Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G10731 Striga asiatica HOM05D006388 ORTHO05D008026 1.8e-276 955.3 477 100.0
SalBow5G5586 Salvia bowleyana HOM05D006388 ORTHO05D008026 9.8e-166 587.4 471 66.0
Oeu063709.3 Olea europaea HOM05D006388 ORTHO05D008026 3.0e-146 522.7 474 61.2
Nitab4.5_0007717g0060 Nicotiana tabacum HOM05D006388 ORTHO05D008026 2.2e-125 453.4 473 54.5
PGSC0003DMG400015280 Solanum tuberosum HOM05D006388 ORTHO05D008026 8.4e-125 451.4 483 53.8
Nitab4.5_0001495g0050 Nicotiana tabacum HOM05D006388 ORTHO05D008026 9.3e-124 448.0 470 53.6
Sopen03g029690 Solanum pennellii HOM05D006388 ORTHO05D008026 4.6e-123 445.7 491 54.2
Dinv03508 Davidia involucrata HOM05D006388 ORTHO05D008026 2.6e-118 429.9 496 51.8
Cc00_g12620 Coffea canephora HOM05D006388 ORTHO05D008026 3.4e-118 429.5 498 48.2
TAR622G0711 Trochodendron aralioides HOM05D006388 ORTHO05D008026 6.4e-117 425.2 482 51.2
CAN.G861.30 Capsicum annuum HOM05D006388 ORTHO05D008026 1.1e-116 424.5 471 49.5
Prupe.5G245000 Prunus persica HOM05D006388 ORTHO05D008026 1.0e-114 417.9 503 50.3
FAN08G3112 Fragaria x ananassa HOM05D006388 ORTHO05D008026 4.3e-113 412.5 463 50.5
FAN18G2055 Fragaria x ananassa HOM05D006388 ORTHO05D008026 5.6e-113 412.1 466 50.9
FvH4_5g18560 Fragaria vesca HOM05D006388 ORTHO05D008026 7.4e-113 411.8 466 51.1
Lj5A168G91 Lonicera japonica HOM05D006388 ORTHO05D008026 7.4e-113 411.8 520 50.0
CiPaw.15G107500 Carya illinoinensis HOM05D006388 ORTHO05D008026 9.6e-113 411.4 485 50.7
FAN13G2679 Fragaria x ananassa HOM05D006388 ORTHO05D008026 9.6e-113 411.4 466 50.9
Cfa017806 Carpinus fangiana HOM05D006388 ORTHO05D008026 3.6e-112 409.5 484 50.8
Migut.O00278 Erythranthe guttata HOM05D006388 ORTHO05D008026 1.4e-111 407.5 481 51.6
Psat1g118840 Pisum sativum HOM05D006388 ORTHO05D008026 2.4e-111 406.8 510 46.7
TPR.G31361 Trifolium pratense HOM05D006388 ORTHO05D008026 4.0e-111 406.0 512 47.7
RcHm_v2.0_Chr7g0176951 Rosa chinensis HOM05D006388 ORTHO05D008026 6.9e-111 405.2 474 50.4
Lj2g0005711 Lotus japonicus HOM05D006388 ORTHO05D008026 9.0e-111 404.8 521 46.6
TWI15G1133 Tripterygium wilfordii HOM05D006388 ORTHO05D008026 1.2e-110 404.4 476 49.4
MD14G1246700 Malus domestica HOM05D006388 ORTHO05D008026 2.0e-110 403.7 497 48.1
DCAR_014753 Daucus carota HOM05D001996 ORTHO05D002072 7.6e-110 401.7 441 52.4
Atru.chr6.990 Acer truncatum HOM05D006388 ORTHO05D008026 2.2e-109 400.2 469 51.2
Glyma.16G210900 Glycine max HOM05D006388 ORTHO05D008026 4.9e-109 399.1 525 46.5
COL.COLO4_30052 Corchorus olitorius HOM05D006388 ORTHO05D008026 8.4e-109 398.3 475 51.4
Phvul.004G137100 Phaseolus vulgaris HOM05D006388 ORTHO05D008026 8.4e-109 398.3 482 48.8
ClCG10G003610 Citrullus lanatus HOM05D006388 ORTHO05D008026 2.4e-108 396.7 475 50.1
Medtr6g068920 Medicago truncatula HOM05D006388 ORTHO05D008026 1.6e-107 394.0 526 46.4
Manes.02G226400 Manihot esculenta HOM05D006388 ORTHO05D008026 2.1e-107 393.7 475 49.9
MBI03_g13439_MAGBIO Magnolia biondii HOM05D006388 ORTHO05D008026 2.7e-107 393.3 487 48.9
Lalb_Chr03g0034281 Lupinus albus HOM05D006388 ORTHO05D008026 7.9e-107 391.7 528 46.0
CANSAT80G2370 Cannabis sativa HOM05D006388 ORTHO05D008026 1.3e-106 391.0 472 48.5
PSO063G3611 Papaver somniferum HOM05D006388 ORTHO05D008026 1.3e-106 391.0 496 47.2
EL10Ac8g19473 Beta vulgaris HOM05D006388 ORTHO05D008026 1.8e-106 390.6 479 47.2
Gorai.004G262300 Gossypium raimondii HOM05D006388 ORTHO05D008026 2.3e-106 390.2 502 49.2
arahy.Tifrunner.gnm1.ann1.V0741V Arachis hypogaea HOM05D006388 ORTHO05D008026 5.1e-106 389.0 514 46.3
Gohir.A08G225400 Gossypium hirsutum HOM05D006388 ORTHO05D008026 6.7e-106 388.7 502 49.2
Thecc.05G197200 Theobroma cacao HOM05D006388 ORTHO05D008026 1.1e-105 387.9 482 50.4
Potri.004G067200 Populus trichocarpa HOM05D006388 ORTHO05D008026 1.5e-105 387.5 505 48.7
arahy.Tifrunner.gnm1.ann1.586MWM Arachis hypogaea HOM05D006388 ORTHO05D008026 1.9e-105 387.1 509 46.2
VMungo0464G0944 Vigna mungo HOM05D006388 ORTHO05D008026 1.9e-105 387.1 519 45.9
Gohir.D08G245800 Gossypium hirsutum HOM05D006388 ORTHO05D008026 4.3e-105 386.0 496 48.8
Cpa.g.sc168.3 Carica papaya HOM05D006388 ORTHO05D008026 7.4e-105 385.2 465 48.6
Sed0000986 Sechium edule HOM05D006388 ORTHO05D008026 1.6e-104 384.0 470 49.4
MELO3C014032.2 Cucumis melo HOM05D006388 ORTHO05D008026 3.7e-104 382.9 477 49.7
Duzib128G0602 Durio zibethinus HOM05D006388 ORTHO05D008026 4.8e-104 382.5 488 48.6
Solyc03g019930.4 Solanum lycopersicum HOM05D006388 ORTHO05D008026 4.8e-104 382.5 475 48.2
CsaV3_3G003610 Cucumis sativus L. HOM05D006388 ORTHO05D008026 6.2e-104 382.1 474 48.9
PGR044G0861 Punica granatum HOM05D006388 ORTHO05D008026 1.2e-102 377.9 490 48.0
Nn4g26682 Nelumbo nucifera HOM05D006388 ORTHO05D008026 2.6e-102 376.7 476 49.2
ECA236G2607 Erigeron canadensis HOM05D006388 ORTHO05D008026 3.4e-102 376.3 485 47.2
Sabra04G0045000 Salix brachista HOM05D006388 ORTHO05D008026 1.3e-101 374.4 525 45.9
Sc10g0008630 Simmondsia chinensis HOM05D006388 ORTHO05D008026 1.3e-101 374.4 476 46.8
HanXRQChr05g0141681 Helianthus annuus HOM05D006388 ORTHO05D008026 1.7e-101 374.0 476 45.4
Rhsim08G0125300 Rhododendron simsii HOM05D006388 ORTHO05D008026 4.9e-101 372.5 564 43.3
ClCG00G000350 Citrullus lanatus HOM05D006388 ORTHO05D008026 6.5e-101 372.1 498 46.8
Ah.14g085810 Amaranthus hybridus HOM05D006388 ORTHO05D008026 8.4e-101 371.7 471 45.0
Haze_18407 Corylus avellana HOM05D006388 ORTHO05D008026 1.4e-100 370.9 480 48.3
AUR62040788 Chenopodium quinoa HOM05D006388 ORTHO05D008026 3.2e-100 369.8 422 49.1
Ca_25279_v3 Cicer arietinum L. HOM05D006388 ORTHO05D008026 4.2e-100 369.4 503 45.1
Lsat_1_v5_gn_8_64640 Lactuca sativa HOM05D006388 ORTHO05D008026 5.5e-100 369.0 478 47.3
Eucgr.K02329 Eucalyptus grandis HOM05D006388 ORTHO05D008026 7.1e-100 368.6 483 47.4
CDE04G0152 Ceratophyllum demersum HOM05D006388 ORTHO05D008026 1.1e-97 361.3 501 42.9
Aqoxy3G04328 Aquilegia oxysepala HOM05D006388 ORTHO05D008026 1.9e-97 360.5 476 45.0
Carub.0002s2012 Capsella rubella HOM05D006388 ORTHO05D008026 8.2e-96 355.1 467 46.0
Aa31LG4G3650 Aethionema arabicum HOM05D006388 ORTHO05D008026 1.1e-95 354.8 470 46.0
CARHR066430 Cardamine hirsuta HOM05D006388 ORTHO05D008026 1.8e-95 354.0 473 45.0
ATR0124G024 Amborella trichopoda HOM05D006388 ORTHO05D008026 2.4e-95 353.6 501 42.5
Thhalv10018586m.g Eutrema salsugineum HOM05D006388 ORTHO05D008026 4.1e-95 352.8 476 45.0
BraA02t06912Z Brassica rapa HOM05D006388 ORTHO05D008026 5.3e-95 352.4 468 44.4
unitig_749.g14324 Utricularia gibba HOM05D006388 ORTHO05D008026 2.0e-94 350.5 472 45.8
Sp5g28310 Schrenkiella parvula HOM05D006388 ORTHO05D008026 3.8e-93 346.3 470 45.1
A02p18710 Brassica napus HOM05D006388 ORTHO05D008026 1.1e-92 344.7 469 44.3
THA.LOC104813931 Tarenaya hassleriana HOM05D006388 ORTHO05D008026 4.2e-92 342.8 470 46.2
C02p31040 Brassica napus HOM05D006388 ORTHO05D008026 2.1e-91 340.5 469 43.9
BolC2t09150H Brassica oleracea HOM05D006388 ORTHO05D008026 1.0e-90 338.2 467 43.5
HPP92_007318 Vanilla planifolia HOM05D006388 ORTHO05D008026 1.0e-90 338.2 460 43.0
AT1G73380 Arabidopsis thaliana HOM05D006388 ORTHO05D008026 1.3e-90 337.8 477 44.7
AL2G33160 Arabidopsis lyrata HOM05D006388 ORTHO05D008026 3.9e-90 336.3 476 43.7
TPR.G3132 Trifolium pratense HOM05D006388 ORTHO05D008026 8.7e-90 335.1 437 46.2
GSVIVG01024248001 Vitis vinifera HOM05D006388 ORTHO05D008026 3.2e-84 316.6 464 44.6
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 9.1e-79 298.5 406 48.5
Zm00001eb068340 Zea mays HOM05D006388 ORTHO05D008026 1.5e-78 297.7 476 41.8
Ciclev10020647m.g Citrus clementina HOM05D006388 ORTHO05D008026 3.4e-78 296.6 396 45.2
vmacro17751 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 1.4e-76 291.2 385 44.2
Actinidia34678 Actinidia chinensis HOM05D006388 ORTHO05D008026 7.2e-76 288.9 350 48.6
SEGI_28863 Sequoiadendron giganteum HOM05D006388 ORTHO05D008026 5.0e-69 266.2 471 38.6
Hund22363 Selenicereus undatus HOM05D006388 ORTHO05D008026 3.2e-68 263.5 408 40.9
Peaxi162Scf00171g00011 Petunia axillaris HOM05D006388 ORTHO05D008026 4.4e-65 253.1 203 65.0
Os10g0489800 Oryza sativa ssp. japonica HOM05D006388 ORTHO05D008026 4.5e-62 243.0 329 44.7
Glyma.09G161700 Glycine max HOM05D006388 ORTHO05D008026 3.2e-60 236.9 174 67.8
ClCG00G006010 Citrullus lanatus HOM05D006388 ORTHO05D008026 9.4e-60 235.3 350 43.7
Mapoly0114s0003 Marchantia polymorpha HOM05D006388 ORTHO05D008026 6.1e-59 232.6 508 32.7
Duzib128G0966 Durio zibethinus HOM05D006388 ORTHO05D008026 4.0e-58 229.9 184 65.2
TPR.G27930 Trifolium pratense HOM05D006388 ORTHO05D008026 8.3e-56 222.2 213 57.3
AagrBONN_evm.TU.Sc2ySwM_344.3994 Anthoceros agrestis HOM05D006388 ORTHO05D008026 5.7e-49 199.5 548 29.0
Pp3c1_7520 Physcomitrium patens HOM05D006388 ORTHO05D008026 5.0e-45 186.4 510 30.8
Gohir.A08G079000 Gossypium hirsutum HOM05D006388 ORTHO05D008026 1.9e-44 184.5 304 43.8
AUR62038569 Chenopodium quinoa HOM05D006388 ORTHO05D008026 4.3e-44 183.3 280 40.0
SMO169G0166 Selaginella moellendorffii HOM05D006388 ORTHO05D008026 4.7e-43 179.9 422 29.6
CSS0002556 Camellia sinensis var. sinensis HOM05D006388 ORTHO05D008026 1.2e-41 175.3 122 72.1
Duzib128G1156 Durio zibethinus HOM05D006388 ORTHO05D008026 3.7e-40 170.2 146 61.6
FAN04G1542 Fragaria x ananassa HOM05D006388 ORTHO05D008026 1.8e-39 167.9 194 46.4
ClCG00G000360 Citrullus lanatus HOM05D006388 ORTHO05D008026 8.6e-37 159.1 122 68.0
CBR_g36351 Chara braunii HOM05D006388 ORTHO05D008026 3.2e-31 140.6 193 36.8
TPR.G16379 Trifolium pratense HOM05D006388 ORTHO05D008026 1.7e-24 118.2 112 55.4
vmacro17752 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 1.1e-20 105.5 70 72.9
Glyma.09G161751 Glycine max HOM05D006388 ORTHO05D008026 3.3e-20 104.0 106 53.8
TPR.G31360 Trifolium pratense HOM05D006388 ORTHO05D008026 2.1e-19 101.3 70 70.0
MapolyY_B0043 Marchantia polymorpha HOM05D006388 ORTHO05D008026 2.1e-14 84.7 129 39.5
TPR.G46 Trifolium pratense HOM05D006388 ORTHO05D008026 4.3e-12 77.0 112 42.0
Actinidia34679 Actinidia chinensis HOM05D006388 ORTHO05D008026 1.1e-10 72.4 48 72.9
Zm00001eb050690 Zea mays HOM05D006388 ORTHO05D008026 1.8e-10 71.6 48 72.9
PGR044G2638 Punica granatum HOM05D006388 ORTHO05D008026 7.6e-09 66.2 99 45.5
Hma1.2p1_0800F.1_g220210 Hydrangea macrophylla HOM05D006388 ORTHO05D008026 4.9e-08 63.5 54 61.1
Zm00001eb135490 Zea mays HOM05D006388 ORTHO05D008026 8.4e-08 62.8 90 44.4


User provided reference genes

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