Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold258G45770 Striga asiatica HOM05D002468 ORTHO05D009172 9.8e-155 550.1 270 100.0
MSTRG.8059 Avicennia marina HOM05D002468 ORTHO05D009172 8.4e-98 360.9 270 70.4
Oeu010258.1 Olea europaea HOM05D002468 ORTHO05D009172 1.2e-91 340.5 281 65.5
Migut.K01048 Erythranthe guttata HOM05D002468 ORTHO05D009172 2.4e-84 316.2 273 63.4
GSVIVG01001099001 Vitis vinifera HOM05D002468 ORTHO05D009172 2.5e-81 306.2 212 71.2
ClCG07G011930 Citrullus lanatus HOM05D002468 ORTHO05D009172 4.2e-81 305.4 270 63.3
Ciclev10005642m.g Citrus clementina HOM05D002468 ORTHO05D009172 1.6e-80 303.5 247 62.8
CsaV3_4G002230 Cucumis sativus L. HOM05D002468 ORTHO05D009172 6.1e-80 301.6 269 62.5
Sed0016874 Sechium edule HOM05D002468 ORTHO05D009172 2.3e-79 299.7 210 71.4
Nitab4.5_0004349g0030 Nicotiana tabacum HOM05D002468 ORTHO05D009172 3.9e-79 298.9 268 61.2
MELO3C017816.2 Cucumis melo HOM05D002468 ORTHO05D009172 6.7e-79 298.1 270 62.6
MD16G1141800 Malus domestica HOM05D002468 ORTHO05D009172 6.7e-79 298.1 276 59.8
Cfa009456 Carpinus fangiana HOM05D002468 ORTHO05D009172 1.5e-78 297.0 269 61.0
Actinidia30582 Actinidia chinensis HOM05D002468 ORTHO05D009172 2.0e-78 296.6 230 67.0
Hma1.2p1_1436F.1_g283230 Hydrangea macrophylla HOM05D002468 ORTHO05D009172 2.0e-78 296.6 280 58.2
RcHm_v2.0_Chr4g0428781 Rosa chinensis HOM05D002468 ORTHO05D009172 3.3e-78 295.8 274 58.8
Gohir.D04G141000 Gossypium hirsutum HOM05D002468 ORTHO05D009172 4.3e-78 295.4 266 60.5
Nitab4.5_0002569g0030 Nicotiana tabacum HOM05D002468 ORTHO05D009172 5.7e-78 295.0 267 60.7
Rhsim12G0017000 Rhododendron simsii HOM05D002468 ORTHO05D009172 9.7e-78 294.3 272 61.0
TAR622G1298 Trochodendron aralioides HOM05D002468 ORTHO05D009172 9.7e-78 294.3 278 57.9
Actinidia22113 Actinidia chinensis HOM05D002468 ORTHO05D005371 1.3e-77 293.9 227 67.4
TWI36G1656 Tripterygium wilfordii HOM05D002468 ORTHO05D009172 1.3e-77 293.9 265 59.2
CAN.G624.2 Capsicum annuum HOM05D002468 ORTHO05D009172 1.7e-77 293.5 247 63.6
Cc11_g14950 Coffea canephora HOM05D002468 ORTHO05D009172 2.2e-77 293.1 242 64.0
Lalb_Chr04g0257311 Lupinus albus HOM05D002468 ORTHO05D009172 2.8e-77 292.7 212 67.9
vmacro01016 Vaccinium macrocarpon HOM05D002468 ORTHO05D009172 2.8e-77 292.7 277 59.6
Gorai.012G126000 Gossypium raimondii HOM05D002468 ORTHO05D009172 3.7e-77 292.4 266 59.8
Eucgr.G01979 Eucalyptus grandis HOM05D002468 ORTHO05D009172 4.8e-77 292.0 215 69.8
Lj1g0015804 Lotus japonicus HOM05D002468 ORTHO05D009172 4.8e-77 292.0 238 63.4
Haze_12509 Corylus avellana HOM05D002468 ORTHO05D005371 6.3e-77 291.6 213 70.4
Peaxi162Scf00842g00418 Petunia axillaris HOM05D002468 ORTHO05D009172 6.3e-77 291.6 254 61.4
Manes.08G100500 Manihot esculenta HOM05D002468 ORTHO05D009172 1.1e-76 290.8 267 60.3
Sabra01G0047500 Salix brachista HOM05D002468 ORTHO05D009172 1.4e-76 290.4 256 60.9
Potri.001G068300 Populus trichocarpa HOM05D002468 ORTHO05D009172 2.4e-76 289.7 255 60.8
Sp6g30610 Schrenkiella parvula HOM05D002468 ORTHO05D009172 2.4e-76 289.7 272 59.6
Aqoxy5G03072 Aquilegia oxysepala HOM05D002468 ORTHO05D009172 3.1e-76 289.3 270 57.0
Atru.chr12.1429 Acer truncatum HOM05D002468 ORTHO05D009172 5.3e-76 288.5 273 58.6
Sopen11g017130 Solanum pennellii HOM05D002468 ORTHO05D009172 5.3e-76 288.5 228 64.9
Thecc.02G191300 Theobroma cacao HOM05D002468 ORTHO05D009172 5.3e-76 288.5 276 59.1
Solyc11g033284.1 Solanum lycopersicum HOM05D002468 ORTHO05D009172 9.1e-76 287.7 230 64.3
TWI75G1838 Tripterygium wilfordii HOM05D002468 ORTHO05D009172 9.1e-76 287.7 265 58.5
Aa31LG3G14280 Aethionema arabicum HOM05D002468 ORTHO05D009172 1.5e-75 287.0 280 57.1
CANSAT80G1997 Cannabis sativa HOM05D002468 ORTHO05D009172 2.0e-75 286.6 207 69.6
TPR.G9727 Trifolium pratense HOM05D002468 ORTHO05D009172 2.0e-75 286.6 211 68.2
PGSC0003DMG401028027 Solanum tuberosum HOM05D002468 ORTHO05D009172 4.5e-75 285.4 228 64.5
Phvul.008G009400 Phaseolus vulgaris HOM05D002468 ORTHO05D009172 1.0e-74 284.3 233 63.1
THA.LOC104825606 Tarenaya hassleriana HOM05D002468 ORTHO05D009172 1.7e-74 283.5 274 57.3
FvH4_4g22550 Fragaria vesca HOM05D002468 ORTHO05D009172 3.8e-74 282.3 266 58.3
PGR119G1456 Punica granatum HOM05D002468 ORTHO05D009172 3.8e-74 282.3 264 59.8
FAN17G0051 Fragaria x ananassa HOM05D002468 ORTHO05D005371 5.0e-74 282.0 210 67.1
A02p01900 Brassica napus HOM05D002468 ORTHO05D009172 6.5e-74 281.6 271 58.3
BraA02t05163Z Brassica rapa HOM05D002468 ORTHO05D009172 6.5e-74 281.6 271 58.3
FAN07G2873 Fragaria x ananassa HOM05D002468 ORTHO05D009172 6.5e-74 281.6 276 56.9
BcaNung01882 Brassica carinata HOM05D002468 ORTHO05D009172 8.5e-74 281.2 267 59.2
CARHR200020 Cardamine hirsuta HOM05D002468 ORTHO05D009172 1.4e-73 280.4 273 57.5
AT5G13410 Arabidopsis thaliana HOM05D002468 ORTHO05D009172 3.2e-73 279.3 274 56.9
BcaNung01157 Brassica carinata HOM05D002468 ORTHO05D009172 3.2e-73 279.3 275 56.4
AL6G24030 Arabidopsis lyrata HOM05D002468 ORTHO05D009172 4.2e-73 278.9 274 56.6
Medtr7g006570 Medicago truncatula HOM05D002468 ORTHO05D009172 4.2e-73 278.9 237 62.9
Aqoxy5G03073 Aquilegia oxysepala HOM05D002468 ORTHO05D009172 7.2e-73 278.1 267 56.6
DCAR_026442 Daucus carota HOM05D002468 ORTHO05D009172 2.1e-72 276.6 209 67.0
Carub.0006s1157 Capsella rubella HOM05D002468 ORTHO05D009172 2.7e-72 276.2 217 65.0
EL10Ac7g17009 Beta vulgaris HOM05D002468 ORTHO05D009172 3.6e-72 275.8 170 77.1
CDE06G1087 Ceratophyllum demersum HOM05D002468 ORTHO05D009172 3.6e-72 275.8 277 57.0
AUR62041001 Chenopodium quinoa HOM05D002468 ORTHO05D009172 3.6e-72 275.8 257 56.4
Glyma.18G292600 Glycine max HOM05D002468 ORTHO05D009172 4.7e-72 275.4 184 74.5
Sc11g0000070 Simmondsia chinensis HOM05D002468 ORTHO05D009172 4.7e-72 275.4 232 63.8
PSO017G2800 Papaver somniferum HOM05D002468 ORTHO05D009172 6.1e-72 275.0 209 66.0
VMungo1383G2635 Vigna mungo HOM05D002468 ORTHO05D009172 7.9e-72 274.6 243 58.0
ATR0582G095 Amborella trichopoda HOM05D002468 ORTHO05D009172 3.0e-71 272.7 197 69.0
ECA246G0169 Erigeron canadensis HOM05D002468 ORTHO05D005371 8.8e-71 271.2 209 65.1
Lsat_1_v5_gn_3_32621 Lactuca sativa HOM05D002468 ORTHO05D009172 2.6e-70 269.6 259 57.1
Os07g0133700 Oryza sativa ssp. japonica HOM05D002468 ORTHO05D009172 9.7e-70 267.7 210 64.8
Thhalv10014743m.g Eutrema salsugineum HOM05D002468 ORTHO05D009172 1.7e-69 266.9 205 66.8
Zm00001eb040970 Zea mays HOM05D002468 ORTHO05D009172 1.7e-69 266.9 210 64.3
Lj6A840G36 Lonicera japonica HOM05D002468 ORTHO05D009172 2.2e-69 266.5 168 76.2
HPP92_024421 Vanilla planifolia HOM05D002468 ORTHO05D009172 8.2e-69 264.6 210 65.2
BolC2t06553H Brassica oleracea HOM05D002468 ORTHO05D009172 1.4e-68 263.8 278 54.0
C02p06120 Brassica napus HOM05D002468 ORTHO05D009172 2.4e-68 263.1 288 52.8
Pp3c16_12110 Physcomitrium patens HOM05D002468 ORTHO05D009172 5.9e-67 258.5 228 59.2
AagrBONN_evm.TU.Sc2ySwM_344.1577 Anthoceros agrestis HOM05D002468 ORTHO05D009172 5.5e-65 251.9 210 61.9
Pp3c5_13790 Physcomitrium patens HOM05D002468 ORTHO05D009172 1.6e-64 250.4 239 56.5
SEGI_23050 Sequoiadendron giganteum HOM05D002468 ORTHO05D009172 1.6e-64 250.4 209 59.8
SMO137G0309 Selaginella moellendorffii HOM05D002468 ORTHO05D009172 4.7e-64 248.8 168 71.4
Cpa.g.sc38.65 Carica papaya HOM05D002468 ORTHO05D009172 2.3e-63 246.5 155 77.4
Mapoly0061s0100 Marchantia polymorpha HOM05D002468 ORTHO05D009172 6.7e-63 245.0 211 60.2
arahy.Tifrunner.gnm1.ann1.PEQR69 Arachis hypogaea HOM05D002468 ORTHO05D009172 2.0e-59 233.4 275 49.5
arahy.Tifrunner.gnm1.ann1.QPD63Z Arachis hypogaea HOM05D002468 ORTHO05D009172 2.0e-59 233.4 275 49.5
CBR_g38077 Chara braunii HOM05D002468 ORTHO05D009172 4.2e-57 225.7 164 65.9
Gohir.A04G101800 Gossypium hirsutum HOM05D002468 ORTHO05D009172 6.8e-55 218.4 266 49.6
Prupe.1G214100 Prunus persica HOM05D002468 ORTHO05D009172 3.5e-51 206.1 197 58.4
Cre12.g534700 Chlamydomonas reinhardtii HOM05D002468 ORTHO05D009172 1.2e-48 197.6 179 55.9
QL03p049029 Quercus lobata HOM05D002468 ORTHO05D009172 2.1e-48 196.8 194 57.2
CSS0032033 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 3.6e-48 196.1 174 60.3
Ca_07032_v3 Cicer arietinum L. HOM05D002468 ORTHO05D009172 3.6e-48 196.1 132 69.7
CiPaw.05G100600 Carya illinoinensis HOM05D002468 ORTHO05D009172 4.7e-48 195.7 190 57.4
Dinv17538 Davidia involucrata HOM05D002468 ORTHO05D009172 1.4e-47 194.1 201 55.7
Nn4g22124 Nelumbo nucifera HOM05D002468 ORTHO05D009172 8.8e-47 191.4 195 54.4
MBI11_g34559_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D009172 1.3e-45 187.6 188 56.4
THA.LOC104816706 Tarenaya hassleriana HOM05D002468 ORTHO05D009172 6.3e-45 185.3 125 72.0
Ah.06g186920 Amaranthus hybridus HOM05D002468 ORTHO05D009172 5.4e-44 182.2 163 57.7
Glyma.02G090600 Glycine max HOM05D002468 ORTHO05D009172 1.6e-43 180.6 158 57.0
MD13G1131500 Malus domestica HOM05D002468 ORTHO05D009172 1.0e-42 177.9 169 55.6
Psat3g206960 Pisum sativum HOM05D002468 ORTHO05D009172 2.3e-42 176.8 155 58.7
PRCOL_00000716 Prasinoderma coloniale HOM05D002468 ORTHO05D009172 2.2e-37 160.2 173 51.4
Hma1.2p1_1436F.1_g283220 Hydrangea macrophylla HOM05D002468 ORTHO05D009172 1.5e-25 120.9 150 46.7
MCO06G148 Micromonas commoda HOM05D002468 ORTHO05D009172 1.3e-21 107.8 161 41.0
Ah.06g186900 Amaranthus hybridus HOM05D002468 ORTHO05D009172 6.4e-21 105.5 56 85.7
PRCOL_00003949 Prasinoderma coloniale HOM05D002468 ORTHO05D009172 7.1e-20 102.1 158 40.5
QL02p011811 Quercus lobata HOM05D002468 ORTHO05D009172 1.2e-16 91.3 54 74.1
MCO11G048 Micromonas commoda HOM05D002468 ORTHO05D009172 1.5e-14 84.3 155 38.7
Cre02.g095122 Chlamydomonas reinhardtii HOM05D002468 ORTHO05D009172 1.6e-11 74.3 175 32.0
Eucgr.E01894 Eucalyptus grandis HOM05D007400 ORTHO05D009351 8.9e-07 58.5 164 29.9
Mapoly0025s0105 Marchantia polymorpha HOM05D007400 ORTHO05D009351 1.2e-06 58.2 156 30.1
Oeu050064.1 Olea europaea HOM05D007400 ORTHO05D009351 1.5e-06 57.8 168 30.4
Cre02.g095450 Chlamydomonas reinhardtii HOM05D007127 ORTHO05D008803 7.6e-06 55.5 154 31.2


User provided reference genes

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