Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold255G45599 Striga asiatica HOM05D008105 ORTHO05D010309 4.7e-174 614.4 301 100.0
SHI36845 Sapria himalayana HOM05D009256 ORTHO05D011704 3.8e-22 109.8 95 62.1
Nitab4.5_0012260g0030 Nicotiana tabacum HOM05D008105 ORTHO05D010309 6.7e-19 99.0 73 65.8
Solyc10g048060.2 Solanum lycopersicum HOM05D008105 ORTHO05D010309 1.5e-18 97.8 47 91.5
PGSC0003DMG400019855 Solanum tuberosum HOM05D008105 ORTHO05D010309 1.5e-18 97.8 47 91.5
DCAR_024277 Daucus carota HOM05D008105 ORTHO05D010309 1.9e-18 97.4 47 91.5
DCAR_031801 Daucus carota HOM05D008105 ORTHO05D010309 1.9e-18 97.4 47 91.5
ECA039G0009 Erigeron canadensis HOM05D008105 ORTHO05D010309 1.9e-18 97.4 47 91.5
Lsat_1_v5_gn_3_92260 Lactuca sativa HOM05D008105 ORTHO05D010309 1.9e-18 97.4 47 91.5
Lsat_1_v5_gn_7_25421 Lactuca sativa HOM05D008105 ORTHO05D010309 1.9e-18 97.4 47 91.5
Lsat_1_v5_gn_9_5080 Lactuca sativa HOM05D008105 ORTHO05D010309 1.9e-18 97.4 47 91.5
Nn1g10137 Nelumbo nucifera HOM05D008105 ORTHO05D010309 1.9e-18 97.4 47 91.5
TPR.G40844 Trifolium pratense HOM05D008105 ORTHO05D010309 5.6e-18 95.9 47 89.4
Lsat_1_v5_gn_7_101141 Lactuca sativa HOM05D008105 ORTHO05D010309 7.4e-18 95.5 47 89.4
ATMG00030 Arabidopsis thaliana HOM05D008105 ORTHO05D010309 2.8e-17 93.6 44 93.2
BNapus_Darmor_BZH_scaffold_234p00090 Brassica napus HOM05D008105 ORTHO05D010309 2.8e-17 93.6 44 93.2
CARHR282600 Cardamine hirsuta HOM05D008105 ORTHO05D010309 2.8e-17 93.6 44 93.2
Lsat_1_v5_gn_0_34941 Lactuca sativa HOM05D008105 ORTHO05D010309 2.8e-17 93.6 47 89.4
unitig_87.g27955 Utricularia gibba HOM05D008105 ORTHO05D010309 2.8e-17 93.6 47 89.4
SHI53302 Sapria himalayana HOM05D008105 ORTHO05D010309 3.7e-17 93.2 44 93.2
ClCG02G013160 Citrullus lanatus HOM05D008105 ORTHO05D010309 4.8e-17 92.8 95 52.6
DCAR_028367 Daucus carota HOM05D008105 ORTHO05D010309 4.8e-17 92.8 41 100.0
Nitab4.5_0000886g0210 Nicotiana tabacum HOM05D008105 ORTHO05D010309 4.8e-17 92.8 47 85.1
GSVIVG01013601001 Vitis vinifera HOM05D008105 ORTHO05D010309 1.1e-16 91.7 44 93.2
CsaV3_UNG208290 Cucumis sativus L. HOM05D008105 ORTHO05D010309 1.4e-16 91.3 44 90.9
CsaV3_UNG208900 Cucumis sativus L. HOM05D008105 ORTHO05D010309 1.4e-16 91.3 44 90.9
Migut.I00280 Erythranthe guttata HOM05D008105 ORTHO05D010309 1.8e-16 90.9 45 88.9
arahy.Tifrunner.gnm1.ann1.CS557D Arachis hypogaea HOM05D008105 ORTHO05D010309 3.1e-16 90.1 44 88.6
C04p19700 Brassica napus HOM05D008105 ORTHO05D010309 4.0e-16 89.7 44 88.6
Potri.007G062282 Populus trichocarpa HOM05D008105 ORTHO05D010309 5.3e-16 89.4 44 90.9
SHI46576 Sapria himalayana HOM05D008105 ORTHO05D010309 5.3e-16 89.4 44 90.9
SHI47522 Sapria himalayana HOM05D008105 ORTHO05D010309 5.3e-16 89.4 44 90.9
SHI54884 Sapria himalayana HOM05D008105 ORTHO05D010309 1.5e-15 87.8 44 88.6
Lsat_1_v5_gn_5_16381 Lactuca sativa HOM05D008105 ORTHO05D010309 1.7e-14 84.3 47 83.0
Hma1.2p1_1191F.1_g265450 Hydrangea macrophylla HOM05D008105 ORTHO05D010309 2.9e-14 83.6 47 78.7
Lsat_1_v5_gn_4_65960 Lactuca sativa HOM05D008105 ORTHO05D010309 6.4e-14 82.4 41 87.8
SGA_v2.0_scaffold575G52978 Striga asiatica HOM05D010275 ORTHO05D012627 6.4e-14 82.4 65 69.2
ClCG06G007950 Citrullus lanatus HOM05D008105 ORTHO05D010309 1.9e-13 80.9 47 76.6
TPR.G25507 Trifolium pratense HOM05D008105 ORTHO05D010309 2.7e-12 77.0 38 86.8
TPR.G23916 Trifolium pratense HOM05D008105 ORTHO05D010309 6.0e-12 75.9 38 86.8
Nitab4.5_0002418g0140 Nicotiana tabacum HOM05D008105 ORTHO05D010309 1.0e-11 75.1 41 82.9
Nitab4.5_0006089g0080 Nicotiana tabacum HOM05D008105 ORTHO05D010309 1.3e-11 74.7 36 91.7
Dinv06662 Davidia involucrata HOM05D008105 ORTHO05D010309 3.9e-11 73.2 40 87.5
Dinv06742 Davidia involucrata HOM05D008105 ORTHO05D010309 3.9e-11 73.2 40 87.5
Nitab4.5_0006806g0130 Nicotiana tabacum HOM05D008105 ORTHO05D010309 3.9e-11 73.2 59 61.0
SHI14716 Sapria himalayana HOM05D008105 ORTHO05D010309 3.9e-11 73.2 36 91.7
arahy.Tifrunner.gnm1.ann1.DTZ4L4 Arachis hypogaea HOM05D008105 ORTHO05D010309 8.7e-11 72.0 53 64.2
Nitab4.5_0008578g0040 Nicotiana tabacum HOM05D008105 ORTHO05D010309 3.3e-10 70.1 60 60.0
Nitab4.5_0000172g1030 Nicotiana tabacum HOM05D008105 ORTHO05D010309 5.6e-10 69.3 34 88.2
Nitab4.5_0000031g0160 Nicotiana tabacum HOM05D008105 ORTHO05D010309 4.8e-09 66.2 44 70.5
GSVIVG01014508001 Vitis vinifera HOM05D008105 ORTHO05D010309 6.2e-09 65.9 31 96.8
Nitab4.5_0001607g0060 Nicotiana tabacum HOM05D008105 ORTHO05D010309 1.4e-08 64.7 36 80.6
Gohir.D01G116732 Gossypium hirsutum HOM05D008105 ORTHO05D010309 2.4e-08 63.9 37 75.7
Nitab4.5_0002095g0030 Nicotiana tabacum HOM05D008105 ORTHO05D010309 6.9e-08 62.4 31 87.1
SHI43693 Sapria himalayana HOM05D008105 ORTHO05D010309 6.5e-06 55.8 27 81.5
Migut.H01107 Erythranthe guttata HOM05D008105 ORTHO05D010309 8.4e-06 55.5 31 80.6


User provided reference genes

Program Settings