Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 1.6e-163 579.3 288 100.0
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 6.3e-75 285.0 254 61.0
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 1.5e-68 263.8 264 55.7
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 2.6e-68 263.1 264 58.0
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 1.5e-65 253.8 247 55.1
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 2.6e-65 253.1 324 49.4
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 1.7e-64 250.4 253 56.5
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 3.8e-64 249.2 252 56.0
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 4.2e-63 245.7 265 53.6
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 7.9e-62 241.5 241 56.0
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 1.0e-61 241.1 267 50.9
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 3.0e-61 239.6 251 55.0
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 2.6e-60 236.5 252 54.0
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 3.3e-60 236.1 266 50.8
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 3.3e-60 236.1 241 54.8
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 5.7e-60 235.3 240 54.2
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 7.4e-60 235.0 278 49.3
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 7.4e-60 235.0 241 54.8
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 7.4e-60 235.0 245 55.1
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 1.3e-59 234.2 252 53.2
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.3e-59 234.2 245 54.3
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 2.2e-59 233.4 281 49.5
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 2.2e-59 233.4 239 52.7
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 2.8e-59 233.0 245 55.1
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 4.8e-59 232.3 272 50.0
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 6.3e-59 231.9 271 50.9
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 6.3e-59 231.9 253 52.2
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 8.2e-59 231.5 252 52.8
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 1.1e-58 231.1 256 50.0
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 1.4e-58 230.7 284 49.3
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 1.4e-58 230.7 240 53.8
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 1.8e-58 230.3 281 49.5
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 1.8e-58 230.3 242 54.1
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 4.1e-58 229.2 284 48.6
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 1.2e-57 227.6 274 48.9
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 2.6e-57 226.5 241 52.7
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 3.5e-57 226.1 281 48.0
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 4.5e-57 225.7 241 53.1
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 1.0e-56 224.6 275 48.0
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 1.3e-56 224.2 275 49.1
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 1.7e-56 223.8 242 53.3
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 3.8e-56 222.6 289 47.1
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 6.5e-56 221.9 241 51.0
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 6.5e-56 221.9 253 49.8
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 1.9e-55 220.3 265 51.3
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 3.2e-55 219.5 285 47.4
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 5.5e-55 218.8 242 52.1
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 1.2e-54 217.6 241 51.5
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 2.7e-54 216.5 243 50.6
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 2.7e-54 216.5 241 50.6
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 1.4e-53 214.2 136 72.8
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 3.0e-53 213.0 260 48.1
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 4.0e-53 212.6 232 51.3
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 5.2e-53 212.2 240 49.6
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 6.7e-53 211.8 237 50.2
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 6.7e-53 211.8 238 49.2
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 8.8e-53 211.5 254 48.4
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 8.8e-53 211.5 240 49.6
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 8.8e-53 211.5 329 42.9
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.5e-52 210.7 228 50.4
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 1.5e-52 210.7 228 51.8
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 2.0e-52 210.3 240 49.6
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 2.0e-52 210.3 256 47.3
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 2.2e-51 206.8 237 48.9
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.2e-51 206.8 237 48.9
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.2e-51 206.8 237 48.9
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 6.3e-51 205.3 139 70.5
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.1e-50 204.5 237 48.5
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 4.1e-50 202.6 222 50.0
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.2e-49 201.1 237 48.5
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 2.7e-49 199.9 244 46.7
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 5.9e-49 198.7 269 42.8
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 5.0e-48 195.7 258 46.5
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 8.5e-48 194.9 230 48.7
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 2.5e-47 193.4 251 45.4
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 7.2e-47 191.8 230 48.3
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 2.7e-46 189.9 230 48.3
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 3.6e-46 189.5 252 46.4
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 8.0e-46 188.3 278 42.1
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 3.0e-45 186.4 252 43.3
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 4.0e-45 186.0 247 43.7
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 1.2e-44 184.5 279 40.5
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 3.4e-44 183.0 239 44.4
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 9.8e-44 181.4 260 41.9
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 1.7e-43 180.6 239 44.4
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 1.8e-42 177.2 237 44.7
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 7.0e-42 175.3 241 44.0
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 9.1e-42 174.9 237 44.3
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 9.1e-42 174.9 237 44.3
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 1.7e-40 170.6 219 45.2
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 6.8e-37 158.7 99 73.7
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 9.8e-36 154.8 99 69.7
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 5.6e-31 139.0 243 40.7
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 1.6e-30 137.5 130 54.6
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 8.9e-29 131.7 139 47.5
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 1.7e-27 127.5 139 46.8
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 2.8e-22 110.2 134 43.3
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 4.7e-22 109.4 202 39.1
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 2.0e-20 104.0 63 73.0
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 4.4e-20 102.8 64 68.8
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 1.4e-18 97.8 172 41.3
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 2.7e-17 93.6 156 41.0
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 1.2e-12 78.2 165 32.1
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 5.8e-12 75.9 178 33.7
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 7.1e-10 68.9 63 57.1
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.0e-08 63.5 56 58.9
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 5.1e-08 62.8 139 35.3
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 5.6e-07 59.3 57 54.4
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 3.6e-06 56.6 102 31.4
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 8.1e-06 55.5 101 38.6


User provided reference genes

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