Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold255G45438 Striga asiatica HOM05D002660 ORTHO05D003902 2.7e-146 521.9 256 100.0
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 8.4e-31 138.3 186 42.5
arahy.Tifrunner.gnm1.ann1.DD5JWP Arachis hypogaea HOM05D002660 ORTHO05D003902 9.6e-27 124.8 158 43.0
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 3.1e-25 119.8 156 41.7
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.1e-25 119.8 171 42.1
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.1e-25 119.8 171 42.1
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.1e-25 119.8 171 42.1
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.1e-25 119.8 171 42.1
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 3.1e-25 119.8 171 42.1
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 3.1e-25 119.8 171 42.1
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 4.0e-25 119.4 169 41.4
RcHm_v2.0_MTg0498601 Rosa chinensis HOM05D002660 ORTHO05D003902 1.2e-24 117.9 141 44.7
Cpa.g.sc263.8 Carica papaya HOM05D002660 ORTHO05D003902 1.5e-24 117.5 146 43.2
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 2.6e-24 116.7 153 44.4
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 1.4e-22 110.9 139 44.6
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 1.4e-22 110.9 139 44.6
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 1.9e-22 110.5 152 42.8
arahy.Tifrunner.gnm1.ann1.4WR8AK Arachis hypogaea HOM05D002660 ORTHO05D003902 4.2e-22 109.4 111 49.5
arahy.Tifrunner.gnm1.ann1.64IP8W Arachis hypogaea HOM05D002660 ORTHO05D003902 4.2e-22 109.4 111 49.5
arahy.Tifrunner.gnm1.ann1.MHP2RT Arachis hypogaea HOM05D002660 ORTHO05D003902 4.2e-22 109.4 111 49.5
arahy.Tifrunner.gnm1.ann1.RJKU2P Arachis hypogaea HOM05D002660 ORTHO05D003902 4.2e-22 109.4 111 49.5
Solyc11g063530.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 5.5e-22 109.0 92 53.3
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 7.1e-22 108.6 130 44.6
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 9.3e-22 108.2 149 43.0
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 9.3e-22 108.2 149 43.0
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 9.3e-22 108.2 149 43.0
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 9.3e-22 108.2 149 43.0
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 4.6e-21 105.9 151 43.0
CAN.G85.19 Capsicum annuum HOM05D002660 ORTHO05D003902 7.9e-21 105.1 122 46.7
Sopen05g012700 Solanum pennellii HOM05D002660 ORTHO05D000001 7.9e-21 105.1 80 62.5
arahy.Tifrunner.gnm1.ann1.PGW3V5 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.3e-20 104.4 95 52.6
arahy.Tifrunner.gnm1.ann1.UMNW15 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.3e-20 104.4 95 52.6
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 1.3e-20 104.4 133 42.9
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 7.4e-19 98.6 118 44.1
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 7.4e-19 98.6 118 44.1
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 7.4e-19 98.6 118 44.1
Sed0005295 Sechium edule HOM05D002660 ORTHO05D003902 7.4e-19 98.6 89 53.9
arahy.Tifrunner.gnm1.ann1.1F9GAV Arachis hypogaea HOM05D002660 ORTHO05D003902 9.7e-19 98.2 109 48.6
SGA_v2.0_scaffold400G50856 Striga asiatica HOM05D002660 ORTHO05D003902 9.7e-19 98.2 108 44.4
BraSC177t45771Z Brassica rapa HOM05D002660 ORTHO05D003902 1.3e-18 97.8 127 44.1
BraSC48t46265Z Brassica rapa HOM05D002660 ORTHO05D003902 1.3e-18 97.8 127 44.1
BolC6t36210H Brassica oleracea HOM05D002660 ORTHO05D003902 4.8e-18 95.9 105 48.6
Aa31csc1168G10 Aethionema arabicum HOM05D002660 ORTHO05D003902 8.2e-18 95.1 89 47.2
unitig_87.g28008 Utricularia gibba HOM05D002660 ORTHO05D003902 4.1e-17 92.8 139 36.0
Lj2A1234T113 Lonicera japonica HOM05D002660 ORTHO05D003902 2.6e-16 90.1 93 46.2
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 1.9e-14 84.0 87 47.1
Lj2P1228T81 Lonicera japonica HOM05D011380 ORTHO05D019448 3.2e-14 83.2 81 48.1
SGA_v2.0_scaffold400G50852 Striga asiatica HOM05D000388 ORTHO05D000473 9.4e-14 81.6 149 32.9
COL.COLO4_04088 Corchorus olitorius HOM05D002660 ORTHO05D003902 2.7e-13 80.1 104 39.4
COL.COLO4_02507 Corchorus olitorius HOM05D002660 ORTHO05D003902 4.6e-13 79.3 103 46.6
ATR0661G179 Amborella trichopoda HOM05D002660 ORTHO05D003902 1.8e-12 77.4 76 50.0
BcaC05g27131 Brassica carinata HOM05D002660 ORTHO05D003902 1.8e-12 77.4 105 41.9
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 2.3e-12 77.0 66 48.5
SGA_v2.0_scaffold507G52551 Striga asiatica HOM05D002660 ORTHO05D003902 5.1e-12 75.9 66 56.1
Nn1g10106 Nelumbo nucifera HOM05D002660 ORTHO05D003902 1.1e-11 74.7 109 39.4
Nn1g10197 Nelumbo nucifera HOM05D002660 ORTHO05D003902 1.1e-11 74.7 109 39.4
vmacro00721 Vaccinium macrocarpon HOM05D005420 ORTHO05D006524 2.0e-11 73.9 59 55.9
ATR0575G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 2.5e-11 73.6 57 57.9
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 2.5e-11 73.6 99 44.4
Sopen11g018230 Solanum pennellii HOM05D002660 ORTHO05D003902 4.3e-11 72.8 108 38.9
CAN.G72.10 Capsicum annuum HOM05D002660 ORTHO05D003902 5.7e-11 72.4 97 45.4
SabraMtG0005500 Salix brachista HOM05D002660 ORTHO05D003902 9.7e-11 71.6 58 55.2
CAN.G1109.11 Capsicum annuum HOM05D002660 ORTHO05D003902 1.7e-10 70.9 99 43.4
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 2.2e-10 70.5 99 43.4
arahy.Tifrunner.gnm1.ann1.FFDS4S Arachis hypogaea HOM05D002660 ORTHO05D003902 2.8e-10 70.1 84 39.3
CARHR283370 Cardamine hirsuta HOM05D002660 ORTHO05D003902 2.8e-10 70.1 103 41.7
ATMG01110 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 3.7e-10 69.7 103 40.8
Solyc03g063470.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.7e-10 69.7 99 42.4
CAN.G85.22 Capsicum annuum HOM05D002660 ORTHO05D003902 1.1e-09 68.2 96 42.7
Oeu030614.1 Olea europaea HOM05D024339 ORTHO05D016276 1.4e-09 67.8 84 51.2
MBI14_g38258_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 2.4e-09 67.0 88 43.2
Lj5g0008059 Lotus japonicus HOM05D002660 ORTHO05D003902 4.1e-09 66.2 78 44.9
Nitab4.5_0001788g0280 Nicotiana tabacum HOM05D011554 ORTHO05D019309 4.1e-09 66.2 56 64.3
PGSC0003DMG400001137 Solanum tuberosum HOM05D002660 ORTHO05D003902 5.3e-09 65.9 106 41.5
CAN.G999.39 Capsicum annuum HOM05D002660 ORTHO05D003902 6.9e-09 65.5 99 41.4
CAN.G505.3 Capsicum annuum HOM05D002660 ORTHO05D003902 9.1e-09 65.1 73 46.6
Nitab4.5_0001796g0110 Nicotiana tabacum HOM05D011554 ORTHO05D019309 1.2e-08 64.7 53 64.2
arahy.Tifrunner.gnm1.ann1.2INJ5A Arachis hypogaea HOM05D002660 ORTHO05D003902 1.5e-08 64.3 92 37.0
GSVIVG01029663001 Vitis vinifera HOM05D002660 ORTHO05D003902 1.5e-08 64.3 93 37.6
Solyc00g142170.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.0e-08 63.9 106 41.5
Solyc00g500255.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.0e-08 63.9 106 41.5
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 2.0e-08 63.9 57 52.6
Sed0020463 Sechium edule HOM05D002660 ORTHO05D003902 2.6e-08 63.5 100 38.0
CAN.G505.14 Capsicum annuum HOM05D000743 ORTHO05D000580 3.4e-08 63.2 125 36.8
Glyma.08G300900 Glycine max HOM05D002660 ORTHO05D003902 3.4e-08 63.2 79 41.8
Gohir.A06G098104 Gossypium hirsutum HOM05D002660 ORTHO05D003902 3.4e-08 63.2 142 32.4
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 3.4e-08 63.2 119 37.0
AT2G07749 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 5.9e-08 62.4 97 38.1
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 5.9e-08 62.4 45 53.3
ATMG01410 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 7.7e-08 62.0 99 37.4
SGA_v2.0_scaffold479G52276 Striga asiatica HOM05D002660 ORTHO05D003902 7.7e-08 62.0 45 55.6
Lsat_1_v5_gn_5_13340 Lactuca sativa HOM05D002660 ORTHO05D003902 1.0e-07 61.6 90 36.7
Lsat_1_v5_gn_5_172580 Lactuca sativa HOM05D002660 ORTHO05D003902 1.0e-07 61.6 90 36.7
Lalb_Chr00c24g0406851 Lupinus albus HOM05D002660 ORTHO05D003902 1.3e-07 61.2 42 69.0
Nitab4.5_0000031g0170 Nicotiana tabacum HOM05D011554 ORTHO05D019309 1.3e-07 61.2 38 84.2
Nitab4.5_0003481g0040 Nicotiana tabacum HOM05D011554 ORTHO05D019309 1.7e-07 60.8 56 58.9
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 2.2e-07 60.5 102 38.2
Glyma.12G175100 Glycine max HOM05D002660 ORTHO05D003902 2.9e-07 60.1 87 42.5
MBI14_g38700_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 2.9e-07 60.1 115 32.2
MBI14_g38260_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 6.5e-07 58.9 109 31.2
TAR626G0574 Trochodendron aralioides HOM05D002660 ORTHO05D003902 1.9e-06 57.4 133 33.8
Lalb_Chr00c24g0406811 Lupinus albus HOM05D002660 ORTHO05D003902 2.5e-06 57.0 54 48.1
Solyc10g047100.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.5e-06 57.0 73 45.2
SGA_v2.0_scaffold420G51422 Striga asiatica HOM05D002660 ORTHO05D019448 2.5e-06 57.0 50 50.0
Lsat_1_v5_gn_8_124640 Lactuca sativa HOM05D002660 ORTHO05D003902 5.5e-06 55.8 45 51.1
Lsat_1_v5_gn_8_93860 Lactuca sativa HOM05D002660 ORTHO05D003902 5.5e-06 55.8 45 51.1
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 7.2e-06 55.5 53 56.6
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 7.2e-06 55.5 53 56.6


User provided reference genes

Program Settings