Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold258G45776 Striga asiatica HOM05D012189 ORTHO05D000277 8.5e-105 383.6 190 100.0
SGA_v2.0_scaffold3G01632 Striga asiatica HOM05D009666 ORTHO05D000277 2.8e-47 192.6 189 56.1
SGA_v2.0_scaffold235G43663 Striga asiatica HOM05D009666 ORTHO05D000277 4.5e-45 185.3 184 56.5
SGA_v2.0_scaffold113G31702 Striga asiatica HOM05D012189 ORTHO05D000277 1.9e-43 179.9 182 53.3
SGA_v2.0_scaffold103G30052 Striga asiatica HOM05D000034 ORTHO05D000277 1.6e-42 176.8 171 53.8
SGA_v2.0_scaffold174G39206 Striga asiatica HOM05D012189 ORTHO05D000277 2.4e-38 162.9 135 65.2
SGA_v2.0_scaffold221G42759 Striga asiatica HOM05D009666 ORTHO05D000277 3.4e-37 159.1 186 43.5
SGA_v2.0_scaffold3145G54282 Striga asiatica HOM05D009666 ORTHO05D000277 1.0e-36 157.5 186 43.0
SGA_v2.0_scaffold387G50510 Striga asiatica HOM05D012189 ORTHO05D000277 7.4e-32 141.4 120 65.0
SGA_v2.0_scaffold73G24466 Striga asiatica HOM05D009666 ORTHO05D000277 4.1e-30 135.6 179 40.2
SGA_v2.0_scaffold409G51096 Striga asiatica HOM05D009666 ORTHO05D000277 1.8e-25 120.2 105 59.0
SGA_v2.0_scaffold105G30384 Striga asiatica HOM05D000034 ORTHO05D000277 1.1e-24 117.5 134 50.0
SGA_v2.0_scaffold464G52000 Striga asiatica HOM05D000034 ORTHO05D000037 3.3e-24 115.9 182 39.6
SGA_v2.0_scaffold6G03411 Striga asiatica HOM05D000034 ORTHO05D000277 3.1e-22 109.4 147 43.5
SGA_v2.0_scaffold26G11283 Striga asiatica HOM05D009666 ORTHO05D000277 1.5e-21 107.1 164 40.2
SGA_v2.0_scaffold265G46065 Striga asiatica HOM05D012189 ORTHO05D000277 5.5e-19 98.6 113 42.5
SGA_v2.0_scaffold123G33397 Striga asiatica HOM05D000034 ORTHO05D000277 1.2e-18 97.4 183 32.2
SGA_v2.0_scaffold19G08868 Striga asiatica HOM05D009707 ORTHO05D010215 3.6e-18 95.9 187 33.2
Migut.F01547 Erythranthe guttata HOM05D000034 ORTHO05D000277 1.0e-17 94.4 192 33.9
SGA_v2.0_scaffold68G22817 Striga asiatica HOM05D009707 ORTHO05D010215 5.1e-17 92.0 169 31.4
SGA_v2.0_scaffold102G29874 Striga asiatica HOM05D009707 ORTHO05D000277 2.0e-16 90.1 178 28.1
SGA_v2.0_scaffold16G07755 Striga asiatica HOM05D009666 ORTHO05D011401 2.0e-16 90.1 116 50.9
SGA_v2.0_scaffold10G05247 Striga asiatica HOM05D000034 ORTHO05D000277 2.8e-15 86.3 127 44.1
SGA_v2.0_scaffold486G52372 Striga asiatica HOM05D009666 ORTHO05D000277 3.7e-15 85.9 97 42.3
SalBow2G2966 Salvia bowleyana HOM05D012189 ORTHO05D000277 8.2e-15 84.7 186 32.8
SGA_v2.0_scaffold154G37147 Striga asiatica HOM05D000034 ORTHO05D000277 1.1e-14 84.3 60 61.7
SGA_v2.0_scaffold204G41621 Striga asiatica HOM05D012189 ORTHO05D000277 3.1e-14 82.8 121 42.1
Atru.chr10.926 Acer truncatum HOM05D001651 ORTHO05D000277 9.1e-14 81.3 190 33.2
Atru.chr2.3198 Acer truncatum HOM05D001651 ORTHO05D000277 1.2e-13 80.9 190 33.2
Actinidia06690 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.2e-13 80.9 176 32.4
Atru.chr12.953 Acer truncatum HOM05D001651 ORTHO05D000277 2.0e-13 80.1 190 32.6
SGA_v2.0_scaffold380G50359 Striga asiatica HOM05D009707 ORTHO05D010215 2.6e-13 79.7 171 29.8
CANSAT64G1414 Cannabis sativa HOM05D001651 ORTHO05D000277 5.9e-13 78.6 188 30.9
Hma1.2p1_0035F.1_g021910 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.9e-13 78.6 182 30.8
Actinidia35710 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.3e-12 77.4 188 31.4
Hma1.2p1_0127F.1_g059736 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.2e-12 76.6 177 30.5
Hma1.2p1_0286F.1_g113985 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.2e-12 76.6 177 30.5
SGA_v2.0_scaffold27G11629 Striga asiatica HOM05D009707 ORTHO05D010215 2.2e-12 76.6 162 29.0
SGA_v2.0_scaffold19G08712 Striga asiatica HOM05D009707 ORTHO05D010215 3.8e-12 75.9 171 29.2
SGA_v2.0_scaffold38G14973 Striga asiatica HOM05D009666 ORTHO05D400755 3.8e-12 75.9 80 55.0
Hma1.2p1_0354F.1_g133450 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.5e-12 75.1 177 29.9
vmacro07718 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 8.5e-12 74.7 187 31.6
CANSAT80G1436 Cannabis sativa HOM05D001651 ORTHO05D000277 1.1e-11 74.3 187 30.5
Hma1.2p1_0746F.1_g212360 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 1.4e-11 73.9 185 28.6
Hma1.2p1_0846F.1_g227800 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 1.4e-11 73.9 185 28.6
Hma1.2p1_0276F.1_g111440 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.5e-11 73.2 177 29.9
Actinidia26110 Actinidia chinensis HOM05D000034 ORTHO05D000277 4.2e-11 72.4 178 30.9
SalBow5G4537 Salvia bowleyana HOM05D009908 ORTHO05D012008 7.2e-11 71.6 183 32.2
Rhsim02G0110600 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.6e-10 70.5 200 30.0
SGA_v2.0_scaffold13G06465 Striga asiatica HOM05D000034 ORTHO05D000277 2.1e-10 70.1 188 27.1
CANSAT35G1292 Cannabis sativa HOM05D001651 ORTHO05D000277 2.7e-10 69.7 188 26.6
CSS0036595 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 3.6e-10 69.3 177 31.1
RhsimUnG0197200 Rhododendron simsii HOM05D000034 ORTHO05D000277 6.1e-10 68.6 182 28.6
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.0e-09 67.8 167 30.5
Hma1.2p1_0165F.1_g073390 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.0e-09 67.8 176 27.8
Dinv36440 Davidia involucrata HOM05D012673 ORTHO05D000277 1.4e-09 67.4 187 29.4
Dinv02446 Davidia involucrata HOM05D000034 ORTHO05D000277 3.9e-09 65.9 179 26.3
Rhsim07G0014400 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.9e-09 65.9 176 29.5
Rhsim10G0097900 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.9e-09 65.9 200 28.5
SGA_v2.0_scaffold70G23408 Striga asiatica HOM05D000228 ORTHO05D001122 3.9e-09 65.9 100 33.0
SGA_v2.0_scaffold53G19369 Striga asiatica HOM05D000034 ORTHO05D000277 5.1e-09 65.5 129 34.1
MELO3C008748.2 Cucumis melo HOM05D001651 ORTHO05D000277 6.7e-09 65.1 185 28.6
Hma1.2p1_0325F.1_g126110 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.7e-09 65.1 187 27.3
Hma1.2p1_0672F.1_g201070 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.7e-09 65.1 187 26.7
Rhsim02G0247200 Rhododendron simsii HOM05D000034 ORTHO05D000277 6.7e-09 65.1 175 29.1
Hma1.2p1_0207F.1_g087800 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.8e-09 64.7 187 26.7
Hma1.2p1_2373F.1_g320860 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.8e-09 64.7 191 26.7
Rhsim03G0108500 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.5e-08 63.9 176 29.0
Rhsim05G0045400 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.5e-08 63.9 176 29.0
SGA_v2.0_scaffold13G06594 Striga asiatica HOM05D012189 ORTHO05D000277 1.5e-08 63.9 98 35.7
Hma1.2p1_0232F.1_g097920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.0e-08 63.5 186 26.9
Hma1.2p1_0388F.1_g142330 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.3e-08 62.8 186 25.8
Hma1.2p1_0698F.1_g205360 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.3e-08 62.8 187 26.7
Hma1.2p1_2244F.1_g317920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.3e-08 62.8 186 25.3
EL10Ac3g05873 Beta vulgaris HOM05D000034 ORTHO05D000277 4.4e-08 62.4 187 27.3
SGA_v2.0_scaffold28G12043 Striga asiatica HOM05D009707 ORTHO05D000277 4.4e-08 62.4 113 29.2
CSS0024362 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 5.7e-08 62.0 185 29.7
Hma1.2p1_0203F.1_g086660 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.7e-08 62.0 186 26.9
CSS0015669 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 7.4e-08 61.6 185 29.7
MELO3C020454.2 Cucumis melo HOM05D001651 ORTHO05D009716 7.4e-08 61.6 185 28.6
Hma1.2p1_0587F.1_g184020 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.7e-08 61.2 174 25.9
Rhsim02G0154600 Rhododendron simsii HOM05D000034 ORTHO05D000277 9.7e-08 61.2 175 26.9
CSS0010302 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.3e-07 60.8 185 29.7
DCAR_009785 Daucus carota HOM05D001651 ORTHO05D000277 1.3e-07 60.8 173 27.7
DCAR_015799 Daucus carota HOM05D001651 ORTHO05D000277 1.3e-07 60.8 173 27.7
SGA_v2.0_scaffold3G01771 Striga asiatica HOM05D009707 ORTHO05D010215 1.7e-07 60.5 107 29.0
CSS0008044 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 2.8e-07 59.7 178 30.3
SalBow5G3070 Salvia bowleyana HOM05D009908 ORTHO05D012008 2.8e-07 59.7 132 29.5
SGA_v2.0_scaffold134G34763 Striga asiatica HOM05D009666 ORTHO05D000277 2.8e-07 59.7 110 38.2
SGA_v2.0_scaffold214G42275 Striga asiatica HOM05D009707 ORTHO05D010215 2.8e-07 59.7 111 30.6
Dinv16912 Davidia involucrata HOM05D012673 ORTHO05D000277 3.7e-07 59.3 187 27.3
Hma1.2p1_0046F.1_g026820 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.7e-07 59.3 186 25.3
Hma1.2p1_0081F.1_g042220 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.7e-07 59.3 175 26.3
CSS0033072 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 6.3e-07 58.5 185 29.2
CSS0040966 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 6.3e-07 58.5 185 29.2
Dinv07862 Davidia involucrata HOM05D000034 ORTHO05D000277 6.3e-07 58.5 176 27.8
Hma1.2p1_0633F.1_g192570 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.3e-07 58.5 175 25.7
Hma1.2p1_0489F.1_g164000 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-06 57.8 186 28.0
unitig_578.g15749 Utricularia gibba HOM05D042039 ORTHO05D420999 1.4e-06 57.4 126 32.5
CSS0016960 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.8e-06 57.0 174 27.6
Rhsim04G0059300 Rhododendron simsii HOM05D000034 ORTHO05D000277 2.4e-06 56.6 176 27.8
SGA_v2.0_scaffold50G18516 Striga asiatica HOM05D009707 ORTHO05D012008 3.1e-06 56.2 184 23.9
vmacro06986 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 4.1e-06 55.8 181 27.6
CSS0036649 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.3e-06 55.5 199 27.1
CSS0047009 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.3e-06 55.5 191 26.7
MELO3C028669.2 Cucumis melo HOM05D001651 ORTHO05D009716 5.3e-06 55.5 184 26.1
SGA_v2.0_scaffold312G48277 Striga asiatica HOM05D009666 ORTHO05D000277 5.3e-06 55.5 60 50.0
SGA_v2.0_scaffold327G48784 Striga asiatica HOM05D009707 ORTHO05D010215 5.3e-06 55.5 107 27.1
Hma1.2p1_0529F.1_g173280 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.0e-06 55.1 176 26.7
Hma1.2p1_1277F.1_g272250 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 7.0e-06 55.1 178 27.0
Rhsim10G0022500 Rhododendron simsii HOM05D000034 ORTHO05D000277 9.1e-06 54.7 175 25.1


User provided reference genes

Program Settings