Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 7.9e-258 893.3 455 100.0
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 2.8e-178 629.0 455 74.3
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 4.0e-169 598.6 432 74.5
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 4.2e-166 588.6 428 73.4
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.9e-163 579.7 437 71.4
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 5.9e-160 568.2 458 68.6
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 1.1e-158 563.9 434 69.4
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 7.2e-158 561.2 435 69.4
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 1.3e-156 557.0 400 72.5
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 8.7e-156 554.3 432 68.1
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 5.7e-155 551.6 433 66.7
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 7.4e-155 551.2 426 68.8
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 1.7e-154 550.1 432 69.2
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.2e-154 549.7 426 68.5
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 3.7e-154 548.9 426 68.1
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 1.1e-153 547.4 444 67.1
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 2.4e-153 546.2 416 68.8
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 3.1e-153 545.8 432 68.8
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 5.9e-152 541.6 432 68.3
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 5.9e-152 541.6 420 68.8
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 5.9e-152 541.6 443 67.5
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 7.7e-152 541.2 441 66.0
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 1.3e-151 540.4 398 71.4
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 1.7e-151 540.0 431 66.1
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 2.9e-151 539.3 421 69.1
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 1.1e-150 537.3 414 68.8
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.4e-150 537.0 424 67.7
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.4e-150 537.0 424 67.2
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 1.4e-150 537.0 439 66.7
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 1.9e-150 536.6 407 69.5
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 2.5e-150 536.2 425 66.8
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 4.2e-150 535.4 444 66.0
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 5.5e-150 535.0 397 70.0
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 2.1e-149 533.1 402 70.4
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 4.7e-149 531.9 426 67.1
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 1.0e-148 530.8 426 66.0
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 1.4e-148 530.4 387 72.1
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 1.8e-148 530.0 421 66.7
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.8e-148 530.0 405 68.9
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 2.3e-148 529.6 398 70.1
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 3.0e-148 529.3 414 68.8
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 3.0e-148 529.3 450 64.0
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 3.9e-148 528.9 426 66.4
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 6.7e-148 528.1 406 69.0
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 6.7e-148 528.1 404 68.6
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 8.8e-148 527.7 406 68.2
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 2.0e-147 526.6 443 64.6
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 4.4e-147 525.4 430 65.6
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 4.4e-147 525.4 432 66.2
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 5.7e-147 525.0 423 67.4
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 2.2e-146 523.1 396 69.2
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 3.7e-146 522.3 410 68.8
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 6.3e-146 521.5 413 67.3
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 6.3e-146 521.5 400 68.5
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 8.2e-146 521.2 389 70.2
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 1.8e-145 520.0 446 64.6
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 4.1e-145 518.8 415 67.5
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 1.5e-144 516.9 450 62.4
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 1.5e-144 516.9 407 66.8
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 5.9e-144 515.0 379 71.0
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.0e-143 514.2 399 68.2
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.6e-141 506.9 409 64.1
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 6.1e-141 505.0 428 62.9
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 2.8e-138 496.1 432 61.1
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 2.8e-138 496.1 429 64.3
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 2.4e-137 493.0 414 64.3
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 3.8e-135 485.7 421 59.9
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 2.5e-134 483.0 389 66.3
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 3.6e-133 479.2 405 60.7
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.3e-130 470.7 432 63.0
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.7e-130 470.3 382 64.4
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.7e-130 470.3 382 64.4
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 2.3e-124 449.9 439 57.6
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 1.4e-121 440.7 406 59.9
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 1.4e-113 414.1 399 59.4
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 1.3e-111 407.5 414 54.6
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.2e-106 390.2 382 55.8
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 1.2e-96 357.8 310 62.6
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.2e-96 357.8 306 63.4
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 8.6e-95 351.7 287 65.9
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 4.9e-90 335.9 337 57.9
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 8.3e-90 335.1 295 60.3
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.3e-82 311.2 226 68.6
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 6.9e-76 288.9 284 57.4
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 3.9e-71 273.1 387 42.9
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 9.0e-68 261.9 209 67.0
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 1.8e-60 237.7 259 53.3
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 4.6e-48 196.4 179 60.9
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 3.9e-47 193.4 139 69.8
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 8.7e-47 192.2 128 74.2
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 3.2e-09 67.4 77 50.6


User provided reference genes

Program Settings