Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold257G45673 Striga asiatica HOM05D009108 ORTHO05D011557 8.2e-151 537.0 259 100.0
SGA_v2.0_scaffold170G38837 Striga asiatica HOM05D009108 ORTHO05D011557 1.0e-100 370.5 237 80.2
SGA_v2.0_scaffold1030G53801 Striga asiatica HOM05D009108 ORTHO05D011557 6.5e-55 218.4 115 94.8
SGA_v2.0_scaffold170G38839 Striga asiatica HOM05D009108 ORTHO05D011557 1.8e-41 173.7 128 71.1
SGA_v2.0_scaffold67G22544 Striga asiatica HOM05D009108 ORTHO05D400178 3.2e-30 136.3 67 95.5
SGA_v2.0_scaffold75G24939 Striga asiatica HOM05D009108 ORTHO05D011557 6.3e-26 122.1 264 34.5
Os03g0276850 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 5.9e-24 115.5 271 29.5
Os12g0569800 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 2.2e-18 97.1 157 40.1
Nitab4.5_0001190g0020 Nicotiana tabacum HOM05D009108 ORTHO05D011557 1.4e-17 94.4 111 42.3
Nitab4.5_0009884g0010 Nicotiana tabacum HOM05D009108 ORTHO05D011557 3.1e-17 93.2 111 43.2
SGA_v2.0_scaffold126G33799 Striga asiatica HOM05D009108 ORTHO05D011557 4.5e-16 89.4 119 42.9
SGA_v2.0_scaffold67G22546 Striga asiatica HOM05D009108 ORTHO05D402452 9.5e-14 81.6 42 90.5
SGA_v2.0_scaffold63G21783 Striga asiatica HOM05D009108 ORTHO05D011557 8.9e-12 75.1 94 43.6
Os02g0115950 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 5.7e-11 72.4 118 35.6
Hma1.2p1_1829F.1_g304550 Hydrangea macrophylla HOM05D009108 ORTHO05D011557 3.2e-09 66.6 113 34.5
FAN01G2174 Fragaria x ananassa HOM05D009108 ORTHO05D011557 9.2e-09 65.1 87 41.4


User provided reference genes

Program Settings