Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 2.5e-245 851.7 436 100.0
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 2.3e-153 546.2 348 83.0
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 2.4e-147 526.2 348 78.7
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 4.2e-147 525.4 348 78.4
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 7.1e-147 524.6 348 78.4
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 4.6e-146 521.9 348 78.4
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 6.0e-146 521.5 348 78.4
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 7.9e-146 521.2 348 78.2
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 1.1e-144 517.3 348 77.6
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 1.6e-143 513.5 349 77.4
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 1.6e-143 513.5 349 78.5
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 2.1e-143 513.1 348 77.6
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 2.8e-143 512.7 348 77.6
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 1.5e-141 506.9 347 77.5
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 1.5e-141 506.9 349 77.9
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 3.4e-141 505.8 348 76.1
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 5.8e-141 505.0 348 76.7
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 2.2e-140 503.1 348 75.9
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 3.8e-140 502.3 349 77.1
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 1.4e-139 500.4 346 75.1
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 3.2e-139 499.2 348 75.0
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 9.3e-139 497.7 348 75.0
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 9.3e-139 497.7 348 74.4
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 2.7e-138 496.1 347 76.1
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 3.5e-138 495.7 348 75.3
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 3.5e-138 495.7 347 75.5
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 4.6e-138 495.4 348 74.1
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 4.6e-138 495.4 348 74.4
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 1.3e-137 493.8 348 76.7
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.3e-137 493.8 347 74.1
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 1.8e-137 493.4 348 74.1
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 1.8e-137 493.4 347 74.1
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 2.3e-137 493.0 347 75.2
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 3.0e-137 492.7 346 73.4
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 1.5e-136 490.3 348 73.3
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 3.3e-136 489.2 347 73.5
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 4.3e-136 488.8 348 74.1
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 5.7e-136 488.4 348 75.6
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 9.6e-136 487.6 346 74.3
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 2.8e-135 486.1 348 72.7
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 8.2e-135 484.6 347 73.2
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 8.2e-135 484.6 349 73.9
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 1.4e-134 483.8 361 72.3
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 1.8e-134 483.4 348 72.1
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 2.4e-134 483.0 349 73.9
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 4.0e-134 482.3 347 72.9
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 5.3e-134 481.9 348 71.6
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 9.0e-134 481.1 350 74.6
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 1.2e-133 480.7 348 71.8
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 2.0e-133 479.9 349 73.6
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 3.4e-133 479.2 348 71.3
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 3.4e-133 479.2 348 73.9
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 4.5e-133 478.8 349 73.9
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 1.7e-132 476.9 347 72.3
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 2.9e-132 476.1 348 73.0
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 8.4e-132 474.6 351 73.5
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.1e-131 474.2 347 72.3
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 1.1e-131 474.2 348 71.6
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 5.5e-131 471.9 351 72.9
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 5.5e-131 471.9 348 73.6
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 7.1e-131 471.5 349 72.5
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 1.2e-130 470.7 348 72.4
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 2.1e-130 469.9 350 71.7
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 2.1e-130 469.9 349 73.4
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 3.5e-130 469.2 348 71.6
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 7.9e-130 468.0 348 71.6
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.8e-129 466.8 347 71.5
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 5.1e-129 465.3 349 69.1
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 6.7e-129 464.9 349 72.5
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 6.7e-129 464.9 348 69.5
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 1.1e-128 464.2 348 69.8
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 1.1e-128 464.2 380 67.9
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 2.5e-128 463.0 380 67.9
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 5.7e-128 461.8 348 69.0
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 5.7e-128 461.8 348 69.0
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 5.7e-128 461.8 348 69.0
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 5.7e-128 461.8 374 67.4
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 7.4e-128 461.5 348 69.0
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 1.3e-127 460.7 349 69.6
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 2.2e-127 459.9 348 68.7
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 3.7e-127 459.1 347 71.2
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 4.8e-127 458.8 347 69.2
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 6.3e-127 458.4 349 68.8
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 1.6e-122 443.7 348 69.5
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 2.5e-120 436.4 351 69.2
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 2.5e-120 436.4 347 67.7
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 5.7e-120 435.3 316 74.1
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 3.2e-115 419.5 287 76.3
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 3.0e-113 412.9 298 74.5
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 5.5e-107 392.1 348 58.3
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 2.3e-105 386.7 357 61.3
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 5.7e-104 382.1 264 74.6
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 4.8e-103 379.0 348 56.3
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 3.5e-101 372.9 239 82.0
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 2.7e-98 363.2 348 56.9
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 8.0e-82 308.5 258 66.3
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 4.1e-78 296.2 240 64.6
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 2.6e-72 276.9 363 46.3
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 3.4e-72 276.6 290 55.5
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 6.0e-69 265.8 347 46.7
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 5.0e-68 262.7 248 60.9
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 1.5e-67 261.2 182 76.4
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 3.7e-63 246.5 305 49.5
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.4e-62 244.6 348 44.5
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 8.6e-60 235.3 193 65.8
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 3.3e-59 233.4 168 71.4
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 9.5e-59 231.9 349 45.0
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 8.6e-52 208.8 202 57.9
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 3.6e-50 203.4 184 58.7
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 1.5e-48 198.0 144 70.1
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.7e-45 187.2 174 60.3
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 4.4e-40 169.9 266 42.1
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 6.4e-39 166.0 135 66.7
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.3e-34 151.8 108 75.0
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 3.1e-25 120.6 133 50.4
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 2.0e-24 117.9 66 89.4
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.6e-21 108.2 114 57.9
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 9.6e-19 99.0 74 71.6
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.6e-16 90.9 89 57.3
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 2.7e-13 80.9 43 93.0
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 1.1e-09 68.9 63 61.9


User provided reference genes

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