Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 5.8e-203 710.7 361 100.0
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 1.3e-106 390.6 353 58.9
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 3.7e-101 372.5 358 55.9
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 2.3e-98 363.2 355 56.1
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 8.6e-98 361.3 357 54.3
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 3.3e-97 359.4 358 54.5
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 1.4e-92 344.0 331 58.3
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 4.6e-91 339.0 361 52.6
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 3.0e-90 336.3 355 53.0
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 1.9e-89 333.6 361 51.8
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 1.2e-86 324.3 361 52.1
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 1.2e-86 324.3 356 48.6
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 2.0e-86 323.6 357 49.9
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 9.9e-86 321.2 352 51.7
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 3.8e-85 319.3 363 51.8
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 4.9e-85 318.9 336 51.8
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 1.0e-82 311.2 327 51.7
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 3.6e-80 302.8 355 47.0
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 4.8e-80 302.4 351 46.7
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 2.0e-78 297.0 336 50.6
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 3.8e-77 292.7 332 49.4
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 6.4e-77 292.0 332 47.3
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 8.4e-77 291.6 355 49.0
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 8.4e-77 291.6 345 48.7
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 1.1e-76 291.2 362 48.9
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 1.4e-76 290.8 346 48.6
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 5.4e-76 288.9 332 48.5
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 5.4e-76 288.9 343 48.7
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 9.3e-76 288.1 338 49.4
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 1.2e-75 287.7 368 45.7
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 1.6e-75 287.3 332 46.4
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 2.1e-75 287.0 343 48.1
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 2.7e-75 286.6 353 48.4
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 2.7e-75 286.6 348 46.0
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 3.5e-75 286.2 367 45.5
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 4.6e-75 285.8 356 46.9
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 6.0e-75 285.4 360 46.9
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 6.0e-75 285.4 360 46.9
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 6.0e-75 285.4 360 46.9
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 6.0e-75 285.4 357 46.5
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 1.3e-74 284.3 346 46.5
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 3.0e-74 283.1 350 47.1
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 3.9e-74 282.7 335 49.3
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 3.9e-74 282.7 365 44.1
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 6.7e-74 282.0 354 46.6
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 1.5e-73 280.8 343 46.1
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 2.5e-73 280.0 357 46.2
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 3.6e-72 276.2 356 45.5
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 1.8e-71 273.9 336 48.5
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 6.9e-71 271.9 336 45.2
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 9.0e-71 271.6 343 48.1
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 2.6e-70 270.0 337 44.5
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 5.8e-70 268.9 321 43.9
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 5.8e-70 268.9 318 46.2
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 1.3e-69 267.7 352 44.9
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 2.2e-69 266.9 319 46.1
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 4.9e-69 265.8 345 44.1
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 8.4e-69 265.0 319 46.1
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 3.2e-68 263.1 318 45.0
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 7.1e-68 261.9 360 43.3
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 1.2e-67 261.2 326 46.3
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 1.2e-67 261.2 357 44.0
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 6.0e-67 258.8 334 44.0
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 3.9e-66 256.1 331 42.9
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 5.1e-66 255.8 335 41.8
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 5.1e-66 255.8 334 45.8
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 9.6e-65 251.5 321 45.2
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 6.2e-64 248.8 309 44.0
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 3.1e-63 246.5 344 41.3
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 1.5e-62 244.2 313 40.6
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 1.0e-61 241.5 332 41.6
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 3.5e-59 233.0 341 40.5
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 7.9e-59 231.9 362 39.2
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 2.3e-58 230.3 304 44.4
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 3.9e-58 229.6 338 41.7
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 1.5e-57 227.6 281 43.1
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 5.7e-57 225.7 308 45.1
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 2.1e-56 223.8 326 40.8
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 2.1e-56 223.8 326 40.8
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 2.1e-56 223.8 326 40.8
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 2.8e-56 223.4 337 38.6
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 6.3e-56 222.2 319 40.8
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 2.4e-55 220.3 319 40.4
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 5.3e-55 219.2 347 38.6
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 1.5e-54 217.6 347 37.5
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 1.5e-54 217.6 319 40.1
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 1.5e-54 217.6 340 42.4
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 1.3e-53 214.5 303 41.6
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 1.7e-53 214.2 344 39.8
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 1.7e-53 214.2 320 40.3
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 1.7e-53 214.2 255 49.4
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 2.9e-53 213.4 339 38.3
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 6.5e-53 212.2 326 39.6
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 1.9e-52 210.7 201 51.7
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 4.2e-52 209.5 343 38.8
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 1.2e-51 208.0 369 35.0
unitig_32.g11728 Utricularia gibba HOM05D005574 ORTHO05D007102 1.8e-50 204.1 354 39.0
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 6.7e-50 202.2 349 34.7
PGR142G0953 Punica granatum HOM05D005574 ORTHO05D007102 1.1e-49 201.4 333 39.6
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 2.4e-47 193.7 328 36.6
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 9.1e-47 191.8 267 45.3
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 5.1e-42 176.0 258 41.5
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 2.0e-41 174.1 342 33.3
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 1.2e-38 164.9 325 33.2
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 5.0e-37 159.5 266 38.7
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 3.7e-32 143.3 295 32.2
Os03g0747100 Oryza sativa ssp. japonica HOM05D005574 ORTHO05D007102 1.1e-31 141.7 303 33.3
Zm00001eb057090 Zea mays HOM05D005574 ORTHO05D007102 5.3e-31 139.4 303 32.0
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 1.6e-30 137.9 132 53.0
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 1.9e-28 131.0 135 49.6
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 7.2e-28 129.0 137 47.4
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 8.0e-27 125.6 195 34.9
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 8.0e-27 125.6 186 36.0
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 2.2e-24 117.5 156 38.5
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 7.7e-22 109.0 255 32.9
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 3.2e-20 103.6 102 48.0
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 1.3e-16 91.7 94 46.8
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 2.2e-16 90.9 145 34.5
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 9.1e-15 85.5 114 38.6
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 9.1e-15 85.5 114 38.6
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 7.7e-14 82.4 92 43.5
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 1.0e-13 82.0 114 36.8
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 1.0e-13 82.0 114 36.8
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 1.0e-13 82.0 114 37.7
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 2.3e-13 80.9 114 36.8
A09p57160 Brassica napus HOM05D005574 ORTHO05D007102 1.1e-12 78.6 69 52.2
BcaC09g48798 Brassica carinata HOM05D005574 ORTHO05D007102 6.8e-10 69.3 96 36.5
A09p67440 Brassica napus HOM05D005574 ORTHO05D007102 2.6e-09 67.4 93 36.6
BcaC07g42131 Brassica carinata HOM05D005574 ORTHO05D007102 3.4e-09 67.0 103 34.0
C08p51720 Brassica napus HOM05D005574 ORTHO05D007102 3.4e-09 67.0 103 34.0
C01p45800 Brassica napus HOM05D005574 ORTHO05D007102 1.1e-07 62.0 154 27.9
Sabra08G0117800 Salix brachista HOM05D000633 ORTHO05D000477 2.0e-06 57.8 85 36.5


User provided reference genes

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