Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G10747 Striga asiatica HOM05D002890 ORTHO05D005855 0.0e+00 1271.1 656 100.0
MSTRG.23208 Avicennia marina HOM05D002890 ORTHO05D005855 1.3e-165 587.4 753 51.0
SalBow5G1338 Salvia bowleyana HOM05D002890 ORTHO05D005855 2.4e-146 523.5 717 48.7
Migut.O00260 Erythranthe guttata HOM05D002890 ORTHO05D005855 3.0e-125 453.4 654 49.2
Cc09_g01670 Coffea canephora HOM05D002890 ORTHO05D005855 5.8e-100 369.4 760 38.4
Oeu002905.1 Olea europaea HOM05D002890 ORTHO05D005855 4.6e-97 359.8 605 44.3
unitig_749.g13717 Utricularia gibba HOM05D002890 ORTHO05D005855 2.0e-92 344.4 522 45.0
Dinv13894 Davidia involucrata HOM05D002890 ORTHO05D005855 6.6e-88 329.3 753 37.5
Ciclev10010907m.g Citrus clementina HOM05D002890 ORTHO05D005855 3.3e-87 327.0 741 36.4
CSS0042685 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D005855 7.3e-87 325.9 754 37.5
Nitab4.5_0001678g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 7.3e-87 325.9 581 42.7
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 2.3e-85 320.9 783 36.0
Actinidia36598 Actinidia chinensis HOM05D002890 ORTHO05D005855 1.5e-84 318.2 625 40.0
Potri.011G003500 Populus trichocarpa HOM05D002890 ORTHO05D005855 3.4e-84 317.0 700 36.9
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 5.8e-84 316.2 764 36.9
MD10G1321400 Malus domestica HOM05D002890 ORTHO05D005855 7.6e-84 315.8 747 37.1
CAN.G65.76 Capsicum annuum HOM05D002890 ORTHO05D005855 1.7e-83 314.7 731 36.7
TAR629G0274 Trochodendron aralioides HOM05D002890 ORTHO05D005855 2.9e-83 313.9 689 38.3
QL03p063516 Quercus lobata HOM05D002890 ORTHO05D005855 3.7e-83 313.5 786 36.3
QL03p063938 Quercus lobata HOM05D002890 ORTHO05D005855 6.4e-83 312.8 786 36.3
Sopen06g028640 Solanum pennellii HOM05D002890 ORTHO05D005855 6.4e-83 312.8 727 37.7
TAR381G0565 Trochodendron aralioides HOM05D002890 ORTHO05D005855 1.1e-82 312.0 621 40.3
Duzib192G0355 Durio zibethinus HOM05D002890 ORTHO05D005855 2.4e-82 310.8 773 33.9
Nitab4.5_0000033g0410 Nicotiana tabacum HOM05D002890 ORTHO05D005855 3.2e-82 310.5 616 39.6
Thecc.06G220400 Theobroma cacao HOM05D002890 ORTHO05D005855 3.2e-82 310.5 741 35.8
Sabra11G0001700 Salix brachista HOM05D002890 ORTHO05D005855 4.1e-82 310.1 761 35.5
Haze_06800 Corylus avellana HOM05D002890 ORTHO05D005855 7.1e-82 309.3 765 36.9
Actinidia10696 Actinidia chinensis HOM05D002890 ORTHO05D005855 1.2e-81 308.5 631 39.5
Solyc06g072270.4 Solanum lycopersicum HOM05D002890 ORTHO05D005855 1.2e-81 308.5 725 37.4
Nitab4.5_0001247g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 6.0e-81 306.2 560 42.1
Lj1g0005233 Lotus japonicus HOM05D002890 ORTHO05D005855 7.3e-79 299.3 605 37.4
arahy.Tifrunner.gnm1.ann1.1MU60G Arachis hypogaea HOM05D002890 ORTHO05D005855 2.8e-78 297.4 708 35.3
arahy.Tifrunner.gnm1.ann1.3SKL4U Arachis hypogaea HOM05D002890 ORTHO05D005855 5.2e-77 293.1 710 35.2
Gohir.A10G012660 Gossypium hirsutum HOM05D002890 ORTHO05D005855 6.8e-77 292.7 772 32.9
Gorai.011G014000 Gossypium raimondii HOM05D002890 ORTHO05D005855 6.8e-77 292.7 772 32.9
Gohir.D10G012400 Gossypium hirsutum HOM05D002890 ORTHO05D005855 8.9e-77 292.4 767 33.2
Phvul.006G149850 Phaseolus vulgaris HOM05D002890 ORTHO05D005855 1.5e-76 291.6 771 34.4
Lj6g0006472 Lotus japonicus HOM05D002890 ORTHO05D005855 1.3e-75 288.5 679 35.5
TWI38G1984 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 2.2e-75 287.7 707 35.6
COL.COLO4_31775 Corchorus olitorius HOM05D002890 ORTHO05D005855 1.4e-74 285.0 769 34.1
MD05G1346800 Malus domestica HOM05D002890 ORTHO05D005855 5.4e-74 283.1 770 33.4
VMungo0540G2163 Vigna mungo HOM05D002890 ORTHO05D005855 7.1e-74 282.7 763 33.4
VMungo1309G2953 Vigna mungo HOM05D002890 ORTHO05D005855 9.3e-74 282.3 763 34.5
Rhsim06G0075600 Rhododendron simsii HOM05D002890 ORTHO05D005855 3.5e-73 280.4 649 35.9
Glyma.13G204900 Glycine max HOM05D002890 ORTHO05D005855 4.6e-73 280.0 763 33.4
TWI38G1729 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 2.3e-72 277.7 761 33.9
CiPaw.09G092000 Carya illinoinensis HOM05D002890 ORTHO05D005855 1.1e-71 275.4 750 33.7
Glyma.15G107800 Glycine max HOM05D002890 ORTHO05D005855 1.9e-71 274.6 764 33.5
Prupe.4G020900 Prunus persica HOM05D002890 ORTHO05D005855 9.6e-71 272.3 748 34.5
Ca_00660_v3 Cicer arietinum L. HOM05D002890 ORTHO05D005855 1.3e-70 271.9 591 38.4
vmacro21934 Vaccinium macrocarpon HOM05D002890 ORTHO05D005855 1.3e-70 271.9 628 36.9
PGR042G1125 Punica granatum HOM05D002890 ORTHO05D005855 2.1e-70 271.2 675 35.1
Atru.chr10.2228 Acer truncatum HOM05D002890 ORTHO05D005855 1.8e-69 268.1 506 38.5
Psat3g207880 Pisum sativum HOM05D002890 ORTHO05D005855 5.3e-69 266.5 598 38.0
RcHm_v2.0_Chr5g0002971 Rosa chinensis HOM05D002890 ORTHO05D005855 6.9e-69 266.2 557 37.0
Eucgr.E04054 Eucalyptus grandis HOM05D002890 ORTHO05D005855 2.0e-68 264.6 733 32.6
C09p17660 Brassica napus HOM05D002890 ORTHO05D005855 3.4e-68 263.8 565 36.3
BolC9t54660H Brassica oleracea HOM05D002890 ORTHO05D005855 3.4e-68 263.8 565 36.3
TPR.G9950 Trifolium pratense HOM05D002890 ORTHO05D005855 1.7e-67 261.5 559 37.2
FAN21G0074 Fragaria x ananassa HOM05D002890 ORTHO05D005855 4.9e-67 260.0 553 37.1
Peaxi162Scf00643g00544 Petunia axillaris HOM05D002890 ORTHO05D005855 6.4e-67 259.6 725 34.6
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 5.4e-66 256.5 562 36.8
Manes.17G038900 Manihot esculenta HOM05D002890 ORTHO05D005855 5.4e-66 256.5 774 32.6
Lalb_Chr20g0118631 Lupinus albus HOM05D002890 ORTHO05D005855 9.3e-66 255.8 583 37.4
A09p14580 Brassica napus HOM05D002890 ORTHO05D005855 6.0e-65 253.1 567 36.5
BraA09t37106Z Brassica rapa HOM05D002890 ORTHO05D005855 6.0e-65 253.1 567 36.5
FAN25G2328 Fragaria x ananassa HOM05D002890 ORTHO05D005855 3.0e-64 250.8 556 35.6
HanXRQChr15g0470641 Helianthus annuus HOM05D002890 ORTHO05D005855 3.0e-64 250.8 622 35.4
THA.LOC104812970 Tarenaya hassleriana HOM05D002890 ORTHO05D005855 3.9e-64 250.4 593 35.1
Sc17g0007380 Simmondsia chinensis HOM05D002890 ORTHO05D005855 1.5e-63 248.4 634 36.0
Aqoxy1G00468 Aquilegia oxysepala HOM05D002890 ORTHO05D005855 3.3e-63 247.3 594 37.2
CANSAT56G4108 Cannabis sativa HOM05D002890 ORTHO05D005855 3.6e-62 243.8 666 34.1
Medtr2g023280 Medicago truncatula HOM05D002890 ORTHO05D005855 4.8e-62 243.4 596 35.7
ClCG10G002660 Citrullus lanatus HOM05D002890 ORTHO05D005855 6.2e-62 243.0 598 36.3
FvH4_3g02070 Fragaria vesca HOM05D002890 ORTHO05D005855 1.4e-61 241.9 735 32.8
Nitab4.5_0002954g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 2.4e-61 241.1 580 36.6
GSVIVG01012724001 Vitis vinifera HOM05D002890 ORTHO05D005855 2.4e-61 241.1 666 34.8
PSO017G2731 Papaver somniferum HOM05D002890 ORTHO05D005855 4.0e-61 240.4 586 35.5
AL2G10210 Arabidopsis lyrata HOM05D002890 ORTHO05D005855 5.8e-60 236.5 591 36.0
CARHR046380 Cardamine hirsuta HOM05D002890 ORTHO05D005855 9.9e-60 235.7 594 34.8
PSO478G2895 Papaver somniferum HOM05D002890 ORTHO05D005855 2.2e-59 234.6 587 35.3
CsaV3_3G002680 Cucumis sativus L. HOM05D002890 ORTHO05D005855 1.1e-58 232.3 612 35.8
Sp2g00190 Schrenkiella parvula HOM05D002890 ORTHO05D005855 3.2e-58 230.7 711 32.6
Sed0017963 Sechium edule HOM05D002890 ORTHO05D005855 9.3e-58 229.2 617 34.2
DCAR_028200 Daucus carota HOM05D002890 ORTHO05D005855 1.2e-57 228.8 600 34.8
MELO3C013937.2 Cucumis melo HOM05D002890 ORTHO05D005855 2.1e-57 228.0 596 36.7
CiPaw.10G071100 Carya illinoinensis HOM05D002890 ORTHO05D005855 3.5e-57 227.3 615 34.3
Thhalv10023221m.g Eutrema salsugineum HOM05D002890 ORTHO05D005855 4.6e-57 226.9 590 34.4
AT1G64570 Arabidopsis thaliana HOM05D002890 ORTHO05D005855 1.0e-56 225.7 608 34.0
Carub.0002s0019 Capsella rubella HOM05D002890 ORTHO05D005855 3.3e-55 220.7 600 33.5
ECA236G1013 Erigeron canadensis HOM05D002890 ORTHO05D005855 3.4e-52 210.7 632 32.3
Lsat_1_v5_gn_7_16040 Lactuca sativa HOM05D002890 ORTHO05D005855 2.7e-49 201.1 526 34.8
Aa31LG2G1570 Aethionema arabicum HOM05D002890 ORTHO05D005855 1.3e-48 198.7 526 33.7
AUR62029351 Chenopodium quinoa HOM05D002890 ORTHO05D005855 8.7e-48 196.1 755 30.5
Hund21410 Selenicereus undatus HOM05D002890 ORTHO05D005855 2.0e-44 184.9 777 29.7
AUR62034232 Chenopodium quinoa HOM05D002890 ORTHO05D005855 4.5e-44 183.7 735 30.3
Ah.06g183850 Amaranthus hybridus HOM05D002890 ORTHO05D005855 1.0e-43 182.6 688 29.9
MD05G1347100 Malus domestica HOM05D002890 ORTHO05D005855 6.1e-41 173.3 328 39.9
MBI15_g03194_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D005855 7.4e-39 166.4 773 26.9
EL10Ac4g08116 Beta vulgaris HOM05D002890 ORTHO05D005855 8.2e-38 162.9 609 31.5
HPP92_025073 Vanilla planifolia HOM05D002890 ORTHO05D005855 1.8e-37 161.8 586 30.9
BcaC04g22582 Brassica carinata HOM05D002890 ORTHO05D005855 2.4e-37 161.4 464 34.1
ATR0580G054 Amborella trichopoda HOM05D002890 ORTHO05D005855 6.9e-37 159.8 813 26.7
BcaB07g31476 Brassica carinata HOM05D002890 ORTHO05D005855 6.9e-37 159.8 384 35.7
Medtr2g023290 Medicago truncatula HOM05D002975 ORTHO05D005855 1.4e-34 152.1 496 32.9
Zm00001eb310710 Zea mays HOM05D002890 ORTHO05D005855 7.9e-33 146.4 499 30.1
CDE05G0302 Ceratophyllum demersum HOM05D002890 ORTHO05D005855 2.0e-31 141.7 542 29.2
Potri.004G015034 Populus trichocarpa HOM05D002890 ORTHO05D005855 2.2e-30 138.3 239 40.2
SEGI_27437 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 2.1e-25 121.7 266 35.3
SEGI_38151 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 2.1e-25 121.7 266 35.3
Nitab4.5_0022153g0010 Nicotiana tabacum HOM05D002890 ORTHO05D005855 2.8e-22 111.3 89 61.8
Mapoly0029s0108 Marchantia polymorpha HOM05D002890 ORTHO05D005855 1.4e-21 109.0 235 33.6
Pp3c26_140 Physcomitrium patens HOM05D002890 ORTHO05D005855 5.5e-18 97.1 250 34.4
SHI01979 Sapria himalayana HOM05D002890 ORTHO05D005855 1.2e-17 95.9 83 60.2
Potri.004G015001 Populus trichocarpa HOM05D002890 ORTHO05D005855 1.6e-17 95.5 162 39.5
QL05p073148 Quercus lobata HOM05D002890 ORTHO05D005855 7.5e-15 86.7 405 27.7
BcaC04g22581 Brassica carinata HOM05D002890 ORTHO05D007906 8.2e-14 83.2 62 56.5
HPP92_025077 Vanilla planifolia HOM05D002890 ORTHO05D005855 1.1e-13 82.8 490 28.0
Nitab4.5_0000267g0080 Nicotiana tabacum HOM05D002890 ORTHO05D005855 3.8e-11 74.3 153 41.8
SHI02204 Sapria himalayana HOM05D002890 ORTHO05D005855 5.5e-10 70.5 222 31.5
CBR_g32188 Chara braunii HOM05D002890 ORTHO05D005855 6.8e-08 63.5 104 38.5


User provided reference genes

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