Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold255G45499 Striga asiatica HOM05D001560 ORTHO05D010994 2.9e-128 461.8 227 100.0
SalBow1G3143 Salvia bowleyana HOM05D009805 ORTHO05D010994 2.5e-55 219.5 105 99.0
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 1.1e-45 187.6 88 100.0
SalBow1G2595 Salvia bowleyana HOM05D009805 ORTHO05D010994 1.2e-44 184.1 86 100.0
Sed0019140 Sechium edule HOM05D009805 ORTHO05D010994 4.2e-42 175.6 103 83.5
Hund12882 Selenicereus undatus HOM05D009805 ORTHO05D010994 3.4e-31 139.4 100 73.0
Nn1g10044 Nelumbo nucifera HOM05D009805 ORTHO05D010994 1.3e-30 137.5 88 78.4
Nitab4.5_0000844g0180 Nicotiana tabacum HOM05D008793 ORTHO05D010994 1.8e-24 117.1 94 67.0
Nitab4.5_0000886g0220 Nicotiana tabacum HOM05D008793 ORTHO05D010994 1.5e-23 114.0 92 65.2
Lsat_1_v5_gn_9_45601 Lactuca sativa HOM05D007877 ORTHO05D009957 1.7e-22 110.5 63 85.7
SabraMtG0009500 Salix brachista HOM05D001560 ORTHO05D010994 2.2e-22 110.2 69 79.7
Cpa.g.sc89.21 Carica papaya HOM05D009805 ORTHO05D010994 5.4e-21 105.5 97 61.9
SHI35290 Sapria himalayana HOM05D000743 ORTHO05D000580 1.0e-19 101.3 67 74.6
CAN.G85.16 Capsicum annuum HOM05D001560 ORTHO05D010994 6.6e-19 98.6 57 82.5
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-18 97.4 95 54.7
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-18 97.4 95 54.7
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 2.5e-18 96.7 60 80.0
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 2.5e-18 96.7 51 90.2
SHI37136 Sapria himalayana HOM05D001560 ORTHO05D003613 3.3e-18 96.3 60 80.0
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 3.3e-18 96.3 60 80.0
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 3.3e-18 96.3 67 71.6
TPR.G39706 Trifolium pratense HOM05D001560 ORTHO05D003613 4.3e-18 95.9 51 90.2
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 9.5e-18 94.7 51 90.2
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.6e-17 94.0 51 88.2
Hund12885 Selenicereus undatus HOM05D009805 ORTHO05D010994 2.1e-17 93.6 56 80.4
Hund27585 Selenicereus undatus HOM05D009805 ORTHO05D010994 2.1e-17 93.6 56 80.4
Hund27815 Selenicereus undatus HOM05D009805 ORTHO05D010994 2.1e-17 93.6 56 80.4
Hund27901 Selenicereus undatus HOM05D009805 ORTHO05D010994 2.1e-17 93.6 56 80.4
Hund28070 Selenicereus undatus HOM05D009805 ORTHO05D010994 2.1e-17 93.6 56 80.4
Hund28081 Selenicereus undatus HOM05D009805 ORTHO05D010994 2.1e-17 93.6 56 80.4
Hund28865 Selenicereus undatus HOM05D009805 ORTHO05D010994 2.1e-17 93.6 56 80.4
Hund28884 Selenicereus undatus HOM05D009805 ORTHO05D010994 2.1e-17 93.6 56 80.4
Hund29204 Selenicereus undatus HOM05D009805 ORTHO05D010994 2.1e-17 93.6 56 80.4
Hund29342 Selenicereus undatus HOM05D009805 ORTHO05D010994 2.1e-17 93.6 56 80.4
Nitab4.5_0000081g0010 Nicotiana tabacum HOM05D001560 ORTHO05D010994 3.6e-17 92.8 47 93.6
RhsimMtG0005600 Rhododendron simsii HOM05D009805 ORTHO05D010994 4.7e-17 92.4 139 44.6
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 4.7e-17 92.4 60 76.7
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 4.7e-17 92.4 44 97.7
C04p19590 Brassica napus HOM05D007877 ORTHO05D009957 6.1e-17 92.0 50 88.0
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 8.0e-17 91.7 60 76.7
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 8.0e-17 91.7 79 60.8
Peaxi162Scf00827g00511 Petunia axillaris HOM05D001560 ORTHO05D010994 1.0e-16 91.3 43 97.7
SHI35001 Sapria himalayana HOM05D001560 ORTHO05D010994 1.4e-16 90.9 50 86.0
arahy.Tifrunner.gnm1.ann1.IE22H8 Arachis hypogaea HOM05D009805 ORTHO05D010994 1.8e-16 90.5 53 83.0
arahy.Tifrunner.gnm1.ann1.KWS21K Arachis hypogaea HOM05D009805 ORTHO05D010994 1.8e-16 90.5 53 83.0
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 3.0e-16 89.7 44 95.5
Nitab4.5_0000010g0230 Nicotiana tabacum HOM05D007877 ORTHO05D009957 4.0e-16 89.4 52 82.7
SHI39990 Sapria himalayana HOM05D001560 ORTHO05D010994 5.2e-16 89.0 51 84.3
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-15 87.8 51 82.4
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-15 87.8 58 75.9
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-15 87.8 53 81.1
SHI36773 Sapria himalayana HOM05D001560 ORTHO05D010994 2.6e-15 86.7 51 82.4
SHI36784 Sapria himalayana HOM05D001560 ORTHO05D010994 2.6e-15 86.7 51 82.4
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-15 86.7 44 93.2
SHI50746 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-15 86.7 44 93.2
arahy.Tifrunner.gnm1.ann1.WM32N3 Arachis hypogaea HOM05D009805 ORTHO05D010994 4.4e-15 85.9 43 95.3
SHI50439 Sapria himalayana HOM05D001560 ORTHO05D010994 5.7e-15 85.5 58 74.1
SHI35000 Sapria himalayana HOM05D001560 ORTHO05D003613 7.5e-15 85.1 57 75.4
CAN.G745.34 Capsicum annuum HOM05D009805 ORTHO05D010994 9.8e-15 84.7 53 79.2
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-14 84.3 44 90.9
Peaxi162Scf00348g00058 Petunia axillaris HOM05D002965 ORTHO05D010994 2.9e-14 83.2 54 74.1
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 6.4e-14 82.0 76 60.5
Ca_26709_v3 Cicer arietinum L. HOM05D010881 ORTHO05D026827 8.3e-14 81.6 97 53.6
TPR.G23491 Trifolium pratense HOM05D007877 ORTHO05D009957 1.1e-13 81.3 45 86.7
SHI39121 Sapria himalayana HOM05D000743 ORTHO05D000580 3.2e-13 79.7 64 67.2
SHI44092 Sapria himalayana HOM05D001560 ORTHO05D010994 9.2e-13 78.2 51 78.4
SHI51797 Sapria himalayana HOM05D001560 ORTHO05D003613 9.2e-13 78.2 51 78.4
Hma1.2p1_0079F.1_g041890 Hydrangea macrophylla HOM05D009805 ORTHO05D010994 2.0e-12 77.0 34 97.1
Hma1.2p1_3126F.1_g332910 Hydrangea macrophylla HOM05D009805 ORTHO05D010994 2.0e-12 77.0 34 97.1
SHI34995 Sapria himalayana HOM05D001560 ORTHO05D010994 7.8e-12 75.1 44 84.1
SHI38900 Sapria himalayana HOM05D000743 ORTHO05D000580 2.3e-11 73.6 45 80.0
CAN.G362.38 Capsicum annuum HOM05D002965 ORTHO05D010994 3.0e-11 73.2 45 77.8
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 3.0e-11 73.2 36 94.4
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 3.0e-11 73.2 36 91.7
Nitab4.5_0012260g0050 Nicotiana tabacum HOM05D008793 ORTHO05D010994 5.0e-11 72.4 53 71.7
SHI36572 Sapria himalayana HOM05D001560 ORTHO05D010994 5.0e-11 72.4 45 77.8
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 6.6e-11 72.0 53 71.7
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-10 70.9 46 76.1
Nitab4.5_0001681g0060 Nicotiana tabacum HOM05D007877 ORTHO05D009957 3.6e-09 66.2 31 93.5
Solyc00g500237.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.8e-08 63.9 30 93.3
EL10Ac8g19721 Beta vulgaris HOM05D007877 ORTHO05D009957 2.3e-08 63.5 42 76.2
Peaxi162Scf00508g00001 Petunia axillaris HOM05D007877 ORTHO05D009957 2.3e-08 63.5 29 96.6
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 4.0e-08 62.8 33 84.8
Nitab4.5_0000307g0310 Nicotiana tabacum HOM05D011634 ORTHO05D012151 2.0e-07 60.5 27 96.3
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 7.5e-07 58.5 60 55.0


User provided reference genes

Program Settings