4
QL03p067725 Quercus lobata HOM05D004983 ORTHO05D005847 4.5e-75 285.4 259 57.9
CSS0013980 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 1.3e-74 283.9 260 57.7
TPR.G19166 Trifolium pratense HOM05D004983 ORTHO05D005847 1.7e-74 283.5 206 68.4
QL03p067716 Quercus lobata HOM05D004983 ORTHO05D005847 2.2e-74 283.1 259 57.5
Ah.11g048970 Amaranthus hybridus HOM05D004983 ORTHO05D005847 4.9e-74 282.0 260 59.2
Gohir.D12G050100 Gossypium hirsutum HOM05D004983 ORTHO05D005847 4.9e-74 282.0 224 63.8
HPP92_026476 Vanilla planifolia HOM05D004983 ORTHO05D005847 8.4e-74 281.2 264 56.4
Ciclev10032272m.g Citrus clementina HOM05D004983 ORTHO05D005847 1.4e-73 280.4 270 54.8
Ah.02g112900 Amaranthus hybridus HOM05D004983 ORTHO05D005847 2.5e-73 279.6 245 60.4
unitig_27.g25109 Utricularia gibba HOM05D000870 ORTHO05D005847 3.2e-73 279.3 195 70.8
Gohir.A12G051800 Gossypium hirsutum HOM05D004983 ORTHO05D005847 4.2e-73 278.9 224 63.8
Gorai.008G053300 Gossypium raimondii HOM05D004983 ORTHO05D005847 4.2e-73 278.9 224 63.4
Haze_12108 Corylus avellana HOM05D004983 ORTHO05D005847 7.1e-73 278.1 258 57.0
Peaxi162Scf00496g00013 Petunia axillaris HOM05D004983 ORTHO05D005847 9.3e-73 277.7 217 65.0
CiPaw.05G143400 Carya illinoinensis HOM05D004983 ORTHO05D005847 1.2e-72 277.3 222 61.7
Prupe.1G263300 Prunus persica HOM05D004983 ORTHO05D005847 2.1e-72 276.6 278 56.1
Lj1g0016910 Lotus japonicus HOM05D004983 ORTHO05D005847 3.5e-72 275.8 198 69.7
HPP92_014218 Vanilla planifolia HOM05D004983 ORTHO05D005847 3.5e-72 275.8 264 56.1
Nn4g22978 Nelumbo nucifera HOM05D004983 ORTHO05D005847 4.6e-72 275.4 292 52.7
Thecc.02G237100 Theobroma cacao HOM05D004983 ORTHO05D005847 1.8e-71 273.5 259 57.5
Os07g0578600 Oryza sativa ssp. japonica HOM05D004983 ORTHO05D005847 2.3e-71 273.1 216 63.0
arahy.Tifrunner.gnm1.ann1.G2IRY3 Arachis hypogaea HOM05D004983 ORTHO05D005847 3.9e-71 272.3 272 55.5
ATR0665G657 Amborella trichopoda HOM05D004983 ORTHO05D005847 5.1e-71 271.9 248 58.1
CDE07G0592 Ceratophyllum demersum HOM05D004983 ORTHO05D005847 1.1e-70 270.8 266 53.8
arahy.Tifrunner.gnm1.ann1.N4VW2L Arachis hypogaea HOM05D004983 ORTHO05D005847 2.5e-70 269.6 281 54.1
RcHm_v2.0_Chr4g0445021 Rosa chinensis HOM05D004983 ORTHO05D005847 5.6e-70 268.5 255 56.1
SalBow5G1630 Salvia bowleyana HOM05D004983 ORTHO05D005847 9.6e-70 267.7 288 57.3
Zm00001eb107660 Zea mays HOM05D004983 ORTHO05D005847 9.6e-70 267.7 235 58.3
FvH4_4g35410 Fragaria vesca HOM05D004983 ORTHO05D005847 3.7e-69 265.8 276 54.0
Atru.chr11.1914 Acer truncatum HOM05D004983 ORTHO05D005847 1.4e-68 263.8 207 62.3
AUR62021779 Chenopodium quinoa HOM05D004983 ORTHO05D005847 5.3e-68 261.9 222 62.6
Gorai.011G210300 Gossypium raimondii HOM05D004983 ORTHO05D005847 1.7e-66 256.9 233 58.8
FAN07G1154 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.4e-65 253.8 295 49.5
BcaNung01178 Brassica carinata HOM05D004983 ORTHO05D005847 1.2e-64 250.8 272 52.2
MELO3C017137.2 Cucumis melo HOM05D004983 ORTHO05D005847 6.7e-63 245.0 255 54.5
Lj9A456T34 Lonicera japonica HOM05D004983 ORTHO05D005847 3.3e-62 242.7 153 75.8
Cpa.g.sc203.7 Carica papaya HOM05D004983 ORTHO05D005847 4.8e-61 238.8 268 52.6
CSS0025366 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 1.4e-60 237.3 146 77.4
Nitab4.5_0000642g0190 Nicotiana tabacum HOM05D004983 ORTHO05D005847 6.9e-60 235.0 228 58.8
FAN22G0524 Fragaria x ananassa HOM05D004983 ORTHO05D005847 2.0e-59 233.4 282 48.6
AagrBONN_evm.TU.Sc2ySwM_362.273 Anthoceros agrestis HOM05D004983 ORTHO05D005847 1.0e-58 231.1 219 56.2
SMO271G0141 Selaginella moellendorffii HOM05D004983 ORTHO05D005847 1.0e-58 231.1 224 53.6
Mapoly0019s0150 Marchantia polymorpha HOM05D004983 ORTHO05D005847 1.3e-58 230.7 234 52.6
Nn4g24106 Nelumbo nucifera HOM05D004983 ORTHO05D005847 8.5e-58 228.0 222 55.4
FAN12G3769 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.1e-57 227.6 315 45.1
Psat5g181720 Pisum sativum HOM05D004983 ORTHO05D005847 9.4e-57 224.6 141 75.9
Sed0011699 Sechium edule HOM05D004983 ORTHO05D005847 9.4e-57 224.6 188 62.2
MD16G1082800 Malus domestica HOM05D004983 ORTHO05D005847 2.1e-56 223.4 232 52.2
Gohir.A10G180700 Gossypium hirsutum HOM05D004983 ORTHO05D005847 1.0e-55 221.1 144 74.3
Duzib251G0645 Durio zibethinus HOM05D004983 ORTHO05D005847 1.8e-55 220.3 233 52.8
Nitab4.5_0002376g0010 Nicotiana tabacum HOM05D004983 ORTHO05D005847 8.8e-55 218.0 291 43.6
Dinv31146 Davidia involucrata HOM05D004983 ORTHO05D005847 1.5e-54 217.2 169 63.3
Atru.chr11.1910 Acer truncatum HOM05D004983 ORTHO05D005847 9.1e-52 208.0 150 68.7
Nitab4.5_0009486g0020 Nicotiana tabacum HOM05D004983 ORTHO05D005847 6.5e-50 201.8 147 71.4
Nitab4.5_0000710g0080 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.8e-44 183.7 156 57.7
CBR_g34194 Chara braunii HOM05D004983 ORTHO05D005847 2.2e-42 176.8 225 43.6
Hma1.2p1_4120F.1_g338320 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 6.1e-40 168.7 98 81.6
Pp3c3_32060 Physcomitrium patens HOM05D004983 ORTHO05D005847 3.9e-39 166.0 172 50.6
Pp3c12_22470 Physcomitrium patens HOM05D004983 ORTHO05D005847 3.3e-38 162.9 173 50.9
SEGI_36548 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 4.1e-36 156.0 147 55.1
GSVIVG01020126001 Vitis vinifera HOM05D004983 ORTHO05D005847 2.0e-30 137.1 129 55.8
Cre09.g403293 Chlamydomonas reinhardtii HOM05D004983 ORTHO05D005847 2.2e-29 133.7 203 40.4
SEGI_02343 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 1.4e-23 114.4 94 62.8
PRCOL_00002663 Prasinoderma coloniale HOM05D004983 ORTHO05D005847 2.8e-21 106.7 231 34.2
MCO01G728 Micromonas commoda HOM05D004983 ORTHO05D005847 4.8e-21 105.9 235 33.6
FAN17G3002 Fragaria x ananassa HOM05D004983 ORTHO05D005847 5.9e-19 99.0 157 40.1
Psat0s864g0040 Pisum sativum HOM05D004983 ORTHO05D005847 2.3e-18 97.1 92 54.3
ClCG06G016570 Citrullus lanatus HOM05D004983 ORTHO05D005847 7.2e-17 92.0 103 49.5
Atru.chr11.1911 Acer truncatum HOM05D004983 ORTHO05D005847 9.5e-17 91.7 67 58.2
Nitab4.5_0000710g0100 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.9e-09 67.4 87 44.8
Cfa021669 Carpinus fangiana HOM05D004983 ORTHO05D005847 1.0e-07 61.6 166 29.5
Hund25310 Selenicereus undatus HOM05D004983 ORTHO05D005847 4.4e-06 56.2 142 33.1


User provided reference genes

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