Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 1.8e-311 1071.6 523 100.0
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 3.4e-220 768.5 459 80.6
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 2.7e-217 758.8 456 79.4
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 6.2e-206 721.1 456 75.0
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 1.0e-200 703.7 436 76.6
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 1.3e-200 703.4 449 74.2
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 3.7e-198 695.3 463 71.3
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 3.7e-198 695.3 474 71.3
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 1.1e-197 693.7 458 72.1
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 5.8e-196 688.0 474 71.1
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 5.8e-196 688.0 462 71.2
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.3e-195 686.8 458 72.5
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.1e-194 683.7 458 71.6
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 1.9e-194 682.9 452 71.7
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 3.2e-194 682.2 439 73.1
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 4.2e-194 681.8 456 69.7
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 7.1e-194 681.0 440 72.7
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 1.2e-193 680.2 456 70.6
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.6e-193 679.9 456 69.5
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 2.1e-193 679.5 448 72.1
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 4.6e-193 678.3 447 72.3
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 7.9e-193 677.6 441 71.9
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 1.3e-192 676.8 440 72.5
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 5.1e-192 674.9 439 72.9
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 6.7e-192 674.5 464 69.4
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 8.7e-192 674.1 440 71.4
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.1e-191 673.7 456 69.1
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 1.9e-191 672.9 456 70.4
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 3.3e-191 672.2 460 72.8
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 1.6e-190 669.8 440 71.1
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 2.1e-190 669.5 440 70.7
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 2.8e-190 669.1 440 71.4
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 3.7e-190 668.7 450 70.9
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 4.8e-190 668.3 438 71.2
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 8.2e-190 667.5 440 73.0
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 1.4e-189 666.8 456 69.7
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 5.3e-189 664.8 448 70.1
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 6.9e-189 664.5 440 70.7
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 4.5e-188 661.8 442 70.6
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 1.0e-187 660.6 449 70.4
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 4.2e-186 655.2 442 69.5
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 1.2e-185 653.7 433 70.4
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 5.1e-184 648.3 442 70.4
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 8.7e-184 647.5 441 69.2
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.5e-183 646.7 442 70.1
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 5.7e-183 644.8 440 68.6
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 7.4e-183 644.4 442 69.5
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 4.8e-182 641.7 447 69.6
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 1.4e-181 640.2 440 68.2
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 1.8e-181 639.8 457 68.3
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 2.6e-180 636.0 449 67.5
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 3.4e-180 635.6 449 65.9
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 1.3e-179 633.6 449 67.0
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 2.2e-179 632.9 465 66.2
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 5.0e-179 631.7 449 66.8
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 6.5e-179 631.3 445 67.9
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 1.1e-178 630.6 458 67.7
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 1.4e-178 630.2 437 68.2
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 2.5e-178 629.4 437 67.7
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 3.2e-178 629.0 449 65.9
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 4.2e-178 628.6 457 68.1
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 2.1e-177 626.3 445 66.5
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 2.7e-177 625.9 449 66.4
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 7.9e-177 624.4 444 66.9
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 2.3e-176 622.9 440 68.0
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 2.3e-176 622.9 440 68.0
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 1.1e-175 620.5 440 67.7
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 2.5e-175 619.4 440 67.3
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 2.2e-174 616.3 468 64.7
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 2.2e-171 606.3 442 67.4
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 2.2e-171 606.3 419 69.2
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 6.5e-171 604.7 446 65.5
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 1.1e-170 604.0 443 67.9
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 1.9e-170 603.2 471 62.8
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 4.2e-170 602.1 375 74.7
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 5.5e-170 601.7 376 75.8
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 6.1e-169 598.2 474 61.2
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 1.0e-168 597.4 441 64.9
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 2.2e-166 589.7 465 63.0
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 1.4e-165 587.0 453 63.4
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 5.3e-165 585.1 440 63.6
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 9.1e-165 584.3 398 68.6
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 1.7e-163 580.1 397 67.8
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 1.7e-163 580.1 395 70.1
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 2.9e-163 579.3 453 62.7
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 2.0e-159 566.6 404 66.8
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 2.6e-159 566.2 365 71.2
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 9.1e-157 557.8 451 59.4
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 3.8e-155 552.4 448 61.6
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 2.5e-154 549.7 448 60.7
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 3.3e-151 539.3 443 58.9
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 7.0e-149 531.6 441 59.6
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 3.5e-148 529.3 343 72.9
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 4.4e-143 512.3 447 57.9
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 3.0e-136 489.6 386 62.2
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 4.6e-124 449.1 445 52.4
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 5.2e-112 409.1 285 69.1
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 8.7e-99 365.2 222 78.4
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 3.6e-97 359.8 480 42.5
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 1.2e-92 344.7 392 45.4
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 6.6e-91 339.0 226 73.0
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 3.3e-90 336.7 466 41.6
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 7.3e-90 335.5 269 65.8
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 7.9e-84 315.5 229 64.2
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 7.6e-79 298.9 331 52.0
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 3.7e-73 280.0 230 59.1
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 1.6e-68 264.6 159 74.2
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 5.7e-58 229.6 165 68.5
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 3.6e-44 183.7 128 68.0
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 4.2e-37 160.2 219 42.0
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 4.7e-28 130.2 133 50.4
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 1.8e-24 118.2 75 73.3
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 1.2e-23 115.5 70 72.9
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.6e-23 115.2 93 55.9
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 4.5e-23 113.6 80 70.0
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 6.8e-19 99.8 96 45.8
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 8.9e-19 99.4 85 64.7
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 8.9e-19 99.4 130 46.9
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 2.2e-09 68.2 78 43.6
SGA_v2.0_scaffold9G04918 Striga asiatica HOM05D000397 ORTHO05D000492 6.0e-07 60.1 31 83.9


User provided reference genes

Program Settings