Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G10748 Striga asiatica HOM05D001447 ORTHO05D005923 5.5e-107 391.0 195 100.0
MSTRG.11555 Avicennia marina HOM05D001447 ORTHO05D005923 5.8e-48 194.9 204 54.9
SalBow4G0828 Salvia bowleyana HOM05D001447 ORTHO05D005923 6.4e-39 164.9 208 48.1
Migut.O00259 Erythranthe guttata HOM05D001447 ORTHO05D005923 7.8e-37 157.9 199 48.7
Oeu038401.1 Olea europaea HOM05D001447 ORTHO05D005923 5.2e-33 145.2 207 44.0
Dinv36208 Davidia involucrata HOM05D001447 ORTHO05D005923 4.3e-27 125.6 215 41.4
Peaxi162Scf00394g00910 Petunia axillaris HOM05D001447 ORTHO05D005923 2.8e-26 122.9 186 41.4
Gohir.D09G108100 Gossypium hirsutum HOM05D001447 ORTHO05D005923 8.1e-26 121.3 212 38.7
Gorai.006G125800 Gossypium raimondii HOM05D001447 ORTHO05D005923 8.1e-26 121.3 212 38.7
CANSAT54G2333 Cannabis sativa HOM05D001447 ORTHO05D005923 4.0e-25 119.0 186 43.0
COL.COLO4_36479 Corchorus olitorius HOM05D001447 ORTHO05D005923 9.0e-25 117.9 190 38.4
Haze_23187 Corylus avellana HOM05D001447 ORTHO05D005923 1.2e-24 117.5 197 39.1
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 1.5e-24 117.1 197 39.6
Cc01_g06480 Coffea canephora HOM05D001447 ORTHO05D005923 1.5e-24 117.1 151 45.0
Gohir.A09G111500 Gossypium hirsutum HOM05D001447 ORTHO05D005923 2.6e-24 116.3 212 38.2
CiPaw.13G153600 Carya illinoinensis HOM05D001447 ORTHO05D005923 4.5e-24 115.5 205 38.5
Cpa.g.sc84.6 Carica papaya HOM05D001447 ORTHO05D005923 5.8e-24 115.2 94 61.7
DCAR_002089 Daucus carota HOM05D001447 ORTHO05D005923 5.8e-24 115.2 115 50.4
Solyc02g086250.4 Solanum lycopersicum HOM05D001447 ORTHO05D005923 7.6e-24 114.8 203 36.5
Sopen02g030930 Solanum pennellii HOM05D001447 ORTHO05D005923 9.9e-24 114.4 206 37.4
Ciclev10006845m.g Citrus clementina HOM05D001447 ORTHO05D005923 1.3e-23 114.0 108 53.7
TAR623G1061 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.3e-23 114.0 221 35.7
Nn2g15058 Nelumbo nucifera HOM05D001447 ORTHO05D005923 1.7e-23 113.6 94 61.7
CAN.G625.44 Capsicum annuum HOM05D001447 ORTHO05D005923 4.9e-23 112.1 200 36.0
MBI13_g04766_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D005923 4.9e-23 112.1 219 36.5
Thecc.09G241000 Theobroma cacao HOM05D001447 ORTHO05D005923 4.9e-23 112.1 212 37.7
Nitab4.5_0003652g0030 Nicotiana tabacum HOM05D001447 ORTHO05D005923 6.4e-23 111.7 204 33.3
Actinidia06934 Actinidia chinensis HOM05D001447 ORTHO05D008204 8.4e-23 111.3 119 48.7
Rhsim13G0217200 Rhododendron simsii HOM05D001447 ORTHO05D005923 8.4e-23 111.3 96 57.3
Hund21995 Selenicereus undatus HOM05D001447 ORTHO05D005923 8.4e-23 111.3 114 55.3
TWI23G0345 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 8.4e-23 111.3 94 59.6
Aa31LG8G6860 Aethionema arabicum HOM05D001447 ORTHO05D005923 1.1e-22 110.9 192 37.5
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 1.1e-22 110.9 133 48.1
THA.LOC104811411 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 1.9e-22 110.2 195 38.5
Duzib168G0657 Durio zibethinus HOM05D001447 ORTHO05D005923 2.4e-22 109.8 212 37.3
Eucgr.J00732 Eucalyptus grandis HOM05D001447 ORTHO05D005923 2.4e-22 109.8 220 35.5
PSO170G2976 Papaver somniferum HOM05D001447 ORTHO05D005923 2.4e-22 109.8 200 40.5
THA.LOC104809267 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 2.4e-22 109.8 110 51.8
TWI14G1124 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 2.4e-22 109.8 94 59.6
CARHR095600 Cardamine hirsuta HOM05D001447 ORTHO05D005923 4.2e-22 109.0 193 38.3
Manes.06G161200 Manihot esculenta HOM05D001447 ORTHO05D005923 4.2e-22 109.0 189 36.0
GSVIVG01031554001 Vitis vinifera HOM05D001447 ORTHO05D005923 4.2e-22 109.0 97 54.6
Prupe.4G257000 Prunus persica HOM05D001447 ORTHO05D005923 5.4e-22 108.6 225 34.7
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 7.1e-22 108.2 96 55.2
Manes.09G003800 Manihot esculenta HOM05D001447 ORTHO05D005923 9.3e-22 107.8 129 45.7
MELO3C014572.2 Cucumis melo HOM05D001447 ORTHO05D005923 1.2e-21 107.5 94 59.6
TAR369G0010 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.2e-21 107.5 94 57.4
Lalb_Chr17g0336631 Lupinus albus HOM05D001447 ORTHO05D005923 1.6e-21 107.1 155 41.3
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 2.1e-21 106.7 94 59.6
TAR623G0977 Trochodendron aralioides HOM05D001447 ORTHO05D005923 2.7e-21 106.3 94 56.4
VMungo0540G1247 Vigna mungo HOM05D001447 ORTHO05D003921 2.7e-21 106.3 95 60.0
Glyma.18G222500 Glycine max HOM05D001447 ORTHO05D005923 3.5e-21 105.9 203 38.4
Hma1.2p1_1503F.1_g287490 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 3.5e-21 105.9 195 36.9
AUR62000166 Chenopodium quinoa HOM05D001447 ORTHO05D005923 4.6e-21 105.5 109 52.3
MD11G1187600 Malus domestica HOM05D001447 ORTHO05D005923 4.6e-21 105.5 204 34.3
TAR623G1057 Trochodendron aralioides HOM05D001447 ORTHO05D005923 6.0e-21 105.1 220 34.5
Lalb_Chr20g0108071 Lupinus albus HOM05D001447 ORTHO05D005923 7.9e-21 104.8 103 54.4
Actinidia16355 Actinidia chinensis HOM05D001447 ORTHO05D005923 1.0e-20 104.4 95 53.7
Phvul.008G074800 Phaseolus vulgaris HOM05D001447 ORTHO05D005923 1.0e-20 104.4 219 34.7
CSS0020855 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005923 1.3e-20 104.0 100 54.0
MD03G1170100 Malus domestica HOM05D001447 ORTHO05D005923 2.3e-20 103.2 206 35.0
ECA233G1682 Erigeron canadensis HOM05D001447 ORTHO05D005923 3.0e-20 102.8 92 51.1
PSO384G1304 Papaver somniferum HOM05D001447 ORTHO05D005923 3.0e-20 102.8 202 35.1
Carub.0003s1999 Capsella rubella HOM05D001447 ORTHO05D005923 3.9e-20 102.4 117 50.4
Thhalv10021184m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 6.7e-20 101.7 205 34.1
Glyma.09G267400 Glycine max HOM05D001447 ORTHO05D005923 8.7e-20 101.3 98 53.1
Gorai.009G074300 Gossypium raimondii HOM05D001447 ORTHO05D005923 8.7e-20 101.3 214 35.5
Gohir.D05G073400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 1.1e-19 100.9 192 36.5
Lsat_1_v5_gn_2_28360 Lactuca sativa HOM05D001447 ORTHO05D005923 1.1e-19 100.9 202 34.7
arahy.Tifrunner.gnm1.ann1.Q3UL2U Arachis hypogaea HOM05D001447 ORTHO05D005923 1.5e-19 100.5 90 60.0
arahy.Tifrunner.gnm1.ann1.QJKL08 Arachis hypogaea HOM05D001447 ORTHO05D005923 1.5e-19 100.5 90 60.0
RcHm_v2.0_Chr5g0051191 Rosa chinensis HOM05D001447 ORTHO05D005923 1.5e-19 100.5 160 40.6
unitig_8.g3773 Utricularia gibba HOM05D001447 ORTHO05D005923 1.5e-19 100.5 94 53.2
Atru.chr3.2630 Acer truncatum HOM05D001447 ORTHO05D005923 1.9e-19 100.1 96 50.0
VMungo1383G2912 Vigna mungo HOM05D001447 ORTHO05D005923 1.9e-19 100.1 88 59.1
Medtr7g075050 Medicago truncatula HOM05D001447 ORTHO05D005923 2.5e-19 99.8 193 37.3
PSO339G5991 Papaver somniferum HOM05D001447 ORTHO05D005923 2.5e-19 99.8 202 35.1
PGR119G0225 Punica granatum HOM05D001447 ORTHO05D005923 2.5e-19 99.8 94 52.1
vmacro04118 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 3.3e-19 99.4 210 36.7
Gohir.A05G070400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 4.3e-19 99.0 218 35.3
Glyma.10G069400 Glycine max HOM05D001447 ORTHO05D005923 5.6e-19 98.6 88 60.2
Glyma.13G152406 Glycine max HOM05D001447 ORTHO05D005923 7.4e-19 98.2 96 55.2
TPR.G26927 Trifolium pratense HOM05D001447 ORTHO05D005923 7.4e-19 98.2 89 55.1
Ah.06g193790 Amaranthus hybridus HOM05D001447 ORTHO05D005923 9.6e-19 97.8 130 45.4
AL3G33750 Arabidopsis lyrata HOM05D001447 ORTHO05D005923 9.6e-19 97.8 198 35.4
Hma1.2p1_1116F.1_g258880 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 9.6e-19 97.8 95 54.7
Medtr8g059560 Medicago truncatula HOM05D001447 ORTHO05D005923 9.6e-19 97.8 193 36.8
QL01p018064 Quercus lobata HOM05D001447 ORTHO05D005923 1.3e-18 97.4 94 52.1
AT3G20070 Arabidopsis thaliana HOM05D001447 ORTHO05D005923 2.1e-18 96.7 198 34.3
LjContig00136g0008106 Lotus japonicus HOM05D001447 ORTHO05D005923 2.1e-18 96.7 88 59.1
Sp3g18100 Schrenkiella parvula HOM05D001447 ORTHO05D005923 3.7e-18 95.9 146 41.1
BcaB06g26078 Brassica carinata HOM05D001447 ORTHO05D005923 4.8e-18 95.5 117 46.2
AUR62039845 Chenopodium quinoa HOM05D001447 ORTHO05D005923 8.1e-18 94.7 157 37.6
FAN16G0976 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.4e-17 94.0 93 47.3
FAN21G0933 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.4e-17 94.0 93 47.3
FAN25G1867 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.4e-17 94.0 93 47.3
BcaC05g28363 Brassica carinata HOM05D001447 ORTHO05D005923 2.4e-17 93.2 212 33.0
FvH4_3g28310 Fragaria vesca HOM05D001447 ORTHO05D005923 2.4e-17 93.2 93 47.3
FAN11G3154 Fragaria x ananassa HOM05D001447 ORTHO05D005923 2.4e-17 93.2 93 47.3
HPP92_015725 Vanilla planifolia HOM05D001447 ORTHO05D005923 3.1e-17 92.8 93 48.4
Lj2A623T26 Lonicera japonica HOM05D001447 ORTHO05D005923 4.0e-17 92.4 205 35.1
A05p29010 Brassica napus HOM05D001447 ORTHO05D005923 5.3e-17 92.0 117 47.0
BraA05t21783Z Brassica rapa HOM05D001447 ORTHO05D005923 5.3e-17 92.0 117 47.0
Nitab4.5_0000753g0110 Nicotiana tabacum HOM05D001447 ORTHO05D005923 5.3e-17 92.0 204 29.9
C05p44410 Brassica napus HOM05D001447 ORTHO05D005923 9.0e-17 91.3 217 33.6
BolC5t33164H Brassica oleracea HOM05D001447 ORTHO05D005923 9.0e-17 91.3 217 33.6
Lj5A793G14 Lonicera japonica HOM05D001447 ORTHO05D005923 9.0e-17 91.3 201 33.3
Aqoxy2G00276 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 1.2e-16 90.9 94 53.2
CDE02G0596 Ceratophyllum demersum HOM05D001447 ORTHO05D005923 1.5e-16 90.5 147 35.4
Sc09g0000900 Simmondsia chinensis HOM05D001447 ORTHO05D005923 2.0e-16 90.1 195 36.9
HanXRQChr14g0441711 Helianthus annuus HOM05D001447 ORTHO05D005923 1.3e-15 87.4 200 33.5
Sed0027916 Sechium edule HOM05D001447 ORTHO05D005923 1.3e-15 87.4 59 66.1
ATR0681G241 Amborella trichopoda HOM05D001447 ORTHO05D005923 1.7e-15 87.0 92 50.0
Potri.009G049500 Populus trichocarpa HOM05D001447 ORTHO05D005923 1.7e-15 87.0 91 47.3
vmacro10456 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 2.2e-15 86.7 225 33.3
ECA234G3051 Erigeron canadensis HOM05D001447 ORTHO05D005923 2.9e-15 86.3 197 33.0
Aqoxy2G00275 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 3.2e-14 82.8 106 49.1
Os06g0245600 Oryza sativa ssp. japonica HOM05D001447 ORTHO05D005923 5.5e-14 82.0 193 29.5
PSO210G7517 Papaver somniferum HOM05D001447 ORTHO05D005923 9.3e-14 81.3 75 58.7
SHI27451 Sapria himalayana HOM05D001447 ORTHO05D000654 1.2e-13 80.9 146 34.2
Psat3g114240 Pisum sativum HOM05D001447 ORTHO05D005923 3.5e-13 79.3 93 48.4
Zm00001eb128570 Zea mays HOM05D001447 ORTHO05D005923 1.3e-12 77.4 91 44.0
BcaB01g01441 Brassica carinata HOM05D001447 ORTHO05D005923 5.1e-12 75.5 93 44.1
EL10Ac4g10184 Beta vulgaris HOM05D001447 ORTHO05D005923 5.6e-11 72.0 92 42.4
SEGI_06958 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 5.6e-11 72.0 110 31.8
TAR622G0649 Trochodendron aralioides HOM05D000050 ORTHO05D000654 1.3e-10 70.9 56 58.9
TAR623G0319 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.1e-09 67.8 184 30.4
BcaB02g07197 Brassica carinata HOM05D001447 ORTHO05D005923 1.2e-08 64.3 120 38.3
TAR623G0653 Trochodendron aralioides HOM05D001447 ORTHO05D005923 6.5e-07 58.5 55 58.2
SEGI_16617 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 1.4e-06 57.4 91 36.3
Thhalv10023995m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 7.1e-06 55.1 148 32.4


User provided reference genes

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