Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold255G45349 Striga asiatica HOM05D000003 ORTHO05D000004 2.1e-114 415.6 201 100.0
PGSC0003DMG400018454 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.2e-09 65.9 60 41.7
CANSAT11G0144 Cannabis sativa HOM05D000003 ORTHO05D000283 4.6e-08 62.4 62 40.3
ECA246G2325 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.0e-07 61.2 103 30.1
ECA246G2520 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.3e-07 60.1 107 30.8
CANSAT35G2031 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-07 59.7 77 35.1
CANSAT35G0418 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-07 58.9 56 41.1
ECA234G3060 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.1e-07 58.9 53 45.3
CANSAT51G0001 Cannabis sativa HOM05D000003 ORTHO05D000004 6.7e-07 58.5 56 37.5
CANSAT21G2563 Cannabis sativa HOM05D000003 ORTHO05D000004 8.7e-07 58.2 57 38.6
Sopen00g013340 Solanum pennellii HOM05D000003 ORTHO05D000004 8.7e-07 58.2 71 36.6
CANSAT01G0106 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.8 53 39.6
TPR.G25418 Trifolium pratense HOM05D000003 ORTHO05D000004 1.1e-06 57.8 52 42.3
ECA232G1848 Erigeron canadensis HOM05D000006 ORTHO05D000004 1.5e-06 57.4 107 32.7
Sopen12g011790 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-06 57.4 54 42.6
CANSAT56G0236 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-06 57.0 56 37.5
CANSAT78G0053 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-06 57.0 60 36.7
ECA153G0011 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.9e-06 57.0 61 37.7
ECA233G5827 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.9e-06 57.0 66 39.4
Sopen00g005620 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-06 57.0 59 39.0
Sopen00g014270 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-06 57.0 59 39.0
TPR.G13276 Trifolium pratense HOM05D000003 ORTHO05D000004 1.9e-06 57.0 52 44.2
CANSAT25G1042 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-06 56.6 60 36.7
ECA233G2180 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.5e-06 56.6 58 43.1
ECA240G1361 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.5e-06 56.6 57 38.6
Sopen00g006610 Solanum pennellii HOM05D000003 ORTHO05D000004 2.5e-06 56.6 54 40.7
CANSAT21G0251 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-06 56.2 53 39.6
ECA233G0113 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.3e-06 56.2 68 38.2
ECA238G3143 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.3e-06 56.2 61 44.3
ECA246G0046 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.3e-06 56.2 53 37.7
Sopen00g008600 Solanum pennellii HOM05D000003 ORTHO05D000004 3.3e-06 56.2 59 39.0
TPR.G10510 Trifolium pratense HOM05D000003 ORTHO05D000004 3.3e-06 56.2 50 44.0
CANSAT01G0114 Cannabis sativa HOM05D000003 ORTHO05D000283 4.3e-06 55.8 57 36.8
CANSAT21G2299 Cannabis sativa HOM05D000003 ORTHO05D000004 4.3e-06 55.8 57 42.1
CANSAT80G2603 Cannabis sativa HOM05D000003 ORTHO05D000004 4.3e-06 55.8 57 42.1
ECA232G4711 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.3e-06 55.8 63 38.1
HanXRQChr09g0251031 Helianthus annuus HOM05D000003 ORTHO05D000004 4.3e-06 55.8 54 42.6
Sopen00g004290 Solanum pennellii HOM05D000003 ORTHO05D000004 4.3e-06 55.8 54 40.7
ECA191G0012 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.6e-06 55.5 53 37.7
Medtr3g012410 Medicago truncatula HOM05D000003 ORTHO05D000004 5.6e-06 55.5 50 44.0
Rhsim08G0197000 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.6e-06 55.5 53 35.8
CANSAT11G0046 Cannabis sativa HOM05D000003 ORTHO05D000004 7.4e-06 55.1 53 39.6
CANSAT11G1009 Cannabis sativa HOM05D000003 ORTHO05D000004 7.4e-06 55.1 58 32.8
CANSAT11G1529 Cannabis sativa HOM05D000003 ORTHO05D000004 7.4e-06 55.1 56 33.9
CANSAT80G1694 Cannabis sativa HOM05D000003 ORTHO05D000004 7.4e-06 55.1 53 37.7
HanXRQChr08g0236191 Helianthus annuus HOM05D000003 ORTHO05D000004 7.4e-06 55.1 52 44.2
Sopen00g011320 Solanum pennellii HOM05D000003 ORTHO05D000004 7.4e-06 55.1 59 37.3
Ah.03g142580 Amaranthus hybridus HOM05D000003 ORTHO05D000004 9.6e-06 54.7 76 36.8
CANSAT01G0969 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-06 54.7 48 39.6
CANSAT64G1318 Cannabis sativa HOM05D000003 ORTHO05D000283 9.6e-06 54.7 54 37.0
CANSAT80G1810 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-06 54.7 57 35.1
HanXRQChr15g0494971 Helianthus annuus HOM05D000003 ORTHO05D000004 9.6e-06 54.7 53 39.6
Sopen10g008120 Solanum pennellii HOM05D000003 ORTHO05D000004 9.6e-06 54.7 54 38.9


User provided reference genes

Program Settings