Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 1.1e-89 333.2 164 100.0
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 1.2e-35 153.7 113 71.7
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 9.8e-33 144.1 119 69.7
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 8.3e-32 141.0 116 68.1
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 1.2e-27 127.1 112 66.1
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 4.7e-27 125.2 112 67.9
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.8e-26 123.2 111 64.9
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 3.1e-26 122.5 111 64.9
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 6.8e-26 121.3 112 65.2
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 1.2e-25 120.6 112 63.4
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 2.6e-25 119.4 79 72.2
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.6e-25 119.4 79 72.2
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 4.4e-25 118.6 131 51.9
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 4.4e-25 118.6 99 63.6
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 1.3e-24 117.1 120 57.5
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 1.3e-24 117.1 120 55.8
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 2.2e-24 116.3 86 67.4
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 2.9e-24 115.9 107 58.9
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 3.7e-24 115.5 79 69.6
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 3.7e-24 115.5 79 69.6
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 3.7e-24 115.5 79 69.6
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 3.7e-24 115.5 108 62.0
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 4.9e-24 115.2 97 66.0
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 6.4e-24 114.8 117 59.0
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 8.3e-24 114.4 113 61.1
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 1.4e-23 113.6 79 70.9
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 1.4e-23 113.6 97 67.0
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 2.4e-23 112.8 97 58.8
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 2.4e-23 112.8 97 58.8
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 3.2e-23 112.5 87 69.0
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 3.2e-23 112.5 80 72.5
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 5.4e-23 111.7 79 69.6
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 7.1e-23 111.3 79 72.2
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 7.1e-23 111.3 100 60.0
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 9.2e-23 110.9 104 58.7
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 9.2e-23 110.9 72 77.8
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 2.1e-22 109.8 79 69.6
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 2.7e-22 109.4 80 68.8
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 4.6e-22 108.6 78 69.2
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 6.0e-22 108.2 79 65.8
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 6.0e-22 108.2 95 58.9
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 6.0e-22 108.2 89 64.0
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 6.0e-22 108.2 97 62.9
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 6.0e-22 108.2 117 53.0
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 1.0e-21 107.5 85 64.7
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 1.0e-21 107.5 96 63.5
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 1.0e-21 107.5 79 68.4
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 1.3e-21 107.1 108 55.6
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.7e-21 106.7 82 64.6
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 3.0e-21 105.9 99 63.6
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 3.9e-21 105.5 79 67.1
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 5.1e-21 105.1 79 69.6
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 6.6e-21 104.8 79 64.6
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 8.6e-21 104.4 79 64.6
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 8.6e-21 104.4 101 60.4
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 1.1e-20 104.0 73 71.2
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 2.5e-20 102.8 72 72.2
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 2.5e-20 102.8 72 72.2
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 2.5e-20 102.8 72 72.2
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 2.5e-20 102.8 111 54.1
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 2.5e-20 102.8 86 61.6
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 2.5e-20 102.8 79 64.6
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 2.5e-20 102.8 79 64.6
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 2.5e-20 102.8 110 52.7
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 2.5e-20 102.8 80 66.2
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 2.5e-20 102.8 84 63.1
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 3.3e-20 102.4 70 71.4
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 3.3e-20 102.4 124 47.6
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 4.3e-20 102.1 121 49.6
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 5.6e-20 101.7 79 64.6
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 7.3e-20 101.3 123 52.0
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 9.5e-20 100.9 71 71.8
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 9.5e-20 100.9 71 73.2
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 9.5e-20 100.9 95 62.1
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 9.5e-20 100.9 71 73.2
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 9.5e-20 100.9 71 73.2
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 9.5e-20 100.9 79 64.6
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 9.5e-20 100.9 79 62.0
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 1.2e-19 100.5 71 73.2
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.2e-19 100.5 110 53.6
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 1.2e-19 100.5 104 59.6
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 1.2e-19 100.5 121 48.8
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 1.2e-19 100.5 82 63.4
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 2.1e-19 99.8 95 61.1
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 2.1e-19 99.8 112 52.7
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 2.8e-19 99.4 71 70.4
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 4.7e-19 98.6 71 73.2
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 6.2e-19 98.2 79 60.8
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 6.2e-19 98.2 112 50.0
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 6.2e-19 98.2 79 62.0
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 6.2e-19 98.2 79 68.4
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 8.1e-19 97.8 77 66.2
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 2.4e-18 96.3 73 63.0
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 4.0e-18 95.5 72 69.4
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 5.2e-18 95.1 91 58.2
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 8.9e-18 94.4 92 54.3
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 8.9e-18 94.4 83 61.4
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 1.2e-17 94.0 72 66.7
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 2.0e-17 93.2 88 55.7
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 1.3e-16 90.5 73 56.2
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 6.4e-16 88.2 108 49.1
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 8.4e-16 87.8 79 60.8
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 2.4e-15 86.3 62 67.7
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 3.2e-15 85.9 128 43.8
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 1.2e-14 84.0 60 70.0
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 1.2e-14 84.0 63 66.7
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 1.2e-14 84.0 63 66.7
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 1.2e-14 84.0 79 51.9
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 4.6e-14 82.0 80 55.0
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 4.6e-14 82.0 100 47.0
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 6.0e-14 81.6 69 60.9
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 1.3e-13 80.5 61 63.9
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 1.2e-11 73.9 70 48.6
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 9.0e-10 67.8 58 56.9
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 7.6e-09 64.7 52 63.5
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 9.9e-09 64.3 70 45.7
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 2.2e-08 63.2 80 43.8


User provided reference genes

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