Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold257G45734 Striga asiatica HOM05D006303 ORTHO05D008007 1.4e-131 473.4 327 100.0
MSTRG.4016 Avicennia marina HOM05D006303 ORTHO05D008007 9.4e-35 151.8 242 45.5
MSTRG.24747 Avicennia marina HOM05D006303 ORTHO05D008007 2.6e-32 143.7 203 48.3
Migut.G00317 Erythranthe guttata HOM05D006303 ORTHO05D008007 1.8e-30 137.5 230 48.3
Duzib212G0816 Durio zibethinus HOM05D006303 ORTHO05D008007 7.2e-27 125.6 254 39.8
CiPaw.02G095400 Carya illinoinensis HOM05D006303 ORTHO05D008007 9.4e-27 125.2 237 44.7
TWI09G0488 Tripterygium wilfordii HOM05D006303 ORTHO05D008007 1.2e-26 124.8 237 43.9
Gorai.006G237600 Gossypium raimondii HOM05D006303 ORTHO05D008007 6.1e-26 122.5 209 43.5
Gohir.A09G214600 Gossypium hirsutum HOM05D006303 ORTHO05D008007 8.0e-26 122.1 209 43.5
Gohir.D09G217100 Gossypium hirsutum HOM05D006303 ORTHO05D008007 8.0e-26 122.1 209 43.5
TWI53G0528 Tripterygium wilfordii HOM05D006303 ORTHO05D008007 2.3e-25 120.6 239 41.4
Cfa015618 Carpinus fangiana HOM05D006303 ORTHO05D008007 3.0e-25 120.2 200 45.5
Oeu034363.1 Olea europaea HOM05D006303 ORTHO05D008007 3.0e-25 120.2 230 44.3
COL.COLO4_06194 Corchorus olitorius HOM05D006303 ORTHO05D008007 4.0e-25 119.8 248 39.1
Haze_00877 Corylus avellana HOM05D006303 ORTHO05D008007 8.8e-25 118.6 186 46.8
CiPaw.01G163800 Carya illinoinensis HOM05D006303 ORTHO05D008007 1.2e-24 118.2 201 44.8
Nn4g26265 Nelumbo nucifera HOM05D006303 ORTHO05D008007 1.2e-24 118.2 225 40.0
Duzib052G1015 Durio zibethinus HOM05D006303 ORTHO05D008007 1.5e-24 117.9 251 40.2
Manes.03G181100 Manihot esculenta HOM05D006303 ORTHO05D008007 3.4e-24 116.7 240 39.2
Atru.chr4.2516 Acer truncatum HOM05D006303 ORTHO05D008007 4.4e-24 116.3 241 40.7
Thecc.04G227500 Theobroma cacao HOM05D006303 ORTHO05D008007 4.4e-24 116.3 217 41.5
Manes.15G026800 Manihot esculenta HOM05D006303 ORTHO05D008007 5.7e-24 115.9 214 43.5
Sabra10G0052900 Salix brachista HOM05D006303 ORTHO05D008007 1.3e-23 114.8 251 40.2
SalBow5G2627 Salvia bowleyana HOM05D006303 ORTHO05D008007 1.7e-23 114.4 248 43.5
TAR365G0083 Trochodendron aralioides HOM05D006303 ORTHO05D008007 2.2e-23 114.0 212 42.5
Aqoxy5G00502 Aquilegia oxysepala HOM05D006303 ORTHO05D008007 2.8e-23 113.6 231 39.4
Lsat_1_v5_gn_5_148441 Lactuca sativa HOM05D006303 ORTHO05D008007 3.7e-23 113.2 226 39.4
SalBow5G4234 Salvia bowleyana HOM05D006303 ORTHO05D008007 4.8e-23 112.8 252 42.9
Cpa.g.sc147.34 Carica papaya HOM05D006303 ORTHO05D008007 6.3e-23 112.5 225 41.3
Potri.010G090500 Populus trichocarpa HOM05D006303 ORTHO05D008007 8.3e-23 112.1 229 39.7
Cc03_g03480 Coffea canephora HOM05D006303 ORTHO05D008007 1.4e-22 111.3 254 38.6
ClCG06G006020 Citrullus lanatus HOM05D006303 ORTHO05D008007 1.8e-22 110.9 239 39.7
Medtr5g005960 Medicago truncatula HOM05D006303 ORTHO05D008007 1.8e-22 110.9 236 36.9
Ca_24387_v3 Cicer arietinum L. HOM05D006303 ORTHO05D008007 2.4e-22 110.5 201 38.3
Sed0009344 Sechium edule HOM05D006303 ORTHO05D008007 2.4e-22 110.5 225 40.4
HanXRQChr15g0466041 Helianthus annuus HOM05D006303 ORTHO05D008007 5.4e-22 109.4 226 38.5
ECA234G3153 Erigeron canadensis HOM05D006303 ORTHO05D008007 1.2e-21 108.2 238 38.2
Psat4g211440 Pisum sativum HOM05D006303 ORTHO05D008007 1.6e-21 107.8 231 38.1
TPR.G37902 Trifolium pratense HOM05D006303 ORTHO05D008007 1.6e-21 107.8 199 40.7
Nn1g02244 Nelumbo nucifera HOM05D006303 ORTHO05D008007 2.0e-21 107.5 244 38.5
VMungo1215G3149 Vigna mungo HOM05D006303 ORTHO05D008007 2.0e-21 107.5 243 36.2
DCAR_027185 Daucus carota HOM05D006303 ORTHO05D008007 4.5e-21 106.3 223 38.1
Glyma.11G004400 Glycine max HOM05D006303 ORTHO05D008007 4.5e-21 106.3 259 34.7
Lj1g0001361 Lotus japonicus HOM05D006303 ORTHO05D008007 4.5e-21 106.3 253 37.5
Oeu004490.1 Olea europaea HOM05D006303 ORTHO05D008007 4.5e-21 106.3 188 42.6
Ciclev10005353m.g Citrus clementina HOM05D006303 ORTHO05D008007 5.9e-21 105.9 224 43.3
FvH4_4g15080 Fragaria vesca HOM05D006303 ORTHO05D008007 5.9e-21 105.9 227 37.4
QL06p003344 Quercus lobata HOM05D006303 ORTHO05D008007 5.9e-21 105.9 238 39.5
Aqoxy2G03353 Aquilegia oxysepala HOM05D006303 ORTHO05D008007 7.7e-21 105.5 179 40.2
PGR004G2192 Punica granatum HOM05D006303 ORTHO05D008007 7.7e-21 105.5 204 40.7
FAN12G1910 Fragaria x ananassa HOM05D006303 ORTHO05D008007 1.7e-20 104.4 227 37.0
FAN22G0434 Fragaria x ananassa HOM05D006303 ORTHO05D008007 2.2e-20 104.0 227 38.8
SalBow2G0078 Salvia bowleyana HOM05D006303 ORTHO05D008007 2.9e-20 103.6 199 40.2
MD16G1188900 Malus domestica HOM05D006303 ORTHO05D008007 3.8e-20 103.2 214 38.3
MELO3C014489.2 Cucumis melo HOM05D006303 ORTHO05D008007 6.5e-20 102.4 233 36.9
FAN07G1279 Fragaria x ananassa HOM05D006303 ORTHO05D008007 8.5e-20 102.1 227 38.3
FAN17G3084 Fragaria x ananassa HOM05D006303 ORTHO05D008007 1.1e-19 101.7 227 37.9
Nitab4.5_0000260g0090 Nicotiana tabacum HOM05D006303 ORTHO05D008007 1.9e-19 100.9 234 35.9
THA.LOC104802760 Tarenaya hassleriana HOM05D006303 ORTHO05D008007 3.2e-19 100.1 230 37.8
arahy.Tifrunner.gnm1.ann1.RSQ2PF Arachis hypogaea HOM05D006303 ORTHO05D008007 5.5e-19 99.4 236 41.1
Dinv38426 Davidia involucrata HOM05D006303 ORTHO05D008007 9.4e-19 98.6 181 42.5
SGA_v2.0_scaffold10G05105 Striga asiatica HOM05D006303 ORTHO05D008007 9.4e-19 98.6 227 39.2
CsaV3_6G038260 Cucumis sativus L. HOM05D006303 ORTHO05D008007 1.6e-18 97.8 235 37.4
Nitab4.5_0007531g0010 Nicotiana tabacum HOM05D006303 ORTHO05D008007 1.6e-18 97.8 231 35.9
CANSAT78G1152 Cannabis sativa HOM05D006303 ORTHO05D008007 2.1e-18 97.4 256 37.1
Hma1.2p1_0517F.1_g171030 Hydrangea macrophylla HOM05D006303 ORTHO05D008007 2.7e-18 97.1 233 39.9
Phvul.002G047200 Phaseolus vulgaris HOM05D006303 ORTHO05D008007 2.7e-18 97.1 240 34.6
MBI17_g34761_MAGBIO Magnolia biondii HOM05D006303 ORTHO05D008007 3.6e-18 96.7 210 39.5
Lsat_1_v5_gn_7_65920 Lactuca sativa HOM05D006303 ORTHO05D008007 6.1e-18 95.9 232 38.4
Peaxi162Scf00437g00041 Petunia axillaris HOM05D006303 ORTHO05D008007 1.0e-17 95.1 246 35.8
Sopen09g030560 Solanum pennellii HOM05D006303 ORTHO05D008007 1.4e-17 94.7 231 34.6
Dinv44508 Davidia involucrata HOM05D006303 ORTHO05D008007 1.8e-17 94.4 198 38.9
Nn3g18018 Nelumbo nucifera HOM05D006303 ORTHO05D008007 1.8e-17 94.4 153 43.8
Solyc09g075750.1 Solanum lycopersicum HOM05D006303 ORTHO05D008007 2.3e-17 94.0 229 34.5
PGSC0003DMG400031852 Solanum tuberosum HOM05D006303 ORTHO05D008007 2.3e-17 94.0 234 35.9
A06p36730 Brassica napus HOM05D006303 ORTHO05D008007 1.2e-16 91.7 232 37.5
BraA06t26595Z Brassica rapa HOM05D006303 ORTHO05D008007 1.2e-16 91.7 232 37.5
MD13G1188500 Malus domestica HOM05D006303 ORTHO05D008007 2.0e-16 90.9 226 37.6
C07p41810 Brassica napus HOM05D006303 ORTHO05D008007 9.8e-16 88.6 233 36.5
Thhalv10004558m.g Eutrema salsugineum HOM05D006303 ORTHO05D008007 9.8e-16 88.6 197 37.6
AL6G38240 Arabidopsis lyrata HOM05D006303 ORTHO05D008007 1.3e-15 88.2 203 39.9
BcaNung03972 Brassica carinata HOM05D006303 ORTHO05D008007 2.2e-15 87.4 212 35.8
PSO135G0705 Papaver somniferum HOM05D006303 ORTHO05D008007 2.8e-15 87.0 242 36.4
Sp2g21520 Schrenkiella parvula HOM05D006303 ORTHO05D008007 2.8e-15 87.0 204 35.8
Nn2g13850 Nelumbo nucifera HOM05D006303 ORTHO05D008007 8.3e-15 85.5 175 38.9
A09p05910 Brassica napus HOM05D006303 ORTHO05D008007 1.1e-14 85.1 229 38.4
AT5G26230 Arabidopsis thaliana HOM05D006303 ORTHO05D008007 1.4e-14 84.7 207 38.2
Sc13g0004270 Simmondsia chinensis HOM05D006303 ORTHO05D008007 1.4e-14 84.7 237 33.8
Zm00001eb350820 Zea mays HOM05D006303 ORTHO05D008007 1.4e-14 84.7 252 34.5
BcaNung02811 Brassica carinata HOM05D006303 ORTHO05D008007 1.8e-14 84.3 233 36.9
BolC7t44712H Brassica oleracea HOM05D006303 ORTHO05D008007 1.8e-14 84.3 233 36.9
BraA09t36233Z Brassica rapa HOM05D006303 ORTHO05D008007 1.8e-14 84.3 197 37.6
Prupe.1G155600 Prunus persica HOM05D006303 ORTHO05D008007 1.8e-14 84.3 206 35.0
BcaC04g23610 Brassica carinata HOM05D006303 ORTHO05D008007 2.4e-14 84.0 194 38.1
BolC9t53571H Brassica oleracea HOM05D006303 ORTHO05D008007 2.4e-14 84.0 194 39.2
BcaB04g19742 Brassica carinata HOM05D006303 ORTHO05D008007 4.1e-14 83.2 234 36.8
Rhsim04G0205200 Rhododendron simsii HOM05D006303 ORTHO05D008007 4.1e-14 83.2 156 39.7
C09p06490 Brassica napus HOM05D006303 ORTHO05D008007 9.1e-14 82.0 193 38.3
Carub.0006s2405 Capsella rubella HOM05D006303 ORTHO05D008007 1.2e-13 81.6 217 37.8
Ah.04g154500 Amaranthus hybridus HOM05D006303 ORTHO05D008007 4.5e-13 79.7 205 36.6
CARHR187140 Cardamine hirsuta HOM05D006303 ORTHO05D008007 1.3e-12 78.2 211 34.6
PSO384G0046 Papaver somniferum HOM05D006303 ORTHO05D008007 1.3e-12 78.2 226 36.7
AUR62038095 Chenopodium quinoa HOM05D006303 ORTHO05D008007 2.3e-12 77.4 183 36.1
EL10As3g23363 Beta vulgaris HOM05D006303 ORTHO05D008007 1.2e-10 71.6 202 38.1
PSO675G0548 Papaver somniferum HOM05D006303 ORTHO05D008007 2.1e-10 70.9 204 31.9
SEGI_38862 Sequoiadendron giganteum HOM05D006303 ORTHO05D008007 2.1e-10 70.9 139 41.7
GSVIVG01017928001 Vitis vinifera HOM05D006303 ORTHO05D008007 1.4e-09 68.2 85 51.8
PSO717G0040 Papaver somniferum HOM05D006303 ORTHO05D008007 1.8e-09 67.8 204 30.4
ClCG05G005270 Citrullus lanatus HOM05D006303 ORTHO05D008007 3.0e-09 67.0 225 32.4
Os05g0390600 Oryza sativa ssp. japonica HOM05D006303 ORTHO05D008007 3.0e-09 67.0 172 33.7
MELO3C006546.2 Cucumis melo HOM05D006303 ORTHO05D008007 4.0e-09 66.6 226 32.7
CsaV3_3G013490 Cucumis sativus L. HOM05D006303 ORTHO05D008007 3.4e-08 63.5 224 32.1
Lj6C598T9 Lonicera japonica HOM05D006303 ORTHO05D008007 4.4e-08 63.2 85 50.6
ATR0626G102 Amborella trichopoda HOM05D006303 ORTHO05D008007 5.7e-08 62.8 185 34.1
arahy.Tifrunner.gnm1.ann1.KMTU0V Arachis hypogaea HOM05D006303 ORTHO05D008007 9.8e-08 62.0 212 30.7
arahy.Tifrunner.gnm1.ann1.S8XWMG Arachis hypogaea HOM05D006303 ORTHO05D008007 2.2e-07 60.8 216 30.6
AUR62038636 Chenopodium quinoa HOM05D006303 ORTHO05D008007 7.0e-06 55.8 78 48.7
Sed0019333 Sechium edule HOM05D006303 ORTHO05D008007 9.2e-06 55.5 190 32.6


User provided reference genes

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